RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Defa28D3Z1V9 94 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 Xcl1P47993 114 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 TeppQ6IMH0 216 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 Ighv10-1A0A0B4J1J6 119 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 Defb9Q8R2I6 67 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 7530416G11RikJ3QJX6 159 aa5.51□□□□□ -1.53
Trim39-201ENSMUST00000042717 A0A286YE02 88 aa5.5□□□□□ -1.53
Trim39-201ENSMUST00000042717 Gm10160F6Y577 67 aa5.5□□□□□ -1.53
Trim39-201ENSMUST00000042717 Serp2Q6TAW2 65 aa5.5□□□□□ -1.53
Trim39-201ENSMUST00000042717 Zcchc13Q9D548 170 aa5.5□□□□□ -1.53
Trim39-201ENSMUST00000042717 Acyp1P56376 99 aa5.5□□□□□ -1.53
Trim39-201ENSMUST00000042717 Ighv2-2A0A075B5P8 116 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 Ighv2-5A0A0A6YY69 116 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 P01821 116 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 Elof1P60003 83 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 4930518I15RikQ3V2W7 57 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 Gm20726G3UX18 150 aa5.49□□□□□ -1.53
Trim39-201ENSMUST00000042717 Tmem243B2RVB9 118 aa5.48□□□□□ -1.53
Trim39-201ENSMUST00000042717 Krtap13O88375 197 aa5.48□□□□□ -1.53
Trim39-201ENSMUST00000042717 Lamtor3O88653 124 aa5.48□□□□□ -1.53
Trim39-201ENSMUST00000042717 D130052B06RikQ3UW13 202 aa5.48□□□□□ -1.53
Trim39-201ENSMUST00000042717 Adm2Q7TNK8 150 aa5.47□□□□□ -1.53
Trim39-201ENSMUST00000042717 Vps13dB1ART2 4390 aa5.47□□□□□ -1.53
Trim39-201ENSMUST00000042717 Gm10065F6TJM2 114 aa5.47□□□□□ -1.53
Trim39-201ENSMUST00000042717 Wfdc13Q5DQQ6 81 aa5.47□□□□□ -1.53
Trim39-201ENSMUST00000042717 Gm21887J3QQ04 176 aa5.46□□□□□ -1.54
Trim39-201ENSMUST00000042717 Ryr3A2AGL3 4863 aa5.46□□□□□ -1.54
Trim39-201ENSMUST00000042717 Wfdc10Q3V2J9 124 aa5.46□□□□□ -1.54
Trim39-201ENSMUST00000042717 Stard9Q80TF6 4561 aa5.46□□□□□ -1.54
Trim39-201ENSMUST00000042717 GhrhP16043 103 aa5.45□□□□□ -1.54
Trim39-201ENSMUST00000042717 Krtap29-1A2A5X4 342 aa5.45□□□□□ -1.54
Trim39-201ENSMUST00000042717 Vpreb1P13372 142 aa5.45□□□□□ -1.54
Trim39-201ENSMUST00000042717 Gm10642Q3TWM1 71 aa5.44□□□□□ -1.54
Trim39-201ENSMUST00000042717 Ube2aQ9Z255 152 aa5.44□□□□□ -1.54
Trim39-201ENSMUST00000042717 Gm7276Q3TYW4 209 aa5.44□□□□□ -1.54
Trim39-201ENSMUST00000042717 9530003J23RikQ8BM26 151 aa5.44□□□□□ -1.54
Trim39-201ENSMUST00000042717 Fam104aA2A6P4 185 aa5.43□□□□□ -1.54
Trim39-201ENSMUST00000042717 Igkv8-26A0A075B5N5 123 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 6030445D17RikE9Q8F9 148 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 Gm10570F6VB42 170 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 Tmem254aP0DN89 123 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 Tmem254bP0DN90 123 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 Tmem254cP0DN91 123 aa5.42□□□□□ -1.54
Trim39-201ENSMUST00000042717 A330070K13RikQ8CA53 115 aa5.41□□□□□ -1.54
Trim39-201ENSMUST00000042717 Gm17521F6QAC8 156 aa5.4□□□□□ -1.54
Trim39-201ENSMUST00000042717 Defa21Q8C1P2 93 aa5.4□□□□□ -1.54
Trim39-201ENSMUST00000042717 Wfdc3Q14AE4 130 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 A830005F24RikQ8BRT5 167 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 4930535I16RikQ9CUI2 172 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Dnah2P0C6F1 4456 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Gpr15lA0A0B4J1N3 78 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Igkv8-27A0A0G2JF28 120 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Igkv8-30A0A140T8M3 121 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Vpreb3D3Z6J4 130 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Serp1Q9Z1W5 66 aa5.39□□□□□ -1.55
Trim39-201ENSMUST00000042717 Igkv1-110A0A0B4J1I0 119 aa5.38□□□□□ -1.55
Trim39-201ENSMUST00000042717 A930002H24RikQ8C8Y3 163 aa5.38□□□□□ -1.55
Trim39-201ENSMUST00000042717 Ighv10-3A0A075B5T6 119 aa5.38□□□□□ -1.55
Trim39-201ENSMUST00000042717 Sfta2E9PXB6 77 aa5.38□□□□□ -1.55
Trim39-201ENSMUST00000042717 NbdyA0A0N4SUI7 68 aa5.37□□□□□ -1.55
Trim39-201ENSMUST00000042717 Igkv3-5A0A140T8M6 119 aa5.37□□□□□ -1.55
Trim39-201ENSMUST00000042717 Inafm2A0A1L1STD6 152 aa5.37□□□□□ -1.55
Trim39-201ENSMUST00000042717 Gm10401E9Q3K6 71 aa5.37□□□□□ -1.55
Trim39-201ENSMUST00000042717 P06320 134 aa5.37□□□□□ -1.55
Trim39-201ENSMUST00000042717 Cystm1Q8K353 104 aa5.36□□□□□ -1.55
Trim39-201ENSMUST00000042717 Krtap14O08640 167 aa5.36□□□□□ -1.55
Trim39-201ENSMUST00000042717 Ndufc1Q9CQY9 76 aa5.36□□□□□ -1.55
Trim39-201ENSMUST00000042717 Gm10308Q9CVR5 141 aa5.36□□□□□ -1.55
Trim39-201ENSMUST00000042717 Gm27235Q3UW50 83 aa5.35□□□□□ -1.55
Trim39-201ENSMUST00000042717 Igkv3-7A0A0G2JE31 119 aa5.35□□□□□ -1.55
Trim39-201ENSMUST00000042717 Anapc11Q9CPX9 84 aa5.35□□□□□ -1.55
Trim39-201ENSMUST00000042717 Rbm3O89086 153 aaKnown RBP5.34□□□□□ -1.55
Trim39-201ENSMUST00000042717 Vpreb2P13373 142 aa5.34□□□□□ -1.55
Trim39-201ENSMUST00000042717 AI606181Q8C7B9 129 aa5.34□□□□□ -1.55
Trim39-201ENSMUST00000042717 Brk1Q91VR8 75 aa5.34□□□□□ -1.55
Trim39-201ENSMUST00000042717 MplkipQ9D011 178 aa5.34□□□□□ -1.55
Trim39-201ENSMUST00000042717 Gm10139O88245 57 aa5.34□□□□□ -1.56
Trim39-201ENSMUST00000042717 Pet100P0DJE0 76 aa5.34□□□□□ -1.56
Trim39-201ENSMUST00000042717 1700018G05RikA0A1B0GSI2 66 aa5.33□□□□□ -1.56
Trim39-201ENSMUST00000042717 Cox6a2P43023 97 aa5.33□□□□□ -1.56
Trim39-201ENSMUST00000042717 Dph3Q8K0W9 82 aa5.33□□□□□ -1.56
Trim39-201ENSMUST00000042717 Igkv8-28A0A0G2JE47 121 aa5.33□□□□□ -1.56
Trim39-201ENSMUST00000042717 Q8K1L6 76 aa5.32□□□□□ -1.56
Trim39-201ENSMUST00000042717 Naa38Q9D2U5 125 aa5.32□□□□□ -1.56
Trim39-201ENSMUST00000042717 Fat1A0A1L1SQU7 4645 aa5.32□□□□□ -1.56
Trim39-201ENSMUST00000042717 Pkd1O08852 4293 aa5.32□□□□□ -1.56
Trim39-201ENSMUST00000042717 Dync1h1Q9JHU4 4644 aaKnown RBP5.32□□□□□ -1.56
Trim39-201ENSMUST00000042717 ApobE9Q414 4505 aa5.31□□□□□ -1.56
Trim39-201ENSMUST00000042717 A730071L15RikQ8C4X0 137 aa5.31□□□□□ -1.56
Trim39-201ENSMUST00000042717 Ormdl1Q921I0 153 aa5.31□□□□□ -1.56
Trim39-201ENSMUST00000042717 Q8BT88 171 aa5.3□□□□□ -1.56
Trim39-201ENSMUST00000042717 RetnlbQ99P86 105 aa5.3□□□□□ -1.56
Trim39-201ENSMUST00000042717 Ryr2E9Q401 4966 aaKnown RBP5.3□□□□□ -1.56
Trim39-201ENSMUST00000042717 Tnp2P11378 117 aa5.29□□□□□ -1.56
Trim39-201ENSMUST00000042717 B230307C23RikQ8BLB2 64 aa5.29□□□□□ -1.56
Trim39-201ENSMUST00000042717 Ubl5Q9EPV8 73 aa5.29□□□□□ -1.56
Trim39-201ENSMUST00000042717 Igkv8-21A0A140T8P7 120 aa5.28□□□□□ -1.56
Trim39-201ENSMUST00000042717 UqcrqQ9CQ69 82 aa5.28□□□□□ -1.56
Trim39-201ENSMUST00000042717 Odf3bQ5M8M2 238 aa5.27□□□□□ -1.57
Trim39-201ENSMUST00000042717 Fam19a3Q7TPG6 132 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 114.4 ms