RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Rpl39lQ9CQD0 51 aa9.76□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Gm17349F7BGH6 99 aa9.75□□□□□ -0.85
Rnf4-207ENSMUST00000182709 B230307C23RikQ8BLB2 64 aa9.75□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Gm5142Q8C5X9 133 aa9.75□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Igkv2-109A0A075B5K6 120 aa9.74□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Sprr1bQ62267 153 aa9.74□□□□□ -0.85
Rnf4-207ENSMUST00000182709 MplkipQ9D011 178 aa9.74□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Reg3dQ9QUS9 175 aa9.74□□□□□ -0.85
Rnf4-207ENSMUST00000182709 9430015G10RikA2ASP7 199 aa9.72□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Q9DAA7 145 aa9.72□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Gm10845Q3UNY9 185 aa9.72□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Dnah3Q8BW94 4083 aa9.72□□□□□ -0.85
Rnf4-207ENSMUST00000182709 Fam229bQ8CF36 80 aa9.71□□□□□ -0.85
Rnf4-207ENSMUST00000182709 A730009L09RikA0A1B0GS82 72 aa9.71□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Gm16485Q8C4B7 115 aa9.7□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Gm11213A0A1B0GR83 88 aa9.69□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Igkv8-21A0A140T8P7 120 aa9.69□□□□□ -0.86
Rnf4-207ENSMUST00000182709 H2al1aQ5M8Q2 105 aa9.69□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Klk12B2RVZ0 247 aa9.68□□□□□ -0.86
Rnf4-207ENSMUST00000182709 B9d2Q3UK10 175 aa9.68□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Psors1c2Q80ZC9 134 aa9.68□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Ormdl1Q921I0 153 aa9.68□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Ufsp1Q9CZP0 217 aa9.68□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Igkv1-88A0A140T8N1 120 aa9.67□□□□□ -0.86
Rnf4-207ENSMUST00000182709 SnurfQ9WU12 71 aa9.67□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Ubl5Q9EPV8 73 aa9.66□□□□□ -0.86
Rnf4-207ENSMUST00000182709 BikO70337 150 aa9.66□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Gm10308Q9CVR5 141 aa9.66□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Ighv2-9A0A075B5Q5 116 aa9.65□□□□□ -0.86
Rnf4-207ENSMUST00000182709 E130218I03RikA0A0U1RNU5 63 aa9.65□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Gm9903Q8C9Y8 129 aa9.65□□□□□ -0.86
Rnf4-207ENSMUST00000182709 Camk2n2Q78WH7 79 aa9.64□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Cox7b2Q9D2H1 82 aa9.64□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Ighv10-3A0A075B5T6 119 aa9.64□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Gm9507D3Z5T3 223 aa9.63□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv4-92A0A0B4J1I2 117 aa9.63□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv8-18A0A0B4J1J3 123 aa9.63□□□□□ -0.87
Rnf4-207ENSMUST00000182709 TgO08710 2766 aa9.63□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv8-27A0A0G2JF28 120 aa9.62□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv8-30A0A140T8M3 121 aa9.62□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Gm5153P01627 120 aa9.62□□□□□ -0.87
Rnf4-207ENSMUST00000182709 CnbpP53996 178 aaKnown RBP9.61□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Vpreb1P13372 142 aa9.61□□□□□ -0.87
Rnf4-207ENSMUST00000182709 HrnrQ8VHD8 2496 aa9.61□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv4-58A0A0G2JGI6 119 aa9.6□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Gm10320E9PW43 113 aa9.6□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Mrpl55Q9CZ83 127 aa9.6□□□□□ -0.87
Rnf4-207ENSMUST00000182709 TnxbO35452 4006 aa9.6□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Defa27F2Z403 93 aa9.6□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Fam19a3Q7TPG6 132 aa9.59□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Gm4707V9GXN5 68 aa9.59□□□□□ -0.87
Rnf4-207ENSMUST00000182709 BaalcQ8VHV1 145 aa9.59□□□□□ -0.87
Rnf4-207ENSMUST00000182709 Igkv8-26A0A075B5N5 123 aa9.58□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Gm17577J3QNF7 156 aa9.57□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Inafm2A0A1L1STD6 152 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Gm10337F7DEP7 55 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Lamtor3O88653 124 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 4930556J24RikQ9D4U7 146 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Gm17509Q9CZ61 145 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Igkv1-110A0A0B4J1I0 119 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Gm17689B3GLJ4 109 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Serp1Q9Z1W5 66 aa9.56□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Igkv3-2A0A075B5P0 119 aa9.55□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Sprr4Q8CGN8 76 aa9.55□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Smim29Q8R043 75 aa9.55□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Huwe1Q7TMY8 4377 aaKnown RBP9.54□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Gm9805F6YK59 57 aa9.53□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Dph3Q8K0W9 82 aa9.53□□□□□ -0.88
Rnf4-207ENSMUST00000182709 Fras1Q80T14 4010 aa9.52□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Pet100P0DJE0 76 aa9.52□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Tcl1b3P56842 122 aa9.52□□□□□ -0.89
Rnf4-207ENSMUST00000182709 P01819 144 aa9.52□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Fam168bQ80XQ8 194 aa9.52□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Cdk2ap2Q9CPY4 127 aa9.51□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Ndufc1Q9CQY9 76 aa9.5□□□□□ -0.89
Rnf4-207ENSMUST00000182709 A830005F24RikQ8BRT5 167 aa9.5□□□□□ -0.89
Rnf4-207ENSMUST00000182709 2310061N02RikQ9D6S9 174 aa9.5□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Dnah17Q69Z23 4481 aa9.5□□□□□ -0.89
Rnf4-207ENSMUST00000182709 AY074887Q8R5F9 132 aa9.5□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Trav14-1A0A0G2JF94 121 aa9.49□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Cox7bP56393 80 aa9.49□□□□□ -0.89
Rnf4-207ENSMUST00000182709 PrkdcP97313 4128 aa9.49□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Rbm3O89086 153 aaKnown RBP9.49□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Defb37Q7TMD2 62 aa9.49□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Ighv2-5A0A0A6YY69 116 aa9.48□□□□□ -0.89
Rnf4-207ENSMUST00000182709 A530084C06RikQ3UTW2 186 aa9.48□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Ighv10-1A0A0B4J1J6 119 aa9.47□□□□□ -0.89
Rnf4-207ENSMUST00000182709 9530003J23RikQ8BM26 151 aa9.47□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Cd164Q9R0L9 197 aa9.47□□□□□ -0.89
Rnf4-207ENSMUST00000182709 Igkv1-122A0A140T8M9 119 aa9.45□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Msrb1Q9JLC3 116 aa9.45□□□□□ -0.9
Rnf4-207ENSMUST00000182709 A730071L15RikQ8C4X0 137 aa9.44□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Tcl1b5P56845 121 aa9.43□□□□□ -0.9
Rnf4-207ENSMUST00000182709 2310034G01RikA0A286YDL3 209 aa9.42□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Plac8Q9JI48 112 aa9.42□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Defb11Q8R2I7 77 aa9.42□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Dnah1E9Q8T7 4250 aa9.41□□□□□ -0.9
Rnf4-207ENSMUST00000182709 Igkv3-12A0A140T8P0 119 aa9.41□□□□□ -0.9
Rnf4-207ENSMUST00000182709 H2al1bA0A087WP11 105 aa9.41□□□□□ -0.9
Rnf4-207ENSMUST00000182709 H2al1kJ3QP08 105 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 94 ms