RNA–Protein interactions for RNA: ENSMUST00000106791.7

Trim3-203, Transcript of Tripartite motif-containing protein 3, mousemouse

TSL 1 (best) BASIC

Gene Trim3, Length 2,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-203ENSMUST00000106791 Vpreb2P13373 142 aa12.18□□□□□ -0.46
Trim3-203ENSMUST00000106791 Hectd4E9Q2E4 4418 aa12.18□□□□□ -0.46
Trim3-203ENSMUST00000106791 Defa28D3Z1V9 94 aa12.17□□□□□ -0.46
Trim3-203ENSMUST00000106791 A0A286YE02 88 aa12.17□□□□□ -0.46
Trim3-203ENSMUST00000106791 Ccdc179J3QM76 67 aa12.15□□□□□ -0.46
Trim3-203ENSMUST00000106791 HrnrQ8VHD8 2496 aa12.15□□□□□ -0.46
Trim3-203ENSMUST00000106791 Igkv8-26A0A075B5N5 123 aa12.15□□□□□ -0.46
Trim3-203ENSMUST00000106791 Vpreb3D3Z6J4 130 aa12.15□□□□□ -0.46
Trim3-203ENSMUST00000106791 Gm20726G3UX18 150 aa12.14□□□□□ -0.47
Trim3-203ENSMUST00000106791 9530003J23RikQ8BM26 151 aa12.14□□□□□ -0.47
Trim3-203ENSMUST00000106791 Defb39Q70KL3 74 aa12.13□□□□□ -0.47
Trim3-203ENSMUST00000106791 Rpl37aP61514 92 aa12.13□□□□□ -0.47
Trim3-203ENSMUST00000106791 Wfdc13Q5DQQ6 81 aa12.12□□□□□ -0.47
Trim3-203ENSMUST00000106791 Vpreb1P13372 142 aa12.11□□□□□ -0.47
Trim3-203ENSMUST00000106791 Igkv3-5A0A140T8M6 119 aa12.1□□□□□ -0.47
Trim3-203ENSMUST00000106791 Kmt2cQ8BRH4 4903 aa12.09□□□□□ -0.47
Trim3-203ENSMUST00000106791 Gm10767Q3TQP0 103 aa12.09□□□□□ -0.47
Trim3-203ENSMUST00000106791 Odf3bQ5M8M2 238 aa12.09□□□□□ -0.47
Trim3-203ENSMUST00000106791 Gm7102J3QQ10 178 aa12.09□□□□□ -0.47
Trim3-203ENSMUST00000106791 Lamtor3O88653 124 aa12.09□□□□□ -0.47
Trim3-203ENSMUST00000106791 Ifitm6A0A1B0GS75 124 aa12.08□□□□□ -0.48
Trim3-203ENSMUST00000106791 A830005F24RikQ8BRT5 167 aa12.08□□□□□ -0.48
Trim3-203ENSMUST00000106791 Pkhd1l1Q80ZA4 4249 aa12.06□□□□□ -0.48
Trim3-203ENSMUST00000106791 Vps13bQ80TY5 3993 aa12.05□□□□□ -0.48
Trim3-203ENSMUST00000106791 Gm37389A0A0A6YW05 95 aa12.05□□□□□ -0.48
Trim3-203ENSMUST00000106791 Vps25Q9CQ80 176 aa12.05□□□□□ -0.48
Trim3-203ENSMUST00000106791 Dnah8Q91XQ0 4731 aa12.05□□□□□ -0.48
Trim3-203ENSMUST00000106791 Gm10401E9Q3K6 71 aa12.04□□□□□ -0.48
Trim3-203ENSMUST00000106791 Znf706Q9D115 76 aaKnown RBP12.04□□□□□ -0.48
Trim3-203ENSMUST00000106791 Ighv10-3A0A075B5T6 119 aa12.04□□□□□ -0.48
Trim3-203ENSMUST00000106791 RetnlbQ99P86 105 aa12.04□□□□□ -0.48
Trim3-203ENSMUST00000106791 Fat2Q5F226 4351 aa12.03□□□□□ -0.48
Trim3-203ENSMUST00000106791 Bean1Q9EQG5 255 aa12.02□□□□□ -0.48
Trim3-203ENSMUST00000106791 Mrpl55Q9CZ83 127 aa12.01□□□□□ -0.49
Trim3-203ENSMUST00000106791 P06320 134 aa12□□□□□ -0.49
Trim3-203ENSMUST00000106791 Sfta2E9PXB6 77 aa12□□□□□ -0.49
Trim3-203ENSMUST00000106791 Igf1P05017 153 aa12□□□□□ -0.49
Trim3-203ENSMUST00000106791 Igkv8-27A0A0G2JF28 120 aa11.98□□□□□ -0.49
Trim3-203ENSMUST00000106791 Igkv8-30A0A140T8M3 121 aa11.98□□□□□ -0.49
Trim3-203ENSMUST00000106791 Anapc11Q9CPX9 84 aa11.98□□□□□ -0.49
Trim3-203ENSMUST00000106791 Cox6a2P43023 97 aa11.97□□□□□ -0.49
Trim3-203ENSMUST00000106791 Bud31Q6PGH1 103 aa11.96□□□□□ -0.5
Trim3-203ENSMUST00000106791 Cypt14J3QPF7 87 aa11.92□□□□□ -0.5
Trim3-203ENSMUST00000106791 Krtap19-5O08632 62 aa11.91□□□□□ -0.5
Trim3-203ENSMUST00000106791 Pxt1Q8K459 51 aa11.91□□□□□ -0.5
Trim3-203ENSMUST00000106791 Xcl1P47993 114 aa11.91□□□□□ -0.5
Trim3-203ENSMUST00000106791 A730071L15RikQ8C4X0 137 aa11.91□□□□□ -0.5
Trim3-203ENSMUST00000106791 Rbm3O89086 153 aaKnown RBP11.89□□□□□ -0.51
Trim3-203ENSMUST00000106791 Q8BT88 171 aa11.89□□□□□ -0.51
Trim3-203ENSMUST00000106791 Igkv8-28A0A0G2JE47 121 aa11.88□□□□□ -0.51
Trim3-203ENSMUST00000106791 Inafm2A0A1L1STD6 152 aa11.88□□□□□ -0.51
Trim3-203ENSMUST00000106791 Chchd10Q7TNL9 138 aa11.87□□□□□ -0.51
Trim3-203ENSMUST00000106791 Gm10308Q9CVR5 141 aa11.87□□□□□ -0.51
Trim3-203ENSMUST00000106791 1700018G05RikA0A1B0GSI2 66 aa11.86□□□□□ -0.51
Trim3-203ENSMUST00000106791 Gm12353A2AGJ4 60 aa11.86□□□□□ -0.51
Trim3-203ENSMUST00000106791 Defa25Q5G864 92 aa11.86□□□□□ -0.51
Trim3-203ENSMUST00000106791 Pde6gP09174 87 aa11.84□□□□□ -0.51
Trim3-203ENSMUST00000106791 Sprr2jO70561 109 aa11.84□□□□□ -0.51
Trim3-203ENSMUST00000106791 Herc2Q4U2R1 4836 aa11.82□□□□□ -0.52
Trim3-203ENSMUST00000106791 Fat3Q8BNA6 4555 aa11.81□□□□□ -0.52
Trim3-203ENSMUST00000106791 Trav14d-3-dv8A0A075B619 120 aa11.79□□□□□ -0.52
Trim3-203ENSMUST00000106791 Gm28230A0A0A0MQ91 144 aa11.78□□□□□ -0.52
Trim3-203ENSMUST00000106791 Gtf2h5Q8K2X8 71 aa11.78□□□□□ -0.52
Trim3-203ENSMUST00000106791 Birc6O88738 4882 aa11.78□□□□□ -0.52
Trim3-203ENSMUST00000106791 Igkv3-10A0A0G2JGN0 119 aa11.77□□□□□ -0.53
Trim3-203ENSMUST00000106791 Lrp1Q91ZX7 4545 aaKnown RBP11.77□□□□□ -0.53
Trim3-203ENSMUST00000106791 Abca13Q5SSE9 5034 aa11.77□□□□□ -0.53
Trim3-203ENSMUST00000106791 Ormdl1Q921I0 153 aa11.76□□□□□ -0.53
Trim3-203ENSMUST00000106791 Defb12Q8K4N3 78 aa11.74□□□□□ -0.53
Trim3-203ENSMUST00000106791 Cby1Q9D1C2 127 aa11.72□□□□□ -0.53
Trim3-203ENSMUST00000106791 Igkv3-4A0A140T8Q4 119 aa11.69□□□□□ -0.54
Trim3-203ENSMUST00000106791 Kiaa1109A2AAE1 5005 aa11.69□□□□□ -0.54
Trim3-203ENSMUST00000106791 Dnhd1D3Z2X2 4750 aa11.66□□□□□ -0.54
Trim3-203ENSMUST00000106791 Gm44790A0A0N4SV91 103 aa11.66□□□□□ -0.54
Trim3-203ENSMUST00000106791 4930535I16RikQ9CUI2 172 aa11.65□□□□□ -0.54
Trim3-203ENSMUST00000106791 Lyrm7Q9DA03 104 aa11.64□□□□□ -0.55
Trim3-203ENSMUST00000106791 Spaca4Q80ZQ0 127 aa11.64□□□□□ -0.55
Trim3-203ENSMUST00000106791 Gm45213A0A0U1RNZ6 101 aa11.63□□□□□ -0.55
Trim3-203ENSMUST00000106791 Igkv8-21A0A140T8P7 120 aa11.63□□□□□ -0.55
Trim3-203ENSMUST00000106791 Tmem213Q08EA8 116 aa11.63□□□□□ -0.55
Trim3-203ENSMUST00000106791 Gm16253D3Z167 63 aa11.63□□□□□ -0.55
Trim3-203ENSMUST00000106791 Mrpl34Q99N91 92 aa11.63□□□□□ -0.55
Trim3-203ENSMUST00000106791 Fam240bJ3QMB3 78 aa11.62□□□□□ -0.55
Trim3-203ENSMUST00000106791 Gm37013Q8K491 104 aa11.62□□□□□ -0.55
Trim3-203ENSMUST00000106791 Cdip1Q9DB75 208 aa11.62□□□□□ -0.55
Trim3-203ENSMUST00000106791 Gm21886J3QJU9 214 aa11.6□□□□□ -0.55
Trim3-203ENSMUST00000106791 C130032M10RikQ8C888 123 aa11.6□□□□□ -0.55
Trim3-203ENSMUST00000106791 UqcrqQ9CQ69 82 aa11.6□□□□□ -0.55
Trim3-203ENSMUST00000106791 Dph3Q8K0W9 82 aa11.59□□□□□ -0.55
Trim3-203ENSMUST00000106791 Ubl5Q9EPV8 73 aa11.58□□□□□ -0.56
Trim3-203ENSMUST00000106791 D6Ertd527eA0A0N4SWI3 464 aa11.58□□□□□ -0.56
Trim3-203ENSMUST00000106791 MplkipQ9D011 178 aa11.55□□□□□ -0.56
Trim3-203ENSMUST00000106791 Gm20604F8WIA3 75 aa11.54□□□□□ -0.56
Trim3-203ENSMUST00000106791 A530084C06RikQ3UTW2 186 aa11.52□□□□□ -0.56
Trim3-203ENSMUST00000106791 Gm17689B3GLJ4 109 aa11.52□□□□□ -0.57
Trim3-203ENSMUST00000106791 Trav3-1Q5R1I8 114 aa11.51□□□□□ -0.57
Trim3-203ENSMUST00000106791 HydinQ80W93 5154 aa11.46□□□□□ -0.57
Trim3-203ENSMUST00000106791 SvipQ3UZP4 77 aa11.46□□□□□ -0.58
Trim3-203ENSMUST00000106791 Gm2310J3QNJ2 377 aa11.45□□□□□ -0.58
Trim3-203ENSMUST00000106791 Rps29P62274 56 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 6.6 ms