RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Fam19a5Q91WE9 132 aa12.35□□□□□ -0.43
Trim47-202ENSMUST00000106441 2010109I03RikQ9CQ11 111 aa12.35□□□□□ -0.43
Trim47-202ENSMUST00000106441 Igkv2-109A0A075B5K6 120 aa12.34□□□□□ -0.43
Trim47-202ENSMUST00000106441 Ighv10-1A0A0B4J1J6 119 aa12.34□□□□□ -0.43
Trim47-202ENSMUST00000106441 Fam19a1Q7TPG8 133 aa12.34□□□□□ -0.43
Trim47-202ENSMUST00000106441 Ndufc1Q9CQY9 76 aa12.34□□□□□ -0.43
Trim47-202ENSMUST00000106441 Klk12B2RVZ0 247 aa12.33□□□□□ -0.44
Trim47-202ENSMUST00000106441 Defa23Q5G866 93 aa12.33□□□□□ -0.44
Trim47-202ENSMUST00000106441 Igkv8-16A0A0G2JDG9 121 aa12.33□□□□□ -0.44
Trim47-202ENSMUST00000106441 Igkv8-26A0A075B5N5 123 aa12.32□□□□□ -0.44
Trim47-202ENSMUST00000106441 Igkv8-24A0A140T8P5 121 aa12.32□□□□□ -0.44
Trim47-202ENSMUST00000106441 Sslp1Q3UN54 99 aa12.32□□□□□ -0.44
Trim47-202ENSMUST00000106441 Higd2aQ9CQJ1 106 aa12.32□□□□□ -0.44
Trim47-202ENSMUST00000106441 Reg3dQ9QUS9 175 aa12.31□□□□□ -0.44
Trim47-202ENSMUST00000106441 Gm9805F6YK59 57 aa12.3□□□□□ -0.44
Trim47-202ENSMUST00000106441 Ighv13-2A0A0A6YWN3 119 aa12.3□□□□□ -0.44
Trim47-202ENSMUST00000106441 Igkv8-27A0A0G2JF28 120 aa12.29□□□□□ -0.44
Trim47-202ENSMUST00000106441 Igkv8-30A0A140T8M3 121 aa12.29□□□□□ -0.44
Trim47-202ENSMUST00000106441 4930535I16RikQ9CUI2 172 aa12.29□□□□□ -0.44
Trim47-202ENSMUST00000106441 Gm10320E9PW43 113 aa12.28□□□□□ -0.44
Trim47-202ENSMUST00000106441 Krtap11-1E9Q2E9 183 aa12.27□□□□□ -0.45
Trim47-202ENSMUST00000106441 Ighv8-13A0A075B5Y0 101 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 Gm10770F7D043 238 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 B230307C23RikQ8BLB2 64 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 Pkd1l1Q8R526 2615 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 BaalcQ8VHV1 145 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 Wfdc12Q9JHY3 85 aa12.26□□□□□ -0.45
Trim47-202ENSMUST00000106441 Igkv4-58A0A0G2JGI6 119 aa12.25□□□□□ -0.45
Trim47-202ENSMUST00000106441 Pde6gP09174 87 aa12.25□□□□□ -0.45
Trim47-202ENSMUST00000106441 Muc6Q80T03 2850 aa12.23□□□□□ -0.45
Trim47-202ENSMUST00000106441 Serp1Q9Z1W5 66 aa12.23□□□□□ -0.45
Trim47-202ENSMUST00000106441 Igkv3-1A0A075B5P1 119 aa12.22□□□□□ -0.45
Trim47-202ENSMUST00000106441 Gm11213A0A1B0GR83 88 aa12.22□□□□□ -0.45
Trim47-202ENSMUST00000106441 Lamtor3O88653 124 aa12.22□□□□□ -0.45
Trim47-202ENSMUST00000106441 AY074887Q8R5F9 132 aa12.22□□□□□ -0.45
Trim47-202ENSMUST00000106441 Tenm2Q9WTS5 2764 aa12.21□□□□□ -0.45
Trim47-202ENSMUST00000106441 Gm17509Q9CZ61 145 aa12.21□□□□□ -0.45
Trim47-202ENSMUST00000106441 MplkipQ9D011 178 aa12.21□□□□□ -0.45
Trim47-202ENSMUST00000106441 Ighv2-2A0A075B5P8 116 aa12.2□□□□□ -0.46
Trim47-202ENSMUST00000106441 P01821 116 aa12.2□□□□□ -0.46
Trim47-202ENSMUST00000106441 Fam229bQ8CF36 80 aa12.2□□□□□ -0.46
Trim47-202ENSMUST00000106441 9530003J23RikQ8BM26 151 aa12.2□□□□□ -0.46
Trim47-202ENSMUST00000106441 Brk1Q91VR8 75 aa12.2□□□□□ -0.46
Trim47-202ENSMUST00000106441 Igkv1-110A0A0B4J1I0 119 aa12.19□□□□□ -0.46
Trim47-202ENSMUST00000106441 Igkv4-92A0A0B4J1I2 117 aa12.19□□□□□ -0.46
Trim47-202ENSMUST00000106441 Gm10337F7DEP7 55 aa12.18□□□□□ -0.46
Trim47-202ENSMUST00000106441 Vpreb1P13372 142 aa12.18□□□□□ -0.46
Trim47-202ENSMUST00000106441 Msrb1Q9JLC3 116 aa12.18□□□□□ -0.46
Trim47-202ENSMUST00000106441 Rbm3O89086 153 aaKnown RBP12.17□□□□□ -0.46
Trim47-202ENSMUST00000106441 BikO70337 150 aa12.16□□□□□ -0.46
Trim47-202ENSMUST00000106441 Dnah3Q8BW94 4083 aa12.16□□□□□ -0.46
Trim47-202ENSMUST00000106441 E130218I03RikA0A0U1RNU5 63 aa12.15□□□□□ -0.46
Trim47-202ENSMUST00000106441 BC048502Q80Y74 154 aa12.15□□□□□ -0.46
Trim47-202ENSMUST00000106441 Cox7b2Q9D2H1 82 aa12.15□□□□□ -0.46
Trim47-202ENSMUST00000106441 Gm16181B0V2H2 73 aa12.15□□□□□ -0.47
Trim47-202ENSMUST00000106441 2310034G01RikA0A286YDL3 209 aa12.14□□□□□ -0.47
Trim47-202ENSMUST00000106441 Ufsp1Q9CZP0 217 aa12.13□□□□□ -0.47
Trim47-202ENSMUST00000106441 Defa20Q45VN2 95 aa12.13□□□□□ -0.47
Trim47-202ENSMUST00000106441 A830005F24RikQ8BRT5 167 aa12.13□□□□□ -0.47
Trim47-202ENSMUST00000106441 Igkv8-34A0A0G2JDU0 121 aa12.12□□□□□ -0.47
Trim47-202ENSMUST00000106441 A730071L15RikQ8C4X0 137 aa12.12□□□□□ -0.47
Trim47-202ENSMUST00000106441 Elof1P60003 83 aa12.11□□□□□ -0.47
Trim47-202ENSMUST00000106441 SnurfQ9WU12 71 aa12.11□□□□□ -0.47
Trim47-202ENSMUST00000106441 Pet100P0DJE0 76 aa12.11□□□□□ -0.47
Trim47-202ENSMUST00000106441 Fam19a3Q7TPG6 132 aa12.11□□□□□ -0.47
Trim47-202ENSMUST00000106441 Snhg11Q4G0K9 87 aa12.1□□□□□ -0.47
Trim47-202ENSMUST00000106441 Gm17577J3QNF7 156 aa12.09□□□□□ -0.47
Trim47-202ENSMUST00000106441 Cdk2ap2Q9CPY4 127 aa12.09□□□□□ -0.47
Trim47-202ENSMUST00000106441 FasnP19096 2504 aaKnown RBP12.09□□□□□ -0.47
Trim47-202ENSMUST00000106441 Mrpl55Q9CZ83 127 aa12.08□□□□□ -0.48
Trim47-202ENSMUST00000106441 Gm17689B3GLJ4 109 aa12.08□□□□□ -0.48
Trim47-202ENSMUST00000106441 AW011738F6S7Q2 159 aa12.08□□□□□ -0.48
Trim47-202ENSMUST00000106441 Dph3Q8K0W9 82 aa12.08□□□□□ -0.48
Trim47-202ENSMUST00000106441 UqcrqQ9CQ69 82 aa12.08□□□□□ -0.48
Trim47-202ENSMUST00000106441 A730009L09RikA0A1B0GS82 72 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 Gm9508A0A1W2P7W0 230 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 H2al1bA0A087WP11 105 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 H2al1kJ3QP08 105 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 H2al1eQ810S6 105 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 H2al1mQ9DAD9 105 aa12.06□□□□□ -0.48
Trim47-202ENSMUST00000106441 Trav14-1A0A0G2JF94 121 aa12.05□□□□□ -0.48
Trim47-202ENSMUST00000106441 Gm7276Q3TYW4 209 aa12.05□□□□□ -0.48
Trim47-202ENSMUST00000106441 Csmd3Q80T79 3707 aa12.04□□□□□ -0.48
Trim47-202ENSMUST00000106441 Huwe1Q7TMY8 4377 aaKnown RBP12.04□□□□□ -0.48
Trim47-202ENSMUST00000106441 Igkv1-88A0A140T8N1 120 aa12.04□□□□□ -0.48
Trim47-202ENSMUST00000106441 Gm5617Q91VN2 117 aa12.03□□□□□ -0.48
Trim47-202ENSMUST00000106441 Camk2n2Q78WH7 79 aa12.02□□□□□ -0.48
Trim47-202ENSMUST00000106441 Cd164Q9R0L9 197 aa12.02□□□□□ -0.48
Trim47-202ENSMUST00000106441 PrkdcP97313 4128 aa12.02□□□□□ -0.48
Trim47-202ENSMUST00000106441 A0A286YCN5 57 aa12.02□□□□□ -0.49
Trim47-202ENSMUST00000106441 Defa27F2Z403 93 aa12.02□□□□□ -0.49
Trim47-202ENSMUST00000106441 Sprr4Q8CGN8 76 aa12.02□□□□□ -0.49
Trim47-202ENSMUST00000106441 Vpreb2P13373 142 aa12.01□□□□□ -0.49
Trim47-202ENSMUST00000106441 Reg3bP35230 175 aa12.01□□□□□ -0.49
Trim47-202ENSMUST00000106441 Dnah17Q69Z23 4481 aa12□□□□□ -0.49
Trim47-202ENSMUST00000106441 P06320 134 aa11.99□□□□□ -0.49
Trim47-202ENSMUST00000106441 Igkv8-28A0A0G2JE47 121 aa11.99□□□□□ -0.49
Trim47-202ENSMUST00000106441 AplnQ9R0R4 77 aa11.99□□□□□ -0.49
Trim47-202ENSMUST00000106441 Pou2af1Q64693 256 aa11.98□□□□□ -0.49
Trim47-202ENSMUST00000106441 Gm10401E9Q3K6 71 aa11.97□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms