RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 SycnQ8VCK7 134 aa14.59□□□□□ -0.07
Upf3a-201ENSMUST00000043767 Igkv1-110A0A0B4J1I0 119 aa14.58□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Defa23Q5G866 93 aa14.58□□□□□ -0.08
Upf3a-201ENSMUST00000043767 1700012A03RikQ9DAF1 130 aa14.57□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Wfdc6bF6ULY1 148 aa14.56□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Fam229bQ8CF36 80 aa14.56□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Dnah2P0C6F1 4456 aa14.55□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Smim29Q8R043 75 aa14.55□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Cdk2ap2Q9CPY4 127 aa14.54□□□□□ -0.08
Upf3a-201ENSMUST00000043767 A830005F24RikQ8BRT5 167 aa14.53□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Gm7276Q3TYW4 209 aa14.53□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Fam19a5Q91WE9 132 aa14.53□□□□□ -0.08
Upf3a-201ENSMUST00000043767 Defa27F2Z403 93 aa14.52□□□□□ -0.09
Upf3a-201ENSMUST00000043767 B230307C23RikQ8BLB2 64 aa14.52□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Gm17689B3GLJ4 109 aa14.5□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Obox2E9PXV9 151 aa14.5□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Cd164Q9R0L9 197 aa14.48□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Igkv8-28A0A0G2JE47 121 aa14.47□□□□□ -0.09
Upf3a-201ENSMUST00000043767 P84750 121 aa14.47□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Prol1E9PYQ4 312 aa14.46□□□□□ -0.09
Upf3a-201ENSMUST00000043767 H2al1aQ5M8Q2 105 aa14.46□□□□□ -0.09
Upf3a-201ENSMUST00000043767 Ryr3A2AGL3 4863 aa14.45□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Fam19a3Q7TPG6 132 aa14.45□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Zcchc13Q9D548 170 aa14.45□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Vpreb2P13373 142 aa14.43□□□□□ -0.1
Upf3a-201ENSMUST00000043767 BikO70337 150 aa14.42□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Stard9Q80TF6 4561 aa14.41□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Gm10065F6TJM2 114 aa14.4□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Pkd1O08852 4293 aa14.4□□□□□ -0.1
Upf3a-201ENSMUST00000043767 Gm2696A0A1W2P709 240 aa14.39□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Defb37Q7TMD2 62 aa14.39□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Dmac1Q9CQ00 111 aa14.39□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Sprr2jO70561 109 aa14.38□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Krtap10-10A0A1W2P7T6 217 aa14.37□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Krtap29-1A2A5X4 342 aa14.36□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Serp1Q9Z1W5 66 aa14.36□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Sfta2E9PXB6 77 aa14.34□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Smlr1J3QMJ4 66 aa14.34□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Phf5aP83870 110 aaKnown RBP14.34□□□□□ -0.11
Upf3a-201ENSMUST00000043767 Defb9Q8R2I6 67 aa14.33□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Gm28374F6SG70 93 aa14.32□□□□□ -0.12
Upf3a-201ENSMUST00000043767 1600014C23RikQ9DAX4 101 aa14.31□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Wfdc3Q14AE4 130 aa14.3□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Brk1Q91VR8 75 aa14.3□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Igkv1-122A0A140T8M9 119 aa14.29□□□□□ -0.12
Upf3a-201ENSMUST00000043767 P06320 134 aa14.29□□□□□ -0.12
Upf3a-201ENSMUST00000043767 A330070K13RikQ8CA53 115 aa14.29□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Krtap13O88375 197 aa14.28□□□□□ -0.12
Upf3a-201ENSMUST00000043767 SnurfQ9WU12 71 aa14.28□□□□□ -0.12
Upf3a-201ENSMUST00000043767 UqcrqQ9CQ69 82 aa14.27□□□□□ -0.12
Upf3a-201ENSMUST00000043767 Gm11011D3Z3L9 86 aa14.26□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Pet100P0DJE0 76 aa14.26□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Cox6a2P43023 97 aa14.26□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Dync1h1Q9JHU4 4644 aaKnown RBP14.24□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Ube2bP63147 152 aa14.23□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Fam104aA2A6P4 185 aa14.22□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Fat1A0A1L1SQU7 4645 aa14.22□□□□□ -0.13
Upf3a-201ENSMUST00000043767 A930002H24RikQ8C8Y3 163 aa14.21□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Ryr2E9Q401 4966 aaKnown RBP14.21□□□□□ -0.13
Upf3a-201ENSMUST00000043767 Q8BT88 171 aa14.2□□□□□ -0.14
Upf3a-201ENSMUST00000043767 A0A286YE02 88 aa14.19□□□□□ -0.14
Upf3a-201ENSMUST00000043767 Gm10401E9Q3K6 71 aa14.19□□□□□ -0.14
Upf3a-201ENSMUST00000043767 Vpreb1P13372 142 aa14.19□□□□□ -0.14
Upf3a-201ENSMUST00000043767 ApobE9Q414 4505 aa14.17□□□□□ -0.14
Upf3a-201ENSMUST00000043767 Gpr15lA0A0B4J1N3 78 aa14.17□□□□□ -0.14
Upf3a-201ENSMUST00000043767 6030445D17RikE9Q8F9 148 aa14.17□□□□□ -0.14
Upf3a-201ENSMUST00000043767 Gm37013Q8K491 104 aa14.15□□□□□ -0.14
Upf3a-201ENSMUST00000043767 Prr15lQ8JZM2 100 aa14.14□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Pkhd1E9PZ36 4059 aa14.14□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Gm37389A0A0A6YW05 95 aa14.14□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Gm10570F6VB42 170 aa14.13□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Wfdc10Q3V2J9 124 aa14.13□□□□□ -0.15
Upf3a-201ENSMUST00000043767 C130032M10RikQ8C888 123 aa14.13□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Adm2Q7TNK8 150 aa14.12□□□□□ -0.15
Upf3a-201ENSMUST00000043767 HrnrQ8VHD8 2496 aa14.11□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Gm17521F6QAC8 156 aa14.11□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Dph3Q8K0W9 82 aa14.11□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Gm12353A2AGJ4 60 aa14.11□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Mrpl34Q99N91 92 aa14.11□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Igkv3-4A0A140T8Q4 119 aa14.1□□□□□ -0.15
Upf3a-201ENSMUST00000043767 Gm10337F7DEP7 55 aa14.1□□□□□ -0.15
Upf3a-201ENSMUST00000043767 NbdyA0A0N4SUI7 68 aa14.07□□□□□ -0.16
Upf3a-201ENSMUST00000043767 Vpreb3D3Z6J4 130 aa14.06□□□□□ -0.16
Upf3a-201ENSMUST00000043767 Gm10642Q3TWM1 71 aa14.05□□□□□ -0.16
Upf3a-201ENSMUST00000043767 Igkv8-19A0A0G2JFN8 121 aa14.03□□□□□ -0.16
Upf3a-201ENSMUST00000043767 A530084C06RikQ3UTW2 186 aa14.03□□□□□ -0.16
Upf3a-201ENSMUST00000043767 Krtap14O08640 167 aa14.02□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Gm44790A0A0N4SV91 103 aa14.01□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Defa28D3Z1V9 94 aa14.01□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Ube2aQ9Z255 152 aa14□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Coa6Q8BGD8 79 aa13.99□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Mrpl55Q9CZ83 127 aa13.99□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Spink8Q09TK9 105 aa13.99□□□□□ -0.17
Upf3a-201ENSMUST00000043767 AI606181Q8C7B9 129 aa13.99□□□□□ -0.17
Upf3a-201ENSMUST00000043767 H2al1bA0A087WP11 105 aa13.98□□□□□ -0.17
Upf3a-201ENSMUST00000043767 H2al1kJ3QP08 105 aa13.98□□□□□ -0.17
Upf3a-201ENSMUST00000043767 H2al1eQ810S6 105 aa13.98□□□□□ -0.17
Upf3a-201ENSMUST00000043767 H2al1mQ9DAD9 105 aa13.98□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Gm10139O88245 57 aa13.97□□□□□ -0.17
Upf3a-201ENSMUST00000043767 Tnp2P11378 117 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 81.5 ms