RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Sprr1bQ62267 153 aa6.07□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Tln1P26039 2541 aaKnown RBP6.06□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Pkd1l2Q7TN88 2461 aa6.06□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Piezo1E2JF22 2547 aa6.06□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Lypd5Q9D7Z7 256 aa6.06□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Gm7276Q3TYW4 209 aa6.05□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Nav3Q80TN7 2359 aa6.05□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 C530025M09RikF6RGA8 229 aa6.04□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Defb9Q8R2I6 67 aa6.03□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Piezo2Q8CD54 2822 aa6.03□□□□□ -1.44
Pdgfra-201ENSMUST00000000476 Phxr4P15974 95 aa6.02□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 A330070K13RikQ8CA53 115 aa6.02□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Phxr5P08399 672 aa6.01□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Ttc28Q80XJ3 2450 aa6.01□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Cypt15B1AXS0 87 aa6.01□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Uqcr11Q9CPX8 56 aa6□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Hcfc1Q61191 2045 aaKnown RBP6□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Rnase13Q5GAM7 153 aa5.99□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Sptbn4E9PX29 2561 aa5.97□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Anapc11Q9CPX9 84 aa5.97□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Gm11213A0A1B0GR83 88 aa5.97□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Plac8Q9JI48 112 aa5.97□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Notch2O35516 2470 aa5.97□□□□□ -1.45
Pdgfra-201ENSMUST00000000476 Gm3233E9Q2H5 230 aa5.95□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 OxtP35454 125 aa5.95□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Fam104aA2A6P4 185 aa5.95□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 CnbpP53996 178 aaKnown RBP5.94□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Gm26620Q9CY65 116 aa5.93□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Gm20538F6Z9R1 75 aa5.92□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Zcchc13Q9D548 170 aa5.92□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 SetxA2AKX3 2646 aa5.91□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Hivep3A2A884 2348 aa5.9□□□□□ -1.46
Pdgfra-201ENSMUST00000000476 Chtf8P0CG14 533 aa5.9□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Gm10643Q3URG9 111 aa5.9□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 SrcapA0A087WQ44 3271 aa5.9□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Chd8Q09XV5 2582 aaKnown RBP5.9□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Usp9xP70398 2559 aaKnown RBP5.88□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Fam229bQ8CF36 80 aa5.87□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Cep192E9Q4Y4 2514 aaKnown RBP5.87□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Cypt14J3QPF7 87 aa5.86□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Ptpn13Q64512 2453 aa5.86□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Gm21798J3QNU5 87 aa5.85□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 2310034C09RikQ9D746 214 aa5.85□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Pla2g10Q9QXX3 151 aa5.85□□□□□ -1.47
Pdgfra-201ENSMUST00000000476 Gm7138L7N2C3 230 aa5.83□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Gm3238W4VSP7 230 aa5.83□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Smim29Q8R043 75 aa5.83□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 NbdyA0A0N4SUI7 68 aa5.83□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 TrrapQ80YV3 2565 aaKnown RBP5.81□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 CriptO70333 101 aa5.8□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Gm9821Q8K076 103 aa5.8□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 PtprqP0C5E4 2300 aa5.8□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Zfp462B1AWL2 2495 aaKnown RBP5.8□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Gm10065F6TJM2 114 aa5.79□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Gm11565A2A4M7 156 aa5.79□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Lelp1Q9DAE3 120 aa5.78□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Gm9955Q8CEJ8 102 aa5.78□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 Epg5Q80TA9 2572 aa5.78□□□□□ -1.48
Pdgfra-201ENSMUST00000000476 6030445D17RikE9Q8F9 148 aa5.77□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Gm4491E0CX42 125 aa5.76□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Gm3880A0A1B0GSB3 72 aa5.75□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Gm7137J3QMW1 236 aa5.74□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Gm10320E9PW43 113 aa5.74□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Bahcc1Q3UHR0 2643 aa5.72□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 MtorQ9JLN9 2549 aa5.71□□□□□ -1.49
Pdgfra-201ENSMUST00000000476 Spink7Q6IE32 76 aa5.71□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Gm10139O88245 57 aa5.71□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Ankrd17Q99NH0 2603 aaKnown RBP5.69□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Odf3bQ5M8M2 238 aa5.69□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Setd2E9Q5F9 2537 aa5.69□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Sprr1aQ62266 144 aa5.65□□□□□ -1.5
Pdgfra-201ENSMUST00000000476 Krtap15-1Q9QZU5 150 aa5.64□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 Gm9508A0A1W2P7W0 230 aa5.62□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 PolqQ8CGS6 2544 aa5.62□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 Gm17349F7BGH6 99 aa5.62□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 Abca12E9Q876 2595 aa5.6□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 Cystm1Q8K353 104 aa5.6□□□□□ -1.51
Pdgfra-201ENSMUST00000000476 Gm37013Q8K491 104 aa5.59□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Gm16253D3Z167 63 aa5.58□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Unc79Q0KK59 2596 aa5.56□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Gm36176A0A1W2P8D5 158 aa5.56□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 CenpfE9Q3P4 2997 aaKnown RBP5.56□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Camk2n1Q6QWF9 78 aa5.55□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Fam229aB2KGE5 128 aa5.54□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 CicQ924A2 2510 aa5.54□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Zfp292Q9Z2U2 2698 aa5.54□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 A730071L15RikQ8C4X0 137 aa5.54□□□□□ -1.52
Pdgfra-201ENSMUST00000000476 Krtap29-1A2A5X4 342 aa5.52□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Nbeal1E9PYP2 2688 aa5.5□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Gm3646F6S692 53 aa5.5□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Nsd1O88491 2588 aaKnown RBP5.5□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Dmbt1Q60997 2085 aa5.5□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Sec61bQ9CQS8 96 aaKnown RBP5.49□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Gm5767A0A0J9YTU8 78 aa5.46□□□□□ -1.53
Pdgfra-201ENSMUST00000000476 Gm9195A0A140LHT4 2805 aa5.44□□□□□ -1.54
Pdgfra-201ENSMUST00000000476 Rpl37Q9D823 97 aa5.43□□□□□ -1.54
Pdgfra-201ENSMUST00000000476 Usp9yF8VPU6 2556 aa5.43□□□□□ -1.54
Pdgfra-201ENSMUST00000000476 Romo1P60603 79 aa5.43□□□□□ -1.54
Pdgfra-201ENSMUST00000000476 Golgb1E9PVZ8 3238 aa5.42□□□□□ -1.54
Pdgfra-201ENSMUST00000000476 2310050C09RikG5E8Z3 280 aa5.41□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms