RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm35339A0A140LHH9 1649 aa37.71■■■■□ 3.63
Trim47-202ENSMUST00000106441 NischQ80TM9 1593 aa37.5■■■■□ 3.59
Trim47-202ENSMUST00000106441 Abcc9P70170 1546 aa36.37■■■■□ 3.41
Trim47-202ENSMUST00000106441 Abcc8B2RUS7 1588 aa36.05■■■■□ 3.36
Trim47-202ENSMUST00000106441 ScribQ80U72 1612 aa34.4■■■■□ 3.1
Trim47-202ENSMUST00000106441 Kdm5dQ62240 1548 aa33.42■■■□□ 2.94
Trim47-202ENSMUST00000106441 NacadQ5SWP3 1504 aa33.38■■■□□ 2.93
Trim47-202ENSMUST00000106441 Dcaf1Q80TR8 1506 aa33.36■■■□□ 2.93
Trim47-202ENSMUST00000106441 Rhox8Q6VSS7 320 aa33.06■■■□□ 2.88
Trim47-202ENSMUST00000106441 Rb1cc1Q9ESK9 1588 aa32.77■■■□□ 2.84
Trim47-202ENSMUST00000106441 Sycp2Q9CUU3 1500 aa32.69■■■□□ 2.82
Trim47-202ENSMUST00000106441 Ccdc180J3QNE4 1664 aa32.4■■■□□ 2.78
Trim47-202ENSMUST00000106441 Baz1aO88379 1555 aa32.34■■■□□ 2.77
Trim47-202ENSMUST00000106441 Rtl1Q7M732 1744 aa32.31■■■□□ 2.76
Trim47-202ENSMUST00000106441 BicraF8VPZ9 1578 aa32.14■■■□□ 2.74
Trim47-202ENSMUST00000106441 Crybg2B7ZCC2 1516 aa32.05■■■□□ 2.72
Trim47-202ENSMUST00000106441 Zcchc6Q5BLK4 1491 aaKnown RBP31.76■■■□□ 2.68
Trim47-202ENSMUST00000106441 Smarca2Q6DIC0 1577 aa31.46■■■□□ 2.63
Trim47-202ENSMUST00000106441 Pds5bQ4VA53 1446 aaKnown RBP31.09■■■□□ 2.57
Trim47-202ENSMUST00000106441 Cecr2E9Q2Z1 1453 aa31.06■■■□□ 2.56
Trim47-202ENSMUST00000106441 Smarca4Q3TKT4 1613 aaKnown RBP30.97■■■□□ 2.55
Trim47-202ENSMUST00000106441 Atad2bE9Q166 1460 aaKnown RBP30.93■■■□□ 2.54
Trim47-202ENSMUST00000106441 Ccdc136Q3TVA9 1136 aa30.81■■■□□ 2.52
Trim47-202ENSMUST00000106441 Iqgap2Q3UQ44 1575 aa30.72■■■□□ 2.51
Trim47-202ENSMUST00000106441 Rpgrip1Q9EPQ2 1331 aa30.68■■■□□ 2.5
Trim47-202ENSMUST00000106441 Thoc2B1AZI6 1594 aaKnown RBP30.61■■■□□ 2.49
Trim47-202ENSMUST00000106441 Brd4Q9ESU6 1400 aaKnown RBP30.6■■■□□ 2.49
Trim47-202ENSMUST00000106441 Synj1Q8CHC4 1574 aa30.52■■■□□ 2.48
Trim47-202ENSMUST00000106441 Ercc6F8VPZ5 1481 aa30.5■■■□□ 2.47
Trim47-202ENSMUST00000106441 CftrP26361 1476 aa30.48■■■□□ 2.47
Trim47-202ENSMUST00000106441 Cttnbp2B9EJA2 1648 aa30.48■■■□□ 2.47
Trim47-202ENSMUST00000106441 Trim41Q5NCC3 630 aa30.35■■■□□ 2.45
Trim47-202ENSMUST00000106441 Wdr62Q3U3T8 1523 aa30.34■■■□□ 2.45
Trim47-202ENSMUST00000106441 Frmpd1A2AKB4 1549 aa30.27■■■□□ 2.44
Trim47-202ENSMUST00000106441 Dnajc5bQ9CQ94 199 aa30.23■■■□□ 2.43
Trim47-202ENSMUST00000106441 Cc2d2aQ8CFW7 1633 aa30.16■■■□□ 2.42
Trim47-202ENSMUST00000106441 HrcG5E8J6 738 aa30.05■■■□□ 2.4
Trim47-202ENSMUST00000106441 Fam135aQ6NS59 1506 aa30.05■■■□□ 2.4
Trim47-202ENSMUST00000106441 Esf1Q3V1V3 845 aaKnown RBP30■■■□□ 2.39
Trim47-202ENSMUST00000106441 Phldb1Q6PDH0 1371 aaKnown RBP29.95■■■□□ 2.38
Trim47-202ENSMUST00000106441 Unc13aQ4KUS2 1712 aa29.94■■■□□ 2.38
Trim47-202ENSMUST00000106441 Acin1Q9JIX8 1338 aaKnown RBP29.79■■■□□ 2.36
Trim47-202ENSMUST00000106441 Golga3P55937 1487 aa29.76■■■□□ 2.35
Trim47-202ENSMUST00000106441 Baz1bQ9Z277 1479 aa29.67■■■□□ 2.34
Trim47-202ENSMUST00000106441 Top2bQ64511 1612 aa29.66■■■□□ 2.34
Trim47-202ENSMUST00000106441 Cngb1E1AZ71 1325 aa29.66■■■□□ 2.34
Trim47-202ENSMUST00000106441 Ubl4bQ9CQ84 188 aa29.63■■■□□ 2.33
Trim47-202ENSMUST00000106441 Rsf1E9PWW9 1441 aaKnown RBP29.54■■■□□ 2.32
Trim47-202ENSMUST00000106441 Lamc3Q9R0B6 1581 aa29.46■■■□□ 2.31
Trim47-202ENSMUST00000106441 Kif15Q6P9L6 1387 aa29.43■■■□□ 2.3
Trim47-202ENSMUST00000106441 Mrc2Q64449 1479 aa29.35■■■□□ 2.29
Trim47-202ENSMUST00000106441 TnnQ80Z71 1560 aa29.34■■■□□ 2.29
Trim47-202ENSMUST00000106441 Fmn1Q05860 1466 aa29.3■■■□□ 2.28
Trim47-202ENSMUST00000106441 Cux2P70298 1426 aa29.26■■■□□ 2.27
Trim47-202ENSMUST00000106441 Ccdc88bQ4QRL3 1481 aa29.13■■■□□ 2.25
Trim47-202ENSMUST00000106441 Ehmt2Q9Z148 1263 aaKnown RBP29.12■■■□□ 2.25
Trim47-202ENSMUST00000106441 Cep164Q5DU05 1446 aa29.05■■■□□ 2.24
Trim47-202ENSMUST00000106441 Ccdc18Q640L5 1455 aa29.03■■■□□ 2.24
Trim47-202ENSMUST00000106441 Camsap1A2AHC3 1581 aa29.02■■■□□ 2.24
Trim47-202ENSMUST00000106441 Npm1Q61937 292 aaKnown RBP28.98■■■□□ 2.23
Trim47-202ENSMUST00000106441 Chic1Q8CBW7 227 aa28.97■■■□□ 2.23
Trim47-202ENSMUST00000106441 Kif21aQ9QXL2 1672 aa28.92■■■□□ 2.22
Trim47-202ENSMUST00000106441 Il27Q8K3I6 234 aa28.92■■■□□ 2.22
Trim47-202ENSMUST00000106441 Top2aQ01320 1528 aaKnown RBP28.88■■■□□ 2.21
Trim47-202ENSMUST00000106441 Pcgf6Q99NA9 353 aa28.79■■■□□ 2.2
Trim47-202ENSMUST00000106441 LrpprcQ6PB66 1392 aaKnown RBP28.74■■■□□ 2.19
Trim47-202ENSMUST00000106441 Lrriq1Q0P5X1 1673 aa28.69■■■□□ 2.18
Trim47-202ENSMUST00000106441 Dhx29Q6PGC1 1365 aaKnown RBP28.69■■■□□ 2.18
Trim47-202ENSMUST00000106441 Grin2bQ01097 1482 aa28.67■■■□□ 2.18
Trim47-202ENSMUST00000106441 PogzQ8BZH4 1409 aaKnown RBP28.64■■■□□ 2.17
Trim47-202ENSMUST00000106441 Crocc2F6XLV1 1638 aa28.6■■■□□ 2.17
Trim47-202ENSMUST00000106441 Duox2A2AQ99 1517 aa28.53■■■□□ 2.16
Trim47-202ENSMUST00000106441 NrkQ9R0G8 1455 aa28.51■■■□□ 2.15
Trim47-202ENSMUST00000106441 Urb2E9Q7L1 1524 aaKnown RBP28.47■■■□□ 2.15
Trim47-202ENSMUST00000106441 Plb1Q3TTY0 1478 aa28.46■■■□□ 2.15
Trim47-202ENSMUST00000106441 Shroom4Q1W617 1475 aa28.43■■■□□ 2.14
Trim47-202ENSMUST00000106441 Gab3Q8BSM5 595 aa28.42■■■□□ 2.14
Trim47-202ENSMUST00000106441 Efcab5A0JP43 1406 aa28.42■■■□□ 2.14
Trim47-202ENSMUST00000106441 PtprkP35822 1457 aa28.39■■■□□ 2.14
Trim47-202ENSMUST00000106441 Samd9lQ69Z37 1561 aa28.34■■■□□ 2.13
Trim47-202ENSMUST00000106441 Eif4g3Q80XI3 1579 aaKnown RBP28.29■■■□□ 2.12
Trim47-202ENSMUST00000106441 Npm2Q80W85 207 aa28.26■■■□□ 2.11
Trim47-202ENSMUST00000106441 Ift140E9PY46 1464 aa28.26■■■□□ 2.11
Trim47-202ENSMUST00000106441 Rapgef2Q8CHG7 1496 aa28.26■■■□□ 2.11
Trim47-202ENSMUST00000106441 Disp1Q3TDN0 1521 aa28.14■■■□□ 2.1
Trim47-202ENSMUST00000106441 Rad54l2Q99NG0 1466 aa28.12■■■□□ 2.09
Trim47-202ENSMUST00000106441 Pbrm1Q8BSQ9 1634 aaKnown RBP28.1■■■□□ 2.09
Trim47-202ENSMUST00000106441 SynmQ70IV5 1561 aa28.1■■■□□ 2.09
Trim47-202ENSMUST00000106441 Zeb1Q64318 1117 aa28.1■■■□□ 2.09
Trim47-202ENSMUST00000106441 Cep162Q6ZQ06 1403 aa28.06■■■□□ 2.08
Trim47-202ENSMUST00000106441 Mroh2bQ7M6Y6 1581 aa28.06■■■□□ 2.08
Trim47-202ENSMUST00000106441 Eif4g1Q6NZJ6 1600 aaKnown RBP28.05■■■□□ 2.08
Trim47-202ENSMUST00000106441 Rusc2Q80U22 1514 aa28.04■■■□□ 2.08
Trim47-202ENSMUST00000106441 Arhgap35Q91YM2 1499 aa28.03■■■□□ 2.08
Trim47-202ENSMUST00000106441 Magi3Q9EQJ9 1476 aa28.02■■■□□ 2.08
Trim47-202ENSMUST00000106441 Supt5hO55201 1082 aaKnown RBP28.01■■■□□ 2.08
Trim47-202ENSMUST00000106441 Nup160Q9Z0W3 1402 aaKnown RBP28.01■■■□□ 2.07
Trim47-202ENSMUST00000106441 Setd1bQ8CFT2 1985 aa28.01■■■□□ 2.07
Trim47-202ENSMUST00000106441 Grin2aP35436 1464 aa28■■■□□ 2.07
Trim47-202ENSMUST00000106441 Map3k1P53349 1493 aa27.99■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms