RNA–Protein interactions for RNA: ENSMUST00000120987.1

Trappc11-202, Transcript of Trafficking protein particle complex subunit 11, mousemouse

TSL 1 (best) BASIC

Gene Trappc11, Length 2,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc11-202ENSMUST00000120987 U90926O08546 118 aa10.27□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Lgals4Q8K419 326 aa10.27□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Rpl28P41105 137 aaKnown RBP10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Defa20Q45VN2 95 aa10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Gm11627A6PWP4 55 aa10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Gm5153P01627 120 aa10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Cox7bP56393 80 aa10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Tmem213Q08EA8 116 aa10.26□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Cdip1Q9DB75 208 aa10.25□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Smlr1J3QMJ4 66 aa10.24□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Dnah2P0C6F1 4456 aa10.23□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Igkv3-2A0A075B5P0 119 aa10.23□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Pou2af1Q64693 256 aa10.23□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Mrpl52Q9D0Y8 121 aa10.23□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Rpl18aP62717 176 aaKnown RBP10.22□□□□□ -0.77
Trappc11-202ENSMUST00000120987 PscaP57096 123 aa10.22□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Fam168bQ80XQ8 194 aa10.21□□□□□ -0.77
Trappc11-202ENSMUST00000120987 Defb29Q8BGW9 78 aa10.21□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Dnal4Q9DCM4 105 aa10.21□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Dnah5Q8VHE6 4621 aa10.19□□□□□ -0.78
Trappc11-202ENSMUST00000120987 P01819 144 aa10.19□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Igkv1-88A0A140T8N1 120 aa10.18□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Gm16381A0A1Y7VKT9 73 aa10.18□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Smim26Q3V460 107 aa10.18□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Wfdc6bF6ULY1 148 aa10.18□□□□□ -0.78
Trappc11-202ENSMUST00000120987 SycnQ8VCK7 134 aa10.17□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Trav13n-2A0A0G2JF93 110 aa10.16□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Defa23Q5G866 93 aa10.16□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Gm5142Q8C5X9 133 aa10.16□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Smim29Q8R043 75 aa10.16□□□□□ -0.78
Trappc11-202ENSMUST00000120987 Igkv1-35A0A0G2JDE5 120 aa10.14□□□□□ -0.79
Trappc11-202ENSMUST00000120987 1700012A03RikQ9DAF1 130 aa10.14□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Gm9805F6YK59 57 aa10.14□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Gm10767Q3TQP0 103 aa10.14□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Pkd1O08852 4293 aa10.14□□□□□ -0.79
Trappc11-202ENSMUST00000120987 4930524J08RikQ9CUJ5 163 aa10.13□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Prol1E9PYQ4 312 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 1700020N15RikL7MTX3 112 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 PkigO70139 76 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 P84750 121 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Fam19a5Q91WE9 132 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Cdk2ap2Q9CPY4 127 aa10.12□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Defa27F2Z403 93 aa10.11□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Gm10770F7D043 238 aa10.11□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Trav3-4A0A075B654 114 aa10.11□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Obox2E9PXV9 151 aa10.11□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Zcchc13Q9D548 170 aa10.11□□□□□ -0.79
Trappc11-202ENSMUST00000120987 2310034G01RikA0A286YDL3 209 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Acyp1P56376 99 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 TeppQ6IMH0 216 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Fam19a1Q7TPG8 133 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Ryr3A2AGL3 4863 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Gm10320E9PW43 113 aa10.1□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Defa4P28311 92 aa10.09□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Ntn5Q3UQ22 452 aa10.09□□□□□ -0.79
Trappc11-202ENSMUST00000120987 Gm10065F6TJM2 114 aa10.08□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Cd164Q9R0L9 197 aa10.08□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Klk12B2RVZ0 247 aa10.08□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Rpl39lQ9CQD0 51 aa10.06□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Dmac1Q9CQ00 111 aa10.06□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Krtap29-1A2A5X4 342 aa10.05□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Atp5eP56382 52 aa10.05□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Q9DAA7 145 aa10.05□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Igkv4-58A0A0G2JGI6 119 aa10.05□□□□□ -0.8
Trappc11-202ENSMUST00000120987 5730596B20RikQ8BQ08 205 aa10.05□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Gm2696A0A1W2P709 240 aa10.03□□□□□ -0.8
Trappc11-202ENSMUST00000120987 BC048502Q80Y74 154 aa10.03□□□□□ -0.8
Trappc11-202ENSMUST00000120987 Stard9Q80TF6 4561 aa10.03□□□□□ -0.8
Trappc11-202ENSMUST00000120987 E130218I03RikA0A0U1RNU5 63 aa10.02□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Ighv2-2A0A075B5P8 116 aa10.02□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Ighv2-5A0A0A6YY69 116 aa10.02□□□□□ -0.81
Trappc11-202ENSMUST00000120987 P01821 116 aa10.02□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Krtap10-10A0A1W2P7T6 217 aa10.01□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Ighv10-1A0A0B4J1J6 119 aa10□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Phf5aP83870 110 aaKnown RBP10□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Defb9Q8R2I6 67 aa10□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Elof1P60003 83 aa10□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Gm7276Q3TYW4 209 aa10□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Wfdc3Q14AE4 130 aa9.99□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Znf414Q9DCK4 299 aa9.99□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Msrb1Q9JLC3 116 aa9.99□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Dync1h1Q9JHU4 4644 aaKnown RBP9.99□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Lyrm7Q9DA03 104 aa9.97□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Fat1A0A1L1SQU7 4645 aa9.97□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Ryr2E9Q401 4966 aaKnown RBP9.96□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Gm11011D3Z3L9 86 aa9.96□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Gm28374F6SG70 93 aa9.96□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Krtap13O88375 197 aa9.96□□□□□ -0.81
Trappc11-202ENSMUST00000120987 Igkv2-109A0A075B5K6 120 aa9.95□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Fam104aA2A6P4 185 aa9.95□□□□□ -0.82
Trappc11-202ENSMUST00000120987 1600014C23RikQ9DAX4 101 aa9.95□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Xcl1P47993 114 aa9.95□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Gm7102J3QQ10 178 aa9.94□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Defa7P50705 93 aa9.94□□□□□ -0.82
Trappc11-202ENSMUST00000120987 ApobE9Q414 4505 aa9.93□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Ifitm6A0A1B0GS75 124 aa9.93□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Trav14d-3-dv8A0A075B619 120 aa9.92□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Rps28P62858 69 aaKnown RBP9.92□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Apoc4Q61268 124 aa9.92□□□□□ -0.82
Trappc11-202ENSMUST00000120987 Defb37Q7TMD2 62 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms