RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Gm28539A0A087WSL9 92 aa15.52■□□□□ 0.08
Upf3a-201ENSMUST00000043767 Igkv3-9A0A140T8P4 119 aa15.52■□□□□ 0.08
Upf3a-201ENSMUST00000043767 1700011M02RikB1AX35 88 aa15.52■□□□□ 0.08
Upf3a-201ENSMUST00000043767 MalO09198 153 aa15.52■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Defa2P28309 93 aa15.52■□□□□ 0.07
Upf3a-201ENSMUST00000043767 PemtQ61907 199 aa15.52■□□□□ 0.07
Upf3a-201ENSMUST00000043767 TeppQ6IMH0 216 aa15.52■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Dync2h1Q45VK7 4306 aa15.51■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Stab2Q8R4U0 2559 aa15.5■□□□□ 0.07
Upf3a-201ENSMUST00000043767 PrkdcP97313 4128 aa15.5■□□□□ 0.07
Upf3a-201ENSMUST00000043767 SelenowP63300 88 aa15.5■□□□□ 0.07
Upf3a-201ENSMUST00000043767 FasnP19096 2504 aaKnown RBP15.49■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Gm10735Q3US96 136 aa15.47■□□□□ 0.07
Upf3a-201ENSMUST00000043767 2010109I03RikQ9CQ11 111 aa15.47■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Igkv6-13A0A0G2JGY3 119 aa15.47■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Reg3bP35230 175 aa15.47■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Rpl28P41105 137 aaKnown RBP15.47■□□□□ 0.07
Upf3a-201ENSMUST00000043767 Trav13-4-dv7A0A075B6C2 110 aa15.45■□□□□ 0.06
Upf3a-201ENSMUST00000043767 E130208F15RikQ3UPV3 143 aa15.45■□□□□ 0.06
Upf3a-201ENSMUST00000043767 AW011738F6S7Q2 159 aa15.44■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Acyp1P56376 99 aa15.44■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Igkv3-1A0A075B5P1 119 aa15.43■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Trav13d-4A0A0G2JFX3 110 aa15.42■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Gm867A0A1W2P7T4 151 aa15.42■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Ighv2-9-1A0A075B697 116 aa15.41■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Trav9d-4A0A0G2JG37 103 aa15.41■□□□□ 0.06
Upf3a-201ENSMUST00000043767 EnhoQ8K1D8 76 aa15.41■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Bles03Q8VD62 251 aa15.41■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Zfand2aQ9JII7 171 aa15.41■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Trav11A0A0B4J1J9 114 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 5730596B20RikQ8BQ08 205 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Ss18l2Q9D174 77 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Trav14d-3-dv8A0A075B619 120 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Krtap11-1E9Q2E9 183 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Pglyrp4Q0VB07 374 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Defb50Q6TU36 73 aa15.4■□□□□ 0.06
Upf3a-201ENSMUST00000043767 Xcl1P47993 114 aa15.39■□□□□ 0.05
Upf3a-201ENSMUST00000043767 Tmem223Q9CQE2 199 aaKnown RBP15.39■□□□□ 0.05
Upf3a-201ENSMUST00000043767 4930524J08RikQ9CUJ5 163 aa15.36■□□□□ 0.05
Upf3a-201ENSMUST00000043767 SmcpP15265 143 aa15.36■□□□□ 0.05
Upf3a-201ENSMUST00000043767 4930544G11RikQ9CR99 193 aa15.36■□□□□ 0.05
Upf3a-201ENSMUST00000043767 Trav9n-4A0A075B631 113 aa15.34■□□□□ 0.05
Upf3a-201ENSMUST00000043767 BB014433Q8C5R5 389 aa15.34■□□□□ 0.05
Upf3a-201ENSMUST00000043767 Ndufa12Q7TMF3 145 aaKnown RBP15.34■□□□□ 0.05
Upf3a-201ENSMUST00000043767 Fras1Q80T14 4010 aa15.33■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Gm9507D3Z5T3 223 aa15.33■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Sprr1bQ62267 153 aa15.33■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Ighv13-2A0A0A6YWN3 119 aa15.32■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Gm16381A0A1Y7VKT9 73 aa15.32■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Igkv1-117A0A140T8M0 119 aa15.32■□□□□ 0.04
Upf3a-201ENSMUST00000043767 2310061N02RikQ9D6S9 174 aa15.31■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Ighv1-56A0A0A6YXG2 117 aa15.29■□□□□ 0.04
Upf3a-201ENSMUST00000043767 PkigO70139 76 aa15.29■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Trav3-4A0A075B654 114 aa15.29■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Gm11213A0A1B0GR83 88 aa15.29■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Smim20D3Z7Q2 69 aa15.28■□□□□ 0.04
Upf3a-201ENSMUST00000043767 P01755 137 aa15.28■□□□□ 0.04
Upf3a-201ENSMUST00000043767 Pfn2Q9JJV2 140 aa15.27■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Apoc4Q61268 124 aa15.26■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Scgb1b2O35176 93 aa15.26■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Gm9918Q8BUR5 174 aa15.26■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Prss58Q8BW11 241 aa15.26■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Gm17509Q9CZ61 145 aa15.25■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Smim26Q3V460 107 aa15.24■□□□□ 0.03
Upf3a-201ENSMUST00000043767 PlecQ9QXS1 4691 aaKnown RBP15.23■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Igkv1-35A0A0G2JDE5 120 aa15.22■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Tcl1b3P56842 122 aa15.21■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Defb29Q8BGW9 78 aa15.21■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Mzt1Q8BUR9 78 aa15.21■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Gm16485Q8C4B7 115 aa15.21■□□□□ 0.03
Upf3a-201ENSMUST00000043767 Defa1P11477 93 aa15.2■□□□□ 0.02
Upf3a-201ENSMUST00000043767 Dnal4Q9DCM4 105 aa15.2■□□□□ 0.02
Upf3a-201ENSMUST00000043767 B230359F08RikA0A0B4J1K3 109 aa15.19■□□□□ 0.02
Upf3a-201ENSMUST00000043767 4930519P11RikQ9CUJ8 166 aa15.19■□□□□ 0.02
Upf3a-201ENSMUST00000043767 Hist1h4aP62806 103 aaKnown RBP15.18■□□□□ 0.02
Upf3a-201ENSMUST00000043767 Ntn5Q3UQ22 452 aa15.16■□□□□ 0.02
Upf3a-201ENSMUST00000043767 Igf1P05017 153 aa15.15■□□□□ 0.02
Upf3a-201ENSMUST00000043767 Defa25Q5G864 92 aa15.13■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Gm5142Q8C5X9 133 aa15.13■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Hbb-b2P02089 147 aa15.13■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Defa16P50714 93 aa15.13■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Ifitm6A0A1B0GS75 124 aa15.12■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Tmem86bQ497J1 226 aa15.1■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Csdc2Q91YQ3 154 aa15.1■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Igkv8-24A0A140T8P5 121 aa15.09■□□□□ 0.01
Upf3a-201ENSMUST00000043767 Dnah7aE9Q0T8 4024 aa15.08■□□□□ 0
Upf3a-201ENSMUST00000043767 Dnah11E9Q7N9 4488 aa15.08■□□□□ 0
Upf3a-201ENSMUST00000043767 Igkv8-18A0A0B4J1J3 123 aa15.08■□□□□ 0
Upf3a-201ENSMUST00000043767 Gm5153P01627 120 aa15.08■□□□□ 0
Upf3a-201ENSMUST00000043767 C530025M09RikF6RGA8 229 aa15.07■□□□□ 0
Upf3a-201ENSMUST00000043767 Gm10845Q3UNY9 185 aa15.07■□□□□ 0
Upf3a-201ENSMUST00000043767 Gm5617Q91VN2 117 aa15.07■□□□□ 0
Upf3a-201ENSMUST00000043767 Trav13n-2A0A0G2JF93 110 aa15.06■□□□□ 0
Upf3a-201ENSMUST00000043767 P01819 144 aa15.06■□□□□ 0
Upf3a-201ENSMUST00000043767 Ighv2-9A0A075B5Q5 116 aa15.05■□□□□ 0
Upf3a-201ENSMUST00000043767 Rpl18aP62717 176 aaKnown RBP15.05■□□□□ -0
Upf3a-201ENSMUST00000043767 Rpl39lQ9CQD0 51 aa15.05■□□□□ -0
Upf3a-201ENSMUST00000043767 Ly6g6cQ9Z1Q4 126 aa15.04■□□□□ -0
Upf3a-201ENSMUST00000043767 4930556J24RikQ9D4U7 146 aa15.02■□□□□ -0
Upf3a-201ENSMUST00000043767 Tcl1b5P56845 121 aa15.02□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 95.5 ms