RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Igkv4-61A0A0G2JH00 117 aa6.87□□□□□ -1.31
Trim9-201ENSMUST00000110520 Crip2Q9DCT8 208 aaKnown RBP6.87□□□□□ -1.31
Trim9-201ENSMUST00000110520 A0A286YCN5 57 aa6.87□□□□□ -1.31
Trim9-201ENSMUST00000110520 P01755 137 aa6.87□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ube2d1P61080 147 aaKnown RBP6.87□□□□□ -1.31
Trim9-201ENSMUST00000110520 Igkv3-2A0A075B5P0 119 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ighv8-5A0A0A6YY60 119 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Shisa2Q8QZV2 295 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 1700010B08RikQ9DAI7 102 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Znf580Q9DB38 172 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Igkv2-109A0A075B5K6 120 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ighv8-12A0A0G2JDE1 119 aa6.86□□□□□ -1.31
Trim9-201ENSMUST00000110520 Fxyd5P97808 178 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Smrp1Q2MH31 260 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Krtap27-1E9PX37 202 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 HrnrQ8VHD8 2496 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Gm17472A0A075B683 117 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Bri3P28662 125 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ppp1r32Q148A4 427 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 BC025920Q3US60 128 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Defa25Q5G864 92 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ss18l2Q9D174 77 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Wfdc12Q9JHY3 85 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Cryba4Q9JJV0 196 aa6.85□□□□□ -1.31
Trim9-201ENSMUST00000110520 Igkv1-88A0A140T8N1 120 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Gm10647E9Q8X0 124 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Gm10251J3QPM5 127 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Lamtor3O88653 124 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 MifP34884 115 aaKnown RBP6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ube2d3P61079 147 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Ube2d2P62838 147 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Cdc42se2Q8BGH7 84 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Trav9n-4A0A075B631 113 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Pglyrp4Q0VB07 374 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 CdsnQ7TPC1 561 aa6.84□□□□□ -1.31
Trim9-201ENSMUST00000110520 Gm10135F6TEE5 83 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 Spry2Q9QXV8 315 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 Pkd1l1Q8R526 2615 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 1700011M02RikB1AX35 88 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 Reg3bP35230 175 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 CrygfQ9CXV3 174 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 Trav4d-3A0A075B625 110 aa6.83□□□□□ -1.32
Trim9-201ENSMUST00000110520 Igkv4-72A0A0B4J1I4 117 aa6.82□□□□□ -1.32
Trim9-201ENSMUST00000110520 Klk11Q9QYN3 276 aa6.82□□□□□ -1.32
Trim9-201ENSMUST00000110520 Defa28D3Z1V9 94 aa6.82□□□□□ -1.32
Trim9-201ENSMUST00000110520 Ighv1-5A0A0A6YWG2 117 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Xcl1P47993 114 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Foxc1Q61572 553 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Helz2E9QAM5 2947 aaKnown RBP6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Igkv1-122A0A140T8M9 119 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 4930432M17RikQ3V0W9 174 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Cd99Q8VCN6 175 aa6.81□□□□□ -1.32
Trim9-201ENSMUST00000110520 Trav4-3A0A0B4J1K1 110 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 Igkv4-54A0A0G2JES9 117 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 PkigO70139 76 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 Gm9747Q810H1 104 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 Tfpi2O35536 230 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 9430069I07RikQ9CX21 111 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 3110070M22RikQ9DAQ7 118 aa6.8□□□□□ -1.32
Trim9-201ENSMUST00000110520 Rpl18aP62717 176 aaKnown RBP6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 4930535I16RikQ9CUI2 172 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 Wdr38Q9D994 303 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 Plac8l1Q08EJ0 177 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 D730001G18RikA0A087WQU7 115 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 Smim26Q3V460 107 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 Defb45Q3V490 66 aa6.79□□□□□ -1.32
Trim9-201ENSMUST00000110520 Ighv1-59A0A0A6YXE0 117 aa6.78□□□□□ -1.32
Trim9-201ENSMUST00000110520 Eif4ebp1Q60876 117 aa6.78□□□□□ -1.32
Trim9-201ENSMUST00000110520 Defa23Q5G866 93 aa6.78□□□□□ -1.32
Trim9-201ENSMUST00000110520 NpwA0A1L1STR8 176 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Gm20726G3UX18 150 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Igsf10Q3V1M1 2594 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Trav14d-3-dv8A0A075B619 120 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 AI854703Q8BIN3 203 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Chchd7Q8K2Q5 85 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Ufsp1Q9CZP0 217 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Trbv13-2A0A140T8N6 113 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 P06329 120 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Defa21Q8C1P2 93 aa6.77□□□□□ -1.33
Trim9-201ENSMUST00000110520 Tenm3Q9WTS6 2715 aa6.76□□□□□ -1.33
Trim9-201ENSMUST00000110520 Rpl39lQ9CQD0 51 aa6.76□□□□□ -1.33
Trim9-201ENSMUST00000110520 Krtap26-1Q9D7N2 215 aa6.76□□□□□ -1.33
Trim9-201ENSMUST00000110520 Camk2n2Q78WH7 79 aa6.76□□□□□ -1.33
Trim9-201ENSMUST00000110520 Timm17bQ9Z0V7 172 aa6.76□□□□□ -1.33
Trim9-201ENSMUST00000110520 Csmd2V9GX34 3611 aa6.75□□□□□ -1.33
Trim9-201ENSMUST00000110520 Krtap24-1G3X9A2 248 aa6.75□□□□□ -1.33
Trim9-201ENSMUST00000110520 Tmem223Q9CQE2 199 aaKnown RBP6.75□□□□□ -1.33
Trim9-201ENSMUST00000110520 A0A286YE02 88 aa6.74□□□□□ -1.33
Trim9-201ENSMUST00000110520 Gm9887F6RFI0 207 aa6.74□□□□□ -1.33
Trim9-201ENSMUST00000110520 CrygdP04342 174 aa6.74□□□□□ -1.33
Trim9-201ENSMUST00000110520 CrygeQ03740 174 aa6.74□□□□□ -1.33
Trim9-201ENSMUST00000110520 Ighv1-61P01749 117 aa6.74□□□□□ -1.33
Trim9-201ENSMUST00000110520 4930546C10RikE9Q4Y3 121 aa6.73□□□□□ -1.33
Trim9-201ENSMUST00000110520 BB014433Q8C5R5 389 aa6.73□□□□□ -1.33
Trim9-201ENSMUST00000110520 ScxQ64124 207 aa6.73□□□□□ -1.33
Trim9-201ENSMUST00000110520 5730596B20RikQ8BQ08 205 aa6.73□□□□□ -1.33
Trim9-201ENSMUST00000110520 Gpha2Q925Q5 128 aa6.73□□□□□ -1.33
Trim9-201ENSMUST00000110520 Ighv8-11A0A075B5X4 119 aa6.72□□□□□ -1.33
Trim9-201ENSMUST00000110520 Sostdc1Q9CQN4 206 aa6.72□□□□□ -1.33
Trim9-201ENSMUST00000110520 Igkv4-58A0A0G2JGI6 119 aa6.72□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 110.6 ms