RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Gm10999F6Q4M4 69 aa11.86□□□□□ -0.51
Col4a3bp-202ENSMUST00000109444 Pkd1l2Q7TN88 2461 aa11.86□□□□□ -0.51
Col4a3bp-202ENSMUST00000109444 Rpl37aP61514 92 aa11.85□□□□□ -0.51
Col4a3bp-202ENSMUST00000109444 Gm12216A0A1W2P827 62 aa11.83□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 SrcapA0A087WQ44 3271 aa11.82□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 C530025M09RikF6RGA8 229 aa11.82□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 AplnQ9R0R4 77 aa11.81□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 Uqcr11Q9CPX8 56 aa11.81□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 Chd8Q09XV5 2582 aaKnown RBP11.79□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 Gm5617Q91VN2 117 aa11.79□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 Spata3Q9D9T6 193 aa11.78□□□□□ -0.52
Col4a3bp-202ENSMUST00000109444 Fam168bQ80XQ8 194 aa11.77□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 Ptpn13Q64512 2453 aa11.76□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 CnbpP53996 178 aaKnown RBP11.76□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 A330070K13RikQ8CA53 115 aa11.75□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 Gpr15lA0A0B4J1N3 78 aa11.72□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 Cep192E9Q4Y4 2514 aaKnown RBP11.71□□□□□ -0.53
Col4a3bp-202ENSMUST00000109444 Gm11565A2A4M7 156 aa11.71□□□□□ -0.54
Col4a3bp-202ENSMUST00000109444 Defb11Q8R2I7 77 aa11.69□□□□□ -0.54
Col4a3bp-202ENSMUST00000109444 Gm11213A0A1B0GR83 88 aa11.66□□□□□ -0.54
Col4a3bp-202ENSMUST00000109444 Q8BGJ3 129 aa11.65□□□□□ -0.54
Col4a3bp-202ENSMUST00000109444 Spaca4Q80ZQ0 127 aa11.65□□□□□ -0.54
Col4a3bp-202ENSMUST00000109444 Fam104aA2A6P4 185 aa11.63□□□□□ -0.55
Col4a3bp-202ENSMUST00000109444 Zfp462B1AWL2 2495 aaKnown RBP11.62□□□□□ -0.55
Col4a3bp-202ENSMUST00000109444 Notch2O35516 2470 aa11.6□□□□□ -0.55
Col4a3bp-202ENSMUST00000109444 Fam229bQ8CF36 80 aa11.56□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 Chtf8P0CG14 533 aa11.55□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 TrrapQ80YV3 2565 aaKnown RBP11.55□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 Cypt15B1AXS0 87 aa11.54□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 Zcchc13Q9D548 170 aa11.54□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 PtprqP0C5E4 2300 aa11.53□□□□□ -0.56
Col4a3bp-202ENSMUST00000109444 Epg5Q80TA9 2572 aa11.5□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 Setd2E9Q5F9 2537 aa11.5□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 MtorQ9JLN9 2549 aa11.5□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 Defb1P56386 69 aa11.49□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 PolqQ8CGS6 2544 aa11.48□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 Mp68P56379 58 aa11.48□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 Defb9Q8R2I6 67 aa11.48□□□□□ -0.57
Col4a3bp-202ENSMUST00000109444 Gm3250E9Q1M3 230 aa11.44□□□□□ -0.58
Col4a3bp-202ENSMUST00000109444 CenpfE9Q3P4 2997 aaKnown RBP11.44□□□□□ -0.58
Col4a3bp-202ENSMUST00000109444 Bahcc1Q3UHR0 2643 aa11.41□□□□□ -0.58
Col4a3bp-202ENSMUST00000109444 Cypt14J3QPF7 87 aa11.37□□□□□ -0.59
Col4a3bp-202ENSMUST00000109444 Gm10320E9PW43 113 aa11.35□□□□□ -0.59
Col4a3bp-202ENSMUST00000109444 Ankrd17Q99NH0 2603 aaKnown RBP11.33□□□□□ -0.6
Col4a3bp-202ENSMUST00000109444 Gm26620Q9CY65 116 aa11.33□□□□□ -0.6
Col4a3bp-202ENSMUST00000109444 Gm21798J3QNU5 87 aa11.3□□□□□ -0.6
Col4a3bp-202ENSMUST00000109444 Phxr5P08399 672 aa11.3□□□□□ -0.6
Col4a3bp-202ENSMUST00000109444 Abca12E9Q876 2595 aa11.29□□□□□ -0.6
Col4a3bp-202ENSMUST00000109444 Smim29Q8R043 75 aa11.27□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 2310034C09RikQ9D746 214 aa11.27□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 Gm10065F6TJM2 114 aa11.26□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 Cystm1Q8K353 104 aa11.25□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 RetnlbQ99P86 105 aa11.23□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 NbdyA0A0N4SUI7 68 aa11.22□□□□□ -0.61
Col4a3bp-202ENSMUST00000109444 Golgb1E9PVZ8 3238 aa11.19□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Anapc11Q9CPX9 84 aa11.19□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Gm10139O88245 57 aa11.19□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Lelp1Q9DAE3 120 aa11.17□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Unc79Q0KK59 2596 aa11.17□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Rnase13Q5GAM7 153 aa11.16□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Zfp292Q9Z2U2 2698 aa11.16□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 Plac8Q9JI48 112 aa11.15□□□□□ -0.62
Col4a3bp-202ENSMUST00000109444 A730071L15RikQ8C4X0 137 aa11.14□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 Sprr1aQ62266 144 aa11.14□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 6030445D17RikE9Q8F9 148 aa11.12□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 Nbeal1E9PYP2 2688 aa11.1□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 Usp9yF8VPU6 2556 aa11.1□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 Gm9955Q8CEJ8 102 aa11.08□□□□□ -0.63
Col4a3bp-202ENSMUST00000109444 Dmbt1Q60997 2085 aa11.08□□□□□ -0.64
Col4a3bp-202ENSMUST00000109444 Odf3bQ5M8M2 238 aa11.07□□□□□ -0.64
Col4a3bp-202ENSMUST00000109444 OxtP35454 125 aa11.05□□□□□ -0.64
Col4a3bp-202ENSMUST00000109444 Myo18bE9PV66 2605 aa11.03□□□□□ -0.64
Col4a3bp-202ENSMUST00000109444 CriptO70333 101 aa11.03□□□□□ -0.64
Col4a3bp-202ENSMUST00000109444 Gm3233E9Q2H5 230 aa11.02□□□□□ -0.65
Col4a3bp-202ENSMUST00000109444 Gm37013Q8K491 104 aa11.01□□□□□ -0.65
Col4a3bp-202ENSMUST00000109444 Gm20538F6Z9R1 75 aa10.97□□□□□ -0.65
Col4a3bp-202ENSMUST00000109444 SmcpP15265 143 aa10.97□□□□□ -0.65
Col4a3bp-202ENSMUST00000109444 Gm16253D3Z167 63 aa10.96□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gm3646F6S692 53 aa10.94□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gm9195A0A140LHT4 2805 aa10.93□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gm42715A0A087WP63 3095 aaKnown RBP10.93□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gm4491E0CX42 125 aa10.93□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gcn1E9PVA8 2671 aaKnown RBP10.91□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 Gm3880A0A1B0GSB3 72 aa10.9□□□□□ -0.66
Col4a3bp-202ENSMUST00000109444 4933415A04RikQ9D443 101 aa10.84□□□□□ -0.67
Col4a3bp-202ENSMUST00000109444 Dnah12Q3V0Q1 3086 aa10.84□□□□□ -0.67
Col4a3bp-202ENSMUST00000109444 FlnaQ8BTM8 2647 aaKnown RBP10.82□□□□□ -0.68
Col4a3bp-202ENSMUST00000109444 PcntP48725 2898 aa10.82□□□□□ -0.68
Col4a3bp-202ENSMUST00000109444 Gm7138L7N2C3 230 aa10.81□□□□□ -0.68
Col4a3bp-202ENSMUST00000109444 Gm3238W4VSP7 230 aa10.81□□□□□ -0.68
Col4a3bp-202ENSMUST00000109444 Gm9821Q8K076 103 aa10.77□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 Lama2Q60675 3118 aaKnown RBP10.76□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 Ep400Q8CHI8 3072 aaKnown RBP10.76□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 Nsd1O88491 2588 aaKnown RBP10.76□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 FlnbQ80X90 2602 aaKnown RBP10.75□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 CicQ924A2 2510 aa10.74□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 1700042G07RikB1AUF7 90 aa10.74□□□□□ -0.69
Col4a3bp-202ENSMUST00000109444 Krtap29-1A2A5X4 342 aa10.7□□□□□ -0.7
Col4a3bp-202ENSMUST00000109444 Tnrc18Q80WC3 2878 aa10.69□□□□□ -0.7
Col4a3bp-202ENSMUST00000109444 UtrnE9Q6R7 3430 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms