RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Krtap26-1Q9D7N2 215 aa11.63□□□□□ -0.55
Usp47-201ENSMUST00000106653 Notch2O35516 2470 aa11.63□□□□□ -0.55
Usp47-201ENSMUST00000106653 Cd164Q9R0L9 197 aa11.63□□□□□ -0.55
Usp47-201ENSMUST00000106653 Gm10267M0QWD8 85 aa11.62□□□□□ -0.55
Usp47-201ENSMUST00000106653 Gm3250E9Q1M3 230 aa11.62□□□□□ -0.55
Usp47-201ENSMUST00000106653 Ighv1-56A0A0A6YXG2 117 aa11.61□□□□□ -0.55
Usp47-201ENSMUST00000106653 Sox16Q62247 57 aa11.61□□□□□ -0.55
Usp47-201ENSMUST00000106653 P84750 121 aa11.61□□□□□ -0.55
Usp47-201ENSMUST00000106653 Pou2af1Q64693 256 aa11.61□□□□□ -0.55
Usp47-201ENSMUST00000106653 MobpQ9D2P8 170 aa11.61□□□□□ -0.55
Usp47-201ENSMUST00000106653 Defb45Q3V490 66 aa11.6□□□□□ -0.55
Usp47-201ENSMUST00000106653 Ndufb1P0DN34 57 aa11.59□□□□□ -0.55
Usp47-201ENSMUST00000106653 TrrapQ80YV3 2565 aaKnown RBP11.59□□□□□ -0.55
Usp47-201ENSMUST00000106653 E130208F15RikQ3UPV3 143 aa11.58□□□□□ -0.56
Usp47-201ENSMUST00000106653 1700074P13RikQ9D9G7 251 aa11.58□□□□□ -0.56
Usp47-201ENSMUST00000106653 Ndufs5Q99LY9 106 aa11.57□□□□□ -0.56
Usp47-201ENSMUST00000106653 Apoc4Q61268 124 aa11.56□□□□□ -0.56
Usp47-201ENSMUST00000106653 Gm26661M0QWV4 156 aa11.56□□□□□ -0.56
Usp47-201ENSMUST00000106653 Igkv3-7A0A0G2JE31 119 aa11.55□□□□□ -0.56
Usp47-201ENSMUST00000106653 Gm28230A0A0A0MQ91 144 aa11.55□□□□□ -0.56
Usp47-201ENSMUST00000106653 Defb11Q8R2I7 77 aa11.55□□□□□ -0.56
Usp47-201ENSMUST00000106653 SvipQ3UZP4 77 aa11.54□□□□□ -0.56
Usp47-201ENSMUST00000106653 Defb38Q7TNV7 63 aa11.54□□□□□ -0.56
Usp47-201ENSMUST00000106653 UqcrqQ9CQ69 82 aa11.53□□□□□ -0.56
Usp47-201ENSMUST00000106653 4930519P11RikQ9CUJ8 166 aa11.52□□□□□ -0.57
Usp47-201ENSMUST00000106653 Snhg11Q4G0K9 87 aa11.52□□□□□ -0.57
Usp47-201ENSMUST00000106653 Defb37Q7TMD2 62 aa11.51□□□□□ -0.57
Usp47-201ENSMUST00000106653 Gm9887F6RFI0 207 aa11.5□□□□□ -0.57
Usp47-201ENSMUST00000106653 Spata3Q9D9T6 193 aa11.5□□□□□ -0.57
Usp47-201ENSMUST00000106653 Gm11627A6PWP4 55 aa11.5□□□□□ -0.57
Usp47-201ENSMUST00000106653 Gm19935A0A1B0GSF9 52 aa11.5□□□□□ -0.57
Usp47-201ENSMUST00000106653 Sostdc1Q9CQN4 206 aa11.5□□□□□ -0.57
Usp47-201ENSMUST00000106653 Wfdc6bF6ULY1 148 aa11.49□□□□□ -0.57
Usp47-201ENSMUST00000106653 Defb39Q70KL3 74 aa11.48□□□□□ -0.57
Usp47-201ENSMUST00000106653 Wfdc17Q5SSJ1 76 aa11.47□□□□□ -0.57
Usp47-201ENSMUST00000106653 Csdc2Q91YQ3 154 aa11.47□□□□□ -0.57
Usp47-201ENSMUST00000106653 P01819 144 aa11.47□□□□□ -0.57
Usp47-201ENSMUST00000106653 Cox6a2P43023 97 aa11.46□□□□□ -0.57
Usp47-201ENSMUST00000106653 Gm10772F7AIG4 85 aa11.46□□□□□ -0.57
Usp47-201ENSMUST00000106653 Cdip1Q9DB75 208 aa11.46□□□□□ -0.57
Usp47-201ENSMUST00000106653 Bahcc1Q3UHR0 2643 aa11.46□□□□□ -0.58
Usp47-201ENSMUST00000106653 Msrb1Q9JLC3 116 aa11.46□□□□□ -0.58
Usp47-201ENSMUST00000106653 Hivep3A2A884 2348 aa11.45□□□□□ -0.58
Usp47-201ENSMUST00000106653 Gm10642Q3TWM1 71 aa11.44□□□□□ -0.58
Usp47-201ENSMUST00000106653 Psors1c2Q80ZC9 134 aa11.44□□□□□ -0.58
Usp47-201ENSMUST00000106653 Dmac1Q9CQ00 111 aa11.43□□□□□ -0.58
Usp47-201ENSMUST00000106653 Chchd10Q7TNL9 138 aa11.43□□□□□ -0.58
Usp47-201ENSMUST00000106653 Reg3aO09037 175 aa11.43□□□□□ -0.58
Usp47-201ENSMUST00000106653 Serp1Q9Z1W5 66 aa11.42□□□□□ -0.58
Usp47-201ENSMUST00000106653 Gm9903Q8C9Y8 129 aa11.42□□□□□ -0.58
Usp47-201ENSMUST00000106653 Mrpl34Q99N91 92 aa11.42□□□□□ -0.58
Usp47-201ENSMUST00000106653 1700018G05RikA0A1B0GSI2 66 aa11.41□□□□□ -0.58
Usp47-201ENSMUST00000106653 Elof1P60003 83 aa11.41□□□□□ -0.58
Usp47-201ENSMUST00000106653 Igkv8-19A0A0G2JFN8 121 aa11.4□□□□□ -0.58
Usp47-201ENSMUST00000106653 Fam19a3Q7TPG6 132 aa11.39□□□□□ -0.59
Usp47-201ENSMUST00000106653 Zfp462B1AWL2 2495 aaKnown RBP11.39□□□□□ -0.59
Usp47-201ENSMUST00000106653 Ighv2-5A0A0A6YY69 116 aa11.39□□□□□ -0.59
Usp47-201ENSMUST00000106653 MtorQ9JLN9 2549 aa11.36□□□□□ -0.59
Usp47-201ENSMUST00000106653 2310034G01RikA0A286YDL3 209 aa11.34□□□□□ -0.59
Usp47-201ENSMUST00000106653 Hcfc1Q61191 2045 aaKnown RBP11.34□□□□□ -0.59
Usp47-201ENSMUST00000106653 Epg5Q80TA9 2572 aa11.34□□□□□ -0.59
Usp47-201ENSMUST00000106653 Igkv8-27A0A0G2JF28 120 aa11.34□□□□□ -0.59
Usp47-201ENSMUST00000106653 Znf414Q9DCK4 299 aa11.34□□□□□ -0.59
Usp47-201ENSMUST00000106653 Gm10570F6VB42 170 aa11.33□□□□□ -0.6
Usp47-201ENSMUST00000106653 Phf5aP83870 110 aaKnown RBP11.33□□□□□ -0.6
Usp47-201ENSMUST00000106653 Setd2E9Q5F9 2537 aa11.33□□□□□ -0.6
Usp47-201ENSMUST00000106653 Gm42715A0A087WP63 3095 aaKnown RBP11.33□□□□□ -0.6
Usp47-201ENSMUST00000106653 H2al1mQ9DAD9 105 aa11.32□□□□□ -0.6
Usp47-201ENSMUST00000106653 SnurfQ9WU12 71 aa11.32□□□□□ -0.6
Usp47-201ENSMUST00000106653 CenpfE9Q3P4 2997 aaKnown RBP11.31□□□□□ -0.6
Usp47-201ENSMUST00000106653 9230102O04RikA2ASX7 82 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 Gm10837Q3UTT8 145 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 Ighv2-2A0A075B5P8 116 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 Gm21886J3QJU9 214 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 P01821 116 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 4930518I15RikQ3V2W7 57 aa11.3□□□□□ -0.6
Usp47-201ENSMUST00000106653 Gm10337F7DEP7 55 aa11.29□□□□□ -0.6
Usp47-201ENSMUST00000106653 Prol1E9PYQ4 312 aa11.29□□□□□ -0.6
Usp47-201ENSMUST00000106653 Abca12E9Q876 2595 aa11.29□□□□□ -0.6
Usp47-201ENSMUST00000106653 AI606181Q8C7B9 129 aa11.28□□□□□ -0.6
Usp47-201ENSMUST00000106653 AplnQ9R0R4 77 aa11.28□□□□□ -0.6
Usp47-201ENSMUST00000106653 Coa6Q8BGD8 79 aa11.27□□□□□ -0.6
Usp47-201ENSMUST00000106653 Krtap11-1E9Q2E9 183 aa11.27□□□□□ -0.61
Usp47-201ENSMUST00000106653 Lypd5Q9D7Z7 256 aa11.27□□□□□ -0.61
Usp47-201ENSMUST00000106653 Gm44790A0A0N4SV91 103 aa11.26□□□□□ -0.61
Usp47-201ENSMUST00000106653 H2al1kJ3QP08 105 aa11.26□□□□□ -0.61
Usp47-201ENSMUST00000106653 AI854703Q8BIN3 203 aa11.25□□□□□ -0.61
Usp47-201ENSMUST00000106653 Gm10770F7D043 238 aa11.25□□□□□ -0.61
Usp47-201ENSMUST00000106653 6430550D23RikE9Q1X6 194 aa11.24□□□□□ -0.61
Usp47-201ENSMUST00000106653 Zfp292Q9Z2U2 2698 aa11.24□□□□□ -0.61
Usp47-201ENSMUST00000106653 1810062G17RikG3X8Y2 129 aa11.22□□□□□ -0.61
Usp47-201ENSMUST00000106653 Ep400Q8CHI8 3072 aaKnown RBP11.22□□□□□ -0.61
Usp47-201ENSMUST00000106653 Fam168bQ80XQ8 194 aa11.21□□□□□ -0.62
Usp47-201ENSMUST00000106653 PcntP48725 2898 aa11.19□□□□□ -0.62
Usp47-201ENSMUST00000106653 Defb50Q6TU36 73 aa11.19□□□□□ -0.62
Usp47-201ENSMUST00000106653 Dnah12Q3V0Q1 3086 aa11.18□□□□□ -0.62
Usp47-201ENSMUST00000106653 Gm27235Q3UW50 83 aa11.18□□□□□ -0.62
Usp47-201ENSMUST00000106653 Gm3233E9Q2H5 230 aa11.18□□□□□ -0.62
Usp47-201ENSMUST00000106653 Gm10160F6Y577 67 aa11.17□□□□□ -0.62
Usp47-201ENSMUST00000106653 Sprr4Q8CGN8 76 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms