RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Defb11Q8R2I7 77 aa10.42□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Gm12216A0A1W2P827 62 aa10.41□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Q8BT88 171 aa10.41□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Spata3Q9D9T6 193 aa10.41□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Sprr4Q8CGN8 76 aa10.4□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 AY074887Q8R5F9 132 aa10.4□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Epg5Q80TA9 2572 aa10.4□□□□□ -0.74
Pcdha9-201ENSMUST00000115659 Gm20661K7N787 53 aa10.39□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Eif4ebp3Q80VV3 101 aa10.39□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Coa5Q99M07 74 aa10.38□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Gpr15lA0A0B4J1N3 78 aa10.36□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Rpl37aP61514 92 aa10.35□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Krtap11-1E9Q2E9 183 aa10.35□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 1810062G17RikG3X8Y2 129 aa10.34□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Cep192E9Q4Y4 2514 aaKnown RBP10.34□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 Gm7276Q3TYW4 209 aa10.34□□□□□ -0.75
Pcdha9-201ENSMUST00000115659 AW011738F6S7Q2 159 aa10.33□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 AplnQ9R0R4 77 aa10.31□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 Lypd5Q9D7Z7 256 aa10.3□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 Phxr4P15974 95 aa10.3□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 Fam168bQ80XQ8 194 aa10.29□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 Spaca4Q80ZQ0 127 aa10.29□□□□□ -0.76
Pcdha9-201ENSMUST00000115659 Abca12E9Q876 2595 aa10.26□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Q8BGJ3 129 aa10.25□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Gm5617Q91VN2 117 aa10.24□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Gm10643Q3URG9 111 aa10.23□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Uqcr11Q9CPX8 56 aa10.23□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Unc79Q0KK59 2596 aa10.22□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 C530025M09RikF6RGA8 229 aa10.22□□□□□ -0.77
Pcdha9-201ENSMUST00000115659 Gm3250E9Q1M3 230 aa10.18□□□□□ -0.78
Pcdha9-201ENSMUST00000115659 A330070K13RikQ8CA53 115 aa10.18□□□□□ -0.78
Pcdha9-201ENSMUST00000115659 Myo18bE9PV66 2605 aa10.17□□□□□ -0.78
Pcdha9-201ENSMUST00000115659 Gm11213A0A1B0GR83 88 aa10.15□□□□□ -0.78
Pcdha9-201ENSMUST00000115659 Usp9yF8VPU6 2556 aa10.12□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Defb1P56386 69 aa10.12□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Cypt15B1AXS0 87 aa10.11□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Mp68P56379 58 aa10.11□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 CnbpP53996 178 aaKnown RBP10.1□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Ankrd17Q99NH0 2603 aaKnown RBP10.1□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Fam104aA2A6P4 185 aa10.09□□□□□ -0.79
Pcdha9-201ENSMUST00000115659 Nbeal1E9PYP2 2688 aa10.07□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 Defb9Q8R2I6 67 aa10.05□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 Gm11565A2A4M7 156 aa10.04□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 RetnlbQ99P86 105 aa10.03□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 Zcchc13Q9D548 170 aa10.03□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 Chtf8P0CG14 533 aa10.03□□□□□ -0.8
Pcdha9-201ENSMUST00000115659 Zfp292Q9Z2U2 2698 aa10□□□□□ -0.81
Pcdha9-201ENSMUST00000115659 CenpfE9Q3P4 2997 aaKnown RBP9.98□□□□□ -0.81
Pcdha9-201ENSMUST00000115659 Fam229bQ8CF36 80 aa9.96□□□□□ -0.81
Pcdha9-201ENSMUST00000115659 CicQ924A2 2510 aa9.95□□□□□ -0.82
Pcdha9-201ENSMUST00000115659 Gm26620Q9CY65 116 aa9.94□□□□□ -0.82
Pcdha9-201ENSMUST00000115659 Phxr5P08399 672 aa9.93□□□□□ -0.82
Pcdha9-201ENSMUST00000115659 Cypt14J3QPF7 87 aa9.89□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Ankrd11E9Q4F7 2643 aa9.87□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Rnase13Q5GAM7 153 aa9.86□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Gm21798J3QNU5 87 aa9.86□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Anapc11Q9CPX9 84 aa9.86□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Plac8Q9JI48 112 aa9.85□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 FasnP19096 2504 aaKnown RBP9.85□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 2310034C09RikQ9D746 214 aa9.84□□□□□ -0.83
Pcdha9-201ENSMUST00000115659 Gm10065F6TJM2 114 aa9.82□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 OxtP35454 125 aa9.82□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 NbdyA0A0N4SUI7 68 aa9.8□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 Smim29Q8R043 75 aa9.8□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 Gm10320E9PW43 113 aa9.79□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 Golgb1E9PVZ8 3238 aa9.79□□□□□ -0.84
Pcdha9-201ENSMUST00000115659 Gm3233E9Q2H5 230 aa9.76□□□□□ -0.85
Pcdha9-201ENSMUST00000115659 Gcn1E9PVA8 2671 aaKnown RBP9.76□□□□□ -0.85
Pcdha9-201ENSMUST00000115659 FlnbQ80X90 2602 aaKnown RBP9.74□□□□□ -0.85
Pcdha9-201ENSMUST00000115659 Lelp1Q9DAE3 120 aa9.73□□□□□ -0.85
Pcdha9-201ENSMUST00000115659 Gm20538F6Z9R1 75 aa9.73□□□□□ -0.85
Pcdha9-201ENSMUST00000115659 FlnaQ8BTM8 2647 aaKnown RBP9.7□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Fn1P11276 2477 aaKnown RBP9.69□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Usp24B1AY13 2617 aaKnown RBP9.69□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 CriptO70333 101 aa9.69□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 6030445D17RikE9Q8F9 148 aa9.68□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Nsd1O88491 2588 aaKnown RBP9.68□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Gm10139O88245 57 aa9.67□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Gm9955Q8CEJ8 102 aa9.67□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 AtrQ9JKK8 2635 aa9.66□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 PcntP48725 2898 aa9.65□□□□□ -0.86
Pcdha9-201ENSMUST00000115659 Cystm1Q8K353 104 aa9.63□□□□□ -0.87
Pcdha9-201ENSMUST00000115659 Sprr1aQ62266 144 aa9.63□□□□□ -0.87
Pcdha9-201ENSMUST00000115659 Odf3bQ5M8M2 238 aa9.61□□□□□ -0.87
Pcdha9-201ENSMUST00000115659 Gm9195A0A140LHT4 2805 aa9.61□□□□□ -0.87
Pcdha9-201ENSMUST00000115659 Dmbt1Q60997 2085 aa9.61□□□□□ -0.87
Pcdha9-201ENSMUST00000115659 Gm42715A0A087WP63 3095 aaKnown RBP9.56□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Notch1Q01705 2531 aa9.56□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 A730071L15RikQ8C4X0 137 aa9.56□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Gm4491E0CX42 125 aa9.56□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Gm9821Q8K076 103 aa9.56□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Gm7138L7N2C3 230 aa9.55□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Gm3238W4VSP7 230 aa9.55□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Gm3880A0A1B0GSB3 72 aa9.54□□□□□ -0.88
Pcdha9-201ENSMUST00000115659 Kmt2bO08550 2713 aa9.52□□□□□ -0.89
Pcdha9-201ENSMUST00000115659 Gm16253D3Z167 63 aa9.51□□□□□ -0.89
Pcdha9-201ENSMUST00000115659 Dnah12Q3V0Q1 3086 aa9.5□□□□□ -0.89
Pcdha9-201ENSMUST00000115659 HrnrQ8VHD8 2496 aa9.5□□□□□ -0.89
Pcdha9-201ENSMUST00000115659 Prrc2cQ3TLH4 2846 aaKnown RBP9.48□□□□□ -0.89
Pcdha9-201ENSMUST00000115659 Ep400Q8CHI8 3072 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 60.1 ms