RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Usp9xP70398 2559 aaKnown RBP9.54□□□□□ -0.88
Pcdha8-201ENSMUST00000194038 Piezo1E2JF22 2547 aa9.54□□□□□ -0.88
Pcdha8-201ENSMUST00000194038 Gm7276Q3TYW4 209 aa9.53□□□□□ -0.88
Pcdha8-201ENSMUST00000194038 Gpr15lA0A0B4J1N3 78 aa9.52□□□□□ -0.88
Pcdha8-201ENSMUST00000194038 Q8BGJ3 129 aa9.52□□□□□ -0.88
Pcdha8-201ENSMUST00000194038 Krtap11-1E9Q2E9 183 aa9.52□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Notch2O35516 2470 aa9.52□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 PtprqP0C5E4 2300 aa9.51□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 A330070K13RikQ8CA53 115 aa9.5□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Fam168bQ80XQ8 194 aa9.5□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Defb1P56386 69 aa9.49□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Spaca4Q80ZQ0 127 aa9.49□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Gm11213A0A1B0GR83 88 aa9.48□□□□□ -0.89
Pcdha8-201ENSMUST00000194038 Sptbn4E9PX29 2561 aa9.45□□□□□ -0.9
Pcdha8-201ENSMUST00000194038 PolqQ8CGS6 2544 aa9.44□□□□□ -0.9
Pcdha8-201ENSMUST00000194038 C530025M09RikF6RGA8 229 aa9.44□□□□□ -0.9
Pcdha8-201ENSMUST00000194038 CnbpP53996 178 aaKnown RBP9.42□□□□□ -0.9
Pcdha8-201ENSMUST00000194038 Phxr5P08399 672 aa9.4□□□□□ -0.9
Pcdha8-201ENSMUST00000194038 Fam229bQ8CF36 80 aa9.39□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 Lypd5Q9D7Z7 256 aa9.39□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 Chtf8P0CG14 533 aa9.38□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 SrcapA0A087WQ44 3271 aa9.38□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 Zfp462B1AWL2 2495 aaKnown RBP9.37□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 SetxA2AKX3 2646 aa9.35□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 Ptpn13Q64512 2453 aa9.35□□□□□ -0.91
Pcdha8-201ENSMUST00000194038 Cep192E9Q4Y4 2514 aaKnown RBP9.33□□□□□ -0.92
Pcdha8-201ENSMUST00000194038 Cypt15B1AXS0 87 aa9.33□□□□□ -0.92
Pcdha8-201ENSMUST00000194038 Chd8Q09XV5 2582 aaKnown RBP9.33□□□□□ -0.92
Pcdha8-201ENSMUST00000194038 Defb11Q8R2I7 77 aa9.31□□□□□ -0.92
Pcdha8-201ENSMUST00000194038 AW011738F6S7Q2 159 aa9.3□□□□□ -0.92
Pcdha8-201ENSMUST00000194038 Spata3Q9D9T6 193 aa9.27□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 Fam104aA2A6P4 185 aa9.26□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 Setd2E9Q5F9 2537 aa9.26□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 Rnase13Q5GAM7 153 aa9.23□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 Defb9Q8R2I6 67 aa9.22□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 Gm21798J3QNU5 87 aa9.21□□□□□ -0.93
Pcdha8-201ENSMUST00000194038 MtorQ9JLN9 2549 aa9.21□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 RetnlbQ99P86 105 aa9.21□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 TrrapQ80YV3 2565 aaKnown RBP9.2□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 Gm3250E9Q1M3 230 aa9.2□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 Zcchc13Q9D548 170 aa9.17□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 2310034C09RikQ9D746 214 aa9.16□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 Epg5Q80TA9 2572 aa9.15□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 Bahcc1Q3UHR0 2643 aa9.15□□□□□ -0.94
Pcdha8-201ENSMUST00000194038 Gm26620Q9CY65 116 aa9.13□□□□□ -0.95
Pcdha8-201ENSMUST00000194038 Gm20538F6Z9R1 75 aa9.12□□□□□ -0.95
Pcdha8-201ENSMUST00000194038 CriptO70333 101 aa9.12□□□□□ -0.95
Pcdha8-201ENSMUST00000194038 Anapc11Q9CPX9 84 aa9.1□□□□□ -0.95
Pcdha8-201ENSMUST00000194038 Gm10320E9PW43 113 aa9.09□□□□□ -0.95
Pcdha8-201ENSMUST00000194038 Cypt14J3QPF7 87 aa9.08□□□□□ -0.96
Pcdha8-201ENSMUST00000194038 Cystm1Q8K353 104 aa9.08□□□□□ -0.96
Pcdha8-201ENSMUST00000194038 Smim29Q8R043 75 aa9.06□□□□□ -0.96
Pcdha8-201ENSMUST00000194038 Nbeal1E9PYP2 2688 aa9.03□□□□□ -0.96
Pcdha8-201ENSMUST00000194038 Gm9955Q8CEJ8 102 aa9.02□□□□□ -0.96
Pcdha8-201ENSMUST00000194038 6030445D17RikE9Q8F9 148 aa9.02□□□□□ -0.97
Pcdha8-201ENSMUST00000194038 Gm3880A0A1B0GSB3 72 aa9.01□□□□□ -0.97
Pcdha8-201ENSMUST00000194038 Plac8Q9JI48 112 aa8.99□□□□□ -0.97
Pcdha8-201ENSMUST00000194038 Abca12E9Q876 2595 aa8.95□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Dmbt1Q60997 2085 aa8.95□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 NbdyA0A0N4SUI7 68 aa8.94□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Gm3646F6S692 53 aa8.94□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Usp9yF8VPU6 2556 aa8.93□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Gm10065F6TJM2 114 aa8.93□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Gm10139O88245 57 aa8.9□□□□□ -0.98
Pcdha8-201ENSMUST00000194038 Ankrd17Q99NH0 2603 aaKnown RBP8.89□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 Unc79Q0KK59 2596 aa8.89□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 Gm11565A2A4M7 156 aa8.89□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 A730071L15RikQ8C4X0 137 aa8.89□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 Gm4491E0CX42 125 aa8.86□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 CenpfE9Q3P4 2997 aaKnown RBP8.85□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 Myo18bE9PV66 2605 aa8.84□□□□□ -0.99
Pcdha8-201ENSMUST00000194038 Odf3bQ5M8M2 238 aa8.83□□□□□ -1
Pcdha8-201ENSMUST00000194038 Pla2g10Q9QXX3 151 aa8.82□□□□□ -1
Pcdha8-201ENSMUST00000194038 Gm3233E9Q2H5 230 aa8.81□□□□□ -1
Pcdha8-201ENSMUST00000194038 Gm37013Q8K491 104 aa8.81□□□□□ -1
Pcdha8-201ENSMUST00000194038 Sprr1aQ62266 144 aa8.8□□□□□ -1
Pcdha8-201ENSMUST00000194038 Golgb1E9PVZ8 3238 aa8.8□□□□□ -1
Pcdha8-201ENSMUST00000194038 Gm9821Q8K076 103 aa8.78□□□□□ -1
Pcdha8-201ENSMUST00000194038 1700042G07RikB1AUF7 90 aa8.77□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 4933415A04RikQ9D443 101 aa8.77□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 SmcpP15265 143 aa8.77□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 OxtP35454 125 aa8.76□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 Zfp292Q9Z2U2 2698 aa8.76□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 Lelp1Q9DAE3 120 aa8.75□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 Gm16253D3Z167 63 aa8.74□□□□□ -1.01
Pcdha8-201ENSMUST00000194038 CicQ924A2 2510 aa8.71□□□□□ -1.02
Pcdha8-201ENSMUST00000194038 Gcn1E9PVA8 2671 aaKnown RBP8.65□□□□□ -1.02
Pcdha8-201ENSMUST00000194038 Nsd1O88491 2588 aaKnown RBP8.64□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 Gm7138L7N2C3 230 aa8.64□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 Gm3238W4VSP7 230 aa8.64□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 Spink7Q6IE32 76 aa8.64□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 Romo1P60603 79 aa8.6□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 Rpl37Q9D823 97 aa8.59□□□□□ -1.03
Pcdha8-201ENSMUST00000194038 HrnrQ8VHD8 2496 aa8.58□□□□□ -1.04
Pcdha8-201ENSMUST00000194038 Ankrd11E9Q4F7 2643 aa8.55□□□□□ -1.04
Pcdha8-201ENSMUST00000194038 Fn1P11276 2477 aaKnown RBP8.55□□□□□ -1.04
Pcdha8-201ENSMUST00000194038 FasnP19096 2504 aaKnown RBP8.54□□□□□ -1.04
Pcdha8-201ENSMUST00000194038 FlnaQ8BTM8 2647 aaKnown RBP8.52□□□□□ -1.05
Pcdha8-201ENSMUST00000194038 Gm9195A0A140LHT4 2805 aa8.52□□□□□ -1.05
Pcdha8-201ENSMUST00000194038 Usp24B1AY13 2617 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms