RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Gm11213A0A1B0GR83 88 aa14.32□□□□□ -0.12
Trim27-207ENSMUST00000223065 Anapc13Q8R034 74 aa14.32□□□□□ -0.12
Trim27-207ENSMUST00000223065 2010109I03RikQ9CQ11 111 aa14.32□□□□□ -0.12
Trim27-207ENSMUST00000223065 Tcl1b5P56845 121 aa14.3□□□□□ -0.12
Trim27-207ENSMUST00000223065 E130208F15RikQ3UPV3 143 aa14.3□□□□□ -0.12
Trim27-207ENSMUST00000223065 Defb29Q8BGW9 78 aa14.3□□□□□ -0.12
Trim27-207ENSMUST00000223065 Notch1Q01705 2531 aa14.3□□□□□ -0.12
Trim27-207ENSMUST00000223065 Trav13-2A0A075B649 110 aa14.29□□□□□ -0.12
Trim27-207ENSMUST00000223065 1810062G17RikG3X8Y2 129 aa14.29□□□□□ -0.12
Trim27-207ENSMUST00000223065 Tmem213Q08EA8 116 aa14.29□□□□□ -0.12
Trim27-207ENSMUST00000223065 Igkv8-24A0A140T8P5 121 aa14.28□□□□□ -0.12
Trim27-207ENSMUST00000223065 Gm16381A0A1Y7VKT9 73 aa14.28□□□□□ -0.12
Trim27-207ENSMUST00000223065 Ighv2-9A0A075B5Q5 116 aa14.27□□□□□ -0.12
Trim27-207ENSMUST00000223065 1700020N15RikL7MTX3 112 aa14.27□□□□□ -0.12
Trim27-207ENSMUST00000223065 TeppQ6IMH0 216 aa14.27□□□□□ -0.12
Trim27-207ENSMUST00000223065 Xlr5cQ9JJR2 179 aa14.27□□□□□ -0.12
Trim27-207ENSMUST00000223065 Kmt2aP55200 3966 aa14.27□□□□□ -0.12
Trim27-207ENSMUST00000223065 Igkv8-18A0A0B4J1J3 123 aa14.27□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm9903Q8C9Y8 129 aa14.26□□□□□ -0.13
Trim27-207ENSMUST00000223065 MifP34884 115 aaKnown RBP14.25□□□□□ -0.13
Trim27-207ENSMUST00000223065 4930524J08RikQ9CUJ5 163 aa14.25□□□□□ -0.13
Trim27-207ENSMUST00000223065 4930556J24RikQ9D4U7 146 aa14.25□□□□□ -0.13
Trim27-207ENSMUST00000223065 Smim26Q3V460 107 aa14.25□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm16181B0V2H2 73 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Dnal4Q9DCM4 105 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm7137J3QMW1 236 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm5153P01627 120 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Reg3bP35230 175 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Csdc2Q91YQ3 154 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 AplnQ9R0R4 77 aa14.24□□□□□ -0.13
Trim27-207ENSMUST00000223065 Igkv1-35A0A0G2JDE5 120 aa14.23□□□□□ -0.13
Trim27-207ENSMUST00000223065 Acyp1P56376 99 aa14.23□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm5142Q8C5X9 133 aa14.23□□□□□ -0.13
Trim27-207ENSMUST00000223065 BB014433Q8C5R5 389 aa14.22□□□□□ -0.13
Trim27-207ENSMUST00000223065 Ighv13-2A0A0A6YWN3 119 aa14.22□□□□□ -0.13
Trim27-207ENSMUST00000223065 Igkv8-16A0A0G2JDG9 121 aa14.22□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm10518F6UQQ9 182 aa14.22□□□□□ -0.13
Trim27-207ENSMUST00000223065 VwfQ8CIZ8 2813 aa14.21□□□□□ -0.13
Trim27-207ENSMUST00000223065 Gm28539A0A087WSL9 92 aa14.2□□□□□ -0.14
Trim27-207ENSMUST00000223065 Trav13n-2A0A0G2JF93 110 aa14.2□□□□□ -0.14
Trim27-207ENSMUST00000223065 P01819 144 aa14.2□□□□□ -0.14
Trim27-207ENSMUST00000223065 5730596B20RikQ8BQ08 205 aa14.2□□□□□ -0.14
Trim27-207ENSMUST00000223065 Prr13Q9CQJ5 137 aa14.19□□□□□ -0.14
Trim27-207ENSMUST00000223065 Wfdc12Q9JHY3 85 aa14.19□□□□□ -0.14
Trim27-207ENSMUST00000223065 Cox7bP56393 80 aa14.19□□□□□ -0.14
Trim27-207ENSMUST00000223065 Gm10845Q3UNY9 185 aa14.19□□□□□ -0.14
Trim27-207ENSMUST00000223065 TnxbO35452 4006 aa14.18□□□□□ -0.14
Trim27-207ENSMUST00000223065 Trav3-4A0A075B654 114 aa14.17□□□□□ -0.14
Trim27-207ENSMUST00000223065 CnbpP53996 178 aaKnown RBP14.16□□□□□ -0.14
Trim27-207ENSMUST00000223065 Lyrm7Q9DA03 104 aa14.15□□□□□ -0.14
Trim27-207ENSMUST00000223065 Reg3dQ9QUS9 175 aa14.15□□□□□ -0.14
Trim27-207ENSMUST00000223065 Gm17509Q9CZ61 145 aa14.15□□□□□ -0.14
Trim27-207ENSMUST00000223065 Defa2P28309 93 aa14.14□□□□□ -0.15
Trim27-207ENSMUST00000223065 Cox7b2Q9D2H1 82 aa14.13□□□□□ -0.15
Trim27-207ENSMUST00000223065 Ube2d4D3YUH6 135 aa14.12□□□□□ -0.15
Trim27-207ENSMUST00000223065 Gm5617Q91VN2 117 aa14.12□□□□□ -0.15
Trim27-207ENSMUST00000223065 Znf414Q9DCK4 299 aa14.12□□□□□ -0.15
Trim27-207ENSMUST00000223065 Igkv4-92A0A0B4J1I2 117 aa14.12□□□□□ -0.15
Trim27-207ENSMUST00000223065 9430015G10RikA2ASP7 199 aa14.11□□□□□ -0.15
Trim27-207ENSMUST00000223065 Sslp1Q3UN54 99 aa14.1□□□□□ -0.15
Trim27-207ENSMUST00000223065 Dnah3Q8BW94 4083 aa14.1□□□□□ -0.15
Trim27-207ENSMUST00000223065 Rpl39lQ9CQD0 51 aa14.1□□□□□ -0.15
Trim27-207ENSMUST00000223065 A730009L09RikA0A1B0GS82 72 aa14.08□□□□□ -0.15
Trim27-207ENSMUST00000223065 Hbb-b2P02089 147 aa14.07□□□□□ -0.16
Trim27-207ENSMUST00000223065 AY074887Q8R5F9 132 aa14.07□□□□□ -0.16
Trim27-207ENSMUST00000223065 Ufsp1Q9CZP0 217 aa14.07□□□□□ -0.16
Trim27-207ENSMUST00000223065 Xcl1P47993 114 aa14.07□□□□□ -0.16
Trim27-207ENSMUST00000223065 Trav14d-3-dv8A0A075B619 120 aa14.06□□□□□ -0.16
Trim27-207ENSMUST00000223065 Rpl18aP62717 176 aaKnown RBP14.06□□□□□ -0.16
Trim27-207ENSMUST00000223065 Klk12B2RVZ0 247 aa14.05□□□□□ -0.16
Trim27-207ENSMUST00000223065 Gm9805F6YK59 57 aa14.05□□□□□ -0.16
Trim27-207ENSMUST00000223065 Sprr4Q8CGN8 76 aa14.05□□□□□ -0.16
Trim27-207ENSMUST00000223065 A0A286YCN5 57 aa14.03□□□□□ -0.16
Trim27-207ENSMUST00000223065 Atp5eP56382 52 aa14.02□□□□□ -0.16
Trim27-207ENSMUST00000223065 Mrpl52Q9D0Y8 121 aa14.02□□□□□ -0.16
Trim27-207ENSMUST00000223065 Gm10320E9PW43 113 aa14.02□□□□□ -0.17
Trim27-207ENSMUST00000223065 Defa20Q45VN2 95 aa14.02□□□□□ -0.17
Trim27-207ENSMUST00000223065 Camk2n2Q78WH7 79 aa14.02□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm10770F7D043 238 aa14.01□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm10735Q3US96 136 aa14.01□□□□□ -0.17
Trim27-207ENSMUST00000223065 Trav14-1A0A0G2JF94 121 aa14□□□□□ -0.17
Trim27-207ENSMUST00000223065 Ifitm6A0A1B0GS75 124 aa14□□□□□ -0.17
Trim27-207ENSMUST00000223065 SmcpP15265 143 aa14□□□□□ -0.17
Trim27-207ENSMUST00000223065 Smim20D3Z7Q2 69 aa14□□□□□ -0.17
Trim27-207ENSMUST00000223065 Dnah10D3YYQ8 4591 aa13.99□□□□□ -0.17
Trim27-207ENSMUST00000223065 Dnah6E9Q0B6 4144 aa13.99□□□□□ -0.17
Trim27-207ENSMUST00000223065 Ighv10-1A0A0B4J1J6 119 aa13.98□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm10251J3QPM5 127 aa13.98□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm16485Q8C4B7 115 aa13.98□□□□□ -0.17
Trim27-207ENSMUST00000223065 Tenm2Q9WTS5 2764 aa13.98□□□□□ -0.17
Trim27-207ENSMUST00000223065 Igkv4-58A0A0G2JGI6 119 aa13.98□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm7102J3QQ10 178 aa13.97□□□□□ -0.17
Trim27-207ENSMUST00000223065 Gm17577J3QNF7 156 aa13.96□□□□□ -0.17
Trim27-207ENSMUST00000223065 Igkv2-109A0A075B5K6 120 aa13.95□□□□□ -0.18
Trim27-207ENSMUST00000223065 Dnah14A0A140LIJ4 4489 aa13.93□□□□□ -0.18
Trim27-207ENSMUST00000223065 2310034G01RikA0A286YDL3 209 aa13.92□□□□□ -0.18
Trim27-207ENSMUST00000223065 Igkv1-88A0A140T8N1 120 aa13.91□□□□□ -0.18
Trim27-207ENSMUST00000223065 Pkd1l1Q8R526 2615 aa13.91□□□□□ -0.18
Trim27-207ENSMUST00000223065 AW011738F6S7Q2 159 aa13.91□□□□□ -0.18
Trim27-207ENSMUST00000223065 Cdk2ap2Q9CPY4 127 aa13.91□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 226.9 ms