RNA–Protein interactions for RNA: ENSMUST00000000476.14

Pdgfra-201, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,549 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-201ENSMUST00000000476 Rhox8Q6VSS7 320 aa16.33■□□□□ 0.2
Pdgfra-201ENSMUST00000000476 Rpgrip1Q9EPQ2 1331 aa14.88□□□□□ -0.03
Pdgfra-201ENSMUST00000000476 Ehmt2Q9Z148 1263 aaKnown RBP14.67□□□□□ -0.06
Pdgfra-201ENSMUST00000000476 Ccdc136Q3TVA9 1136 aa14.43□□□□□ -0.1
Pdgfra-201ENSMUST00000000476 Cngb1E1AZ71 1325 aa14.43□□□□□ -0.1
Pdgfra-201ENSMUST00000000476 Esf1Q3V1V3 845 aaKnown RBP14.42□□□□□ -0.1
Pdgfra-201ENSMUST00000000476 Las1lA2BE28 776 aaKnown RBP14.36□□□□□ -0.11
Pdgfra-201ENSMUST00000000476 Wdr66E9Q743 1299 aa14.36□□□□□ -0.11
Pdgfra-201ENSMUST00000000476 Ube2uB1AUC4 352 aa14.27□□□□□ -0.13
Pdgfra-201ENSMUST00000000476 Gab3Q8BSM5 595 aa14.21□□□□□ -0.14
Pdgfra-201ENSMUST00000000476 Zeb1Q64318 1117 aa14.2□□□□□ -0.14
Pdgfra-201ENSMUST00000000476 Npm2Q80W85 207 aa14.15□□□□□ -0.14
Pdgfra-201ENSMUST00000000476 Trim41Q5NCC3 630 aa14.14□□□□□ -0.15
Pdgfra-201ENSMUST00000000476 Pelp1Q9DBD5 1123 aaKnown RBP14.13□□□□□ -0.15
Pdgfra-201ENSMUST00000000476 NischQ80TM9 1593 aa14.05□□□□□ -0.16
Pdgfra-201ENSMUST00000000476 Myt1lP97500 1187 aa14.01□□□□□ -0.17
Pdgfra-201ENSMUST00000000476 Acin1Q9JIX8 1338 aaKnown RBP13.72□□□□□ -0.21
Pdgfra-201ENSMUST00000000476 UbtfP25976 765 aaKnown RBP13.71□□□□□ -0.22
Pdgfra-201ENSMUST00000000476 NefmP08553 848 aa13.69□□□□□ -0.22
Pdgfra-201ENSMUST00000000476 CenpbP27790 599 aa13.65□□□□□ -0.22
Pdgfra-201ENSMUST00000000476 Stra8P70278 393 aa13.62□□□□□ -0.23
Pdgfra-201ENSMUST00000000476 Slc24a1Q91WD8 1130 aa13.56□□□□□ -0.24
Pdgfra-201ENSMUST00000000476 Ccdc180J3QNE4 1664 aa13.56□□□□□ -0.24
Pdgfra-201ENSMUST00000000476 Amer1Q7TS75 1132 aa13.55□□□□□ -0.24
Pdgfra-201ENSMUST00000000476 Il27Q8K3I6 234 aa13.49□□□□□ -0.25
Pdgfra-201ENSMUST00000000476 Rtl1Q7M732 1744 aa13.41□□□□□ -0.26
Pdgfra-201ENSMUST00000000476 HrcG5E8J6 738 aa13.41□□□□□ -0.26
Pdgfra-201ENSMUST00000000476 Cdk11bP24788 784 aaKnown RBP13.34□□□□□ -0.27
Pdgfra-201ENSMUST00000000476 Ap3b1Q9Z1T1 1105 aa13.33□□□□□ -0.28
Pdgfra-201ENSMUST00000000476 Fam50aQ9WV03 339 aaKnown RBP13.3□□□□□ -0.28
Pdgfra-201ENSMUST00000000476 Zcchc6Q5BLK4 1491 aaKnown RBP13.3□□□□□ -0.28
Pdgfra-201ENSMUST00000000476 NrdcQ8BHG1 1161 aa13.28□□□□□ -0.28
Pdgfra-201ENSMUST00000000476 Anp32bQ9EST5 272 aaKnown RBP13.28□□□□□ -0.28
Pdgfra-201ENSMUST00000000476 Neurod1Q60867 357 aa13.26□□□□□ -0.29
Pdgfra-201ENSMUST00000000476 NclP09405 707 aaKnown RBP13.24□□□□□ -0.29
Pdgfra-201ENSMUST00000000476 Os9Q8K2C7 672 aa13.2□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Tnnt3Q9QZ47 272 aa13.2□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Abcc9P70170 1546 aa13.18□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 NeflP08551 543 aa13.18□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Pcgf6Q99NA9 353 aa13.18□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Nop58Q6DFW4 536 aaKnown RBP13.16□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Ttbk1Q6PCN3 1308 aa13.16□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 Eif5bQ05D44 1216 aaKnown RBP13.15□□□□□ -0.3
Pdgfra-201ENSMUST00000000476 4933416C03RikQ3V063 378 aa13.13□□□□□ -0.31
Pdgfra-201ENSMUST00000000476 Gm35339A0A140LHH9 1649 aa13.1□□□□□ -0.31
Pdgfra-201ENSMUST00000000476 TonslQ6NZL6 1363 aa13.1□□□□□ -0.31
Pdgfra-201ENSMUST00000000476 Ppargc1bQ8VHJ7 1014 aa13.09□□□□□ -0.31
Pdgfra-201ENSMUST00000000476 4930567H17RikQ3V0K5 233 aa13.07□□□□□ -0.32
Pdgfra-201ENSMUST00000000476 Myt1Q8CFC2 1127 aa12.99□□□□□ -0.33
Pdgfra-201ENSMUST00000000476 Supt5hO55201 1082 aaKnown RBP12.98□□□□□ -0.33
Pdgfra-201ENSMUST00000000476 Mier1Q5UAK0 511 aa12.96□□□□□ -0.34
Pdgfra-201ENSMUST00000000476 Zbtb7cQ8VCZ7 619 aa12.91□□□□□ -0.34
Pdgfra-201ENSMUST00000000476 Npm1Q61937 292 aaKnown RBP12.9□□□□□ -0.34
Pdgfra-201ENSMUST00000000476 Lmod2Q3UHZ5 550 aa12.9□□□□□ -0.34
Pdgfra-201ENSMUST00000000476 Plekhg3Q4VAC9 1341 aa12.85□□□□□ -0.35
Pdgfra-201ENSMUST00000000476 Hnrnpul2Q00PI9 745 aaKnown RBP12.84□□□□□ -0.35
Pdgfra-201ENSMUST00000000476 Rtl5Q5DTT4 599 aa12.83□□□□□ -0.36
Pdgfra-201ENSMUST00000000476 Gm13697A2AK42 830 aa12.81□□□□□ -0.36
Pdgfra-201ENSMUST00000000476 ClspnQ80YR7 1315 aa12.78□□□□□ -0.36
Pdgfra-201ENSMUST00000000476 Ifnlr1Q8CGK5 535 aa12.75□□□□□ -0.37
Pdgfra-201ENSMUST00000000476 Chic1Q8CBW7 227 aa12.74□□□□□ -0.37
Pdgfra-201ENSMUST00000000476 Erich6D3Z6S9 713 aa12.73□□□□□ -0.37
Pdgfra-201ENSMUST00000000476 Zbtb4Q5F293 982 aa12.72□□□□□ -0.37
Pdgfra-201ENSMUST00000000476 Nlrp6Q91WS2 869 aa12.72□□□□□ -0.37
Pdgfra-201ENSMUST00000000476 Atp1b4Q99ME6 356 aa12.7□□□□□ -0.38
Pdgfra-201ENSMUST00000000476 Anp32aO35381 247 aa12.68□□□□□ -0.38
Pdgfra-201ENSMUST00000000476 Abcc8B2RUS7 1588 aa12.67□□□□□ -0.38
Pdgfra-201ENSMUST00000000476 Brd4Q9ESU6 1400 aaKnown RBP12.63□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Hdac5Q9Z2V6 1113 aa12.63□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Prdm10Q3UTQ7 1184 aa12.62□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Polr3glQ8R0C0 218 aa12.62□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Mapk8ip2Q9ERE9 830 aa12.62□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Clip1Q922J3 1391 aa12.61□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 DaxxO35613 739 aa12.6□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Eid3Q3V124 375 aa12.59□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Gm13695A2AK44 830 aa12.59□□□□□ -0.39
Pdgfra-201ENSMUST00000000476 Fkbp15Q6P9Q6 1216 aaKnown RBP12.58□□□□□ -0.4
Pdgfra-201ENSMUST00000000476 Cep164Q5DU05 1446 aa12.53□□□□□ -0.4
Pdgfra-201ENSMUST00000000476 Ccer2J3QPU5 274 aa12.5□□□□□ -0.41
Pdgfra-201ENSMUST00000000476 ArxO35085 564 aa12.49□□□□□ -0.41
Pdgfra-201ENSMUST00000000476 Dcaf1Q80TR8 1506 aa12.48□□□□□ -0.41
Pdgfra-201ENSMUST00000000476 Csrnp3P59055 597 aa12.46□□□□□ -0.41
Pdgfra-201ENSMUST00000000476 Sall2Q9QX96 1004 aa12.46□□□□□ -0.41
Pdgfra-201ENSMUST00000000476 Gm38655A0A286YDK6 273 aa12.44□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 Rb1cc1Q9ESK9 1588 aa12.43□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 Ubl4bQ9CQ84 188 aa12.42□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 Plppr3Q7TPB0 716 aa12.41□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 DiexfQ8BTT6 772 aaKnown RBP12.41□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 Chic2Q9D9G3 165 aa12.4□□□□□ -0.42
Pdgfra-201ENSMUST00000000476 Anks4bQ8K3X6 423 aa12.39□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Upf2A2AT37 1269 aaKnown RBP12.38□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Rangap1P46061 589 aaKnown RBP12.37□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Calr4Q3TQS0 420 aa12.37□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Rad21Q61550 635 aaKnown RBP12.36□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Ppp4r2Q0VGB7 417 aa12.34□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 BlmO88700 1416 aa12.34□□□□□ -0.43
Pdgfra-201ENSMUST00000000476 Clstn2Q9ER65 966 aa12.33□□□□□ -0.44
Pdgfra-201ENSMUST00000000476 Mrs2Q5NCE8 434 aa12.3□□□□□ -0.44
Pdgfra-201ENSMUST00000000476 Aplp2Q06335 707 aa12.29□□□□□ -0.44
Pdgfra-201ENSMUST00000000476 Safb2Q80YR5 991 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 90.3 ms