RNA–Protein interactions for RNA: ENSMUST00000100942.8

Vamp1-203, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Vamp1, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-203ENSMUST00000100942 E130114P18RikF6S0S7 154 aa8.32□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Gm5153P01627 120 aa8.32□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Vpreb2P13373 142 aa8.32□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Fn1P11276 2477 aaKnown RBP8.31□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Phxr5P08399 672 aa8.31□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv8-16A0A0G2JDG9 121 aa8.31□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Rbm3O89086 153 aaKnown RBP8.31□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv8-26A0A075B5N5 123 aa8.3□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv1-110A0A0B4J1I0 119 aa8.3□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv8-27A0A0G2JF28 120 aa8.3□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv8-30A0A140T8M3 121 aa8.3□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Gm28374F6SG70 93 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Notch2O35516 2470 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Hivep1Q03172 2688 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Igkv8-18A0A0B4J1J3 123 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Gm10320E9PW43 113 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Gm10518F6UQQ9 182 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Fam19a3Q7TPG6 132 aa8.29□□□□□ -1.08
Vamp1-203ENSMUST00000100942 PolqQ8CGS6 2544 aa8.28□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Stab1Q8R4Y4 2571 aa8.28□□□□□ -1.08
Vamp1-203ENSMUST00000100942 P01819 144 aa8.28□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Gm36176A0A1W2P8D5 158 aa8.27□□□□□ -1.08
Vamp1-203ENSMUST00000100942 Ighv8-13A0A075B5Y0 101 aa8.27□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Igkv3-9A0A140T8P4 119 aa8.27□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Gm17689B3GLJ4 109 aa8.27□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Defa28D3Z1V9 94 aa8.27□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Ighv10-1A0A0B4J1J6 119 aa8.27□□□□□ -1.09
Vamp1-203ENSMUST00000100942 ApcQ61315 2845 aa8.26□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Defb37Q7TMD2 62 aa8.26□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Reg3dQ9QUS9 175 aa8.26□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Srrm2Q8BTI8 2703 aaKnown RBP8.26□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Notch1Q01705 2531 aa8.26□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Wfdc17Q5SSJ1 76 aa8.25□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Trav9n-4A0A075B631 113 aa8.25□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Igkv8-24A0A140T8P5 121 aa8.25□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Pde6gP09174 87 aa8.25□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Nsd1O88491 2588 aaKnown RBP8.25□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Ighv2-2A0A075B5P8 116 aa8.24□□□□□ -1.09
Vamp1-203ENSMUST00000100942 P01821 116 aa8.24□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Sec61gP60060 68 aa8.24□□□□□ -1.09
Vamp1-203ENSMUST00000100942 A830005F24RikQ8BRT5 167 aa8.24□□□□□ -1.09
Vamp1-203ENSMUST00000100942 HrnrQ8VHD8 2496 aa8.24□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Gm10401E9Q3K6 71 aa8.23□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Krtap11-1E9Q2E9 183 aa8.23□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Spink8Q09TK9 105 aa8.23□□□□□ -1.09
Vamp1-203ENSMUST00000100942 FlnbQ80X90 2602 aaKnown RBP8.23□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Dnah3Q8BW94 4083 aa8.23□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Csmd3Q80T79 3707 aa8.22□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Igkv1-88A0A140T8N1 120 aa8.22□□□□□ -1.09
Vamp1-203ENSMUST00000100942 Gm10570F6VB42 170 aa8.21□□□□□ -1.1
Vamp1-203ENSMUST00000100942 C530025M09RikF6RGA8 229 aa8.21□□□□□ -1.1
Vamp1-203ENSMUST00000100942 P06320 134 aa8.21□□□□□ -1.1
Vamp1-203ENSMUST00000100942 A930002H24RikQ8C8Y3 163 aa8.2□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Snhg11Q4G0K9 87 aa8.2□□□□□ -1.1
Vamp1-203ENSMUST00000100942 6430550D23RikE9Q1X6 194 aa8.19□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Defb12Q8K4N3 78 aa8.19□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Gm7137J3QMW1 236 aa8.19□□□□□ -1.1
Vamp1-203ENSMUST00000100942 2310034G01RikA0A286YDL3 209 aa8.19□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Spint4Q9D263 159 aa8.19□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Sfta2E9PXB6 77 aa8.18□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Cox7bP56393 80 aa8.18□□□□□ -1.1
Vamp1-203ENSMUST00000100942 9530003J23RikQ8BM26 151 aa8.18□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Dnah6E9Q0B6 4144 aa8.17□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Igkv3-1A0A075B5P1 119 aa8.16□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Igkv8-34A0A0G2JDU0 121 aa8.16□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Igkv1-122A0A140T8M9 119 aa8.16□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Gm9805F6YK59 57 aa8.16□□□□□ -1.1
Vamp1-203ENSMUST00000100942 Cd164Q9R0L9 197 aa8.16□□□□□ -1.1
Vamp1-203ENSMUST00000100942 A730071L15RikQ8C4X0 137 aa8.15□□□□□ -1.11
Vamp1-203ENSMUST00000100942 AplnQ9R0R4 77 aa8.14□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Q8BT88 171 aa8.13□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Defb10Q8R2I8 73 aa8.13□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Dnah10D3YYQ8 4591 aa8.13□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Tcl1b5P56845 121 aa8.13□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Gm16181B0V2H2 73 aa8.12□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Cdc42se1Q8BHL7 80 aa8.12□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Spata3Q9D9T6 193 aa8.12□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Msrb1Q9JLC3 116 aa8.12□□□□□ -1.11
Vamp1-203ENSMUST00000100942 VwfQ8CIZ8 2813 aa8.12□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Reg3bP35230 175 aa8.11□□□□□ -1.11
Vamp1-203ENSMUST00000100942 A0A286YE02 88 aa8.11□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Col6a5A6H584 2640 aa8.11□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Gm10770F7D043 238 aa8.11□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Gm5617Q91VN2 117 aa8.1□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Ufsp1Q9CZP0 217 aa8.1□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Dnah14A0A140LIJ4 4489 aa8.09□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Prr15lQ8JZM2 100 aa8.09□□□□□ -1.11
Vamp1-203ENSMUST00000100942 Sox16Q62247 57 aa8.08□□□□□ -1.12
Vamp1-203ENSMUST00000100942 AI606181Q8C7B9 129 aa8.08□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Smim29Q8R043 75 aa8.08□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Gm11011D3Z3L9 86 aa8.08□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Igkv8-28A0A0G2JE47 121 aa8.06□□□□□ -1.12
Vamp1-203ENSMUST00000100942 A330070K13RikQ8CA53 115 aa8.06□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Defb40Q70KL2 73 aa8.06□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Gm10197F6QEY5 67 aa8.05□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Gm17509Q9CZ61 145 aa8.05□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Igkv3-10A0A0G2JGN0 119 aa8.05□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Coa6Q8BGD8 79 aa8.04□□□□□ -1.12
Vamp1-203ENSMUST00000100942 A730009L09RikA0A1B0GS82 72 aa8.04□□□□□ -1.12
Vamp1-203ENSMUST00000100942 Sslp1Q3UN54 99 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms