RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Atp5g1Q9CR84 136 aa10.81□□□□□ -0.68
Vcan-201ENSMUST00000109543 Gm10577Q3UDV9 132 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Lst1O08843 95 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Cmc4Q61908 68 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Defb50Q6TU36 73 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Phpt1Q9DAK9 124 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Cdip1Q9DB75 208 aa10.8□□□□□ -0.68
Vcan-201ENSMUST00000109543 Zfp951A0A087WRH0 451 aa10.79□□□□□ -0.68
Vcan-201ENSMUST00000109543 P01755 137 aa10.79□□□□□ -0.68
Vcan-201ENSMUST00000109543 Ss18l2Q9D174 77 aa10.79□□□□□ -0.68
Vcan-201ENSMUST00000109543 Igkv1-99F6XWB2 120 aa10.78□□□□□ -0.68
Vcan-201ENSMUST00000109543 Atp5g3P56384 141 aa10.78□□□□□ -0.68
Vcan-201ENSMUST00000109543 Cox6cQ9CPQ1 76 aa10.78□□□□□ -0.68
Vcan-201ENSMUST00000109543 Dad1P61804 113 aa10.78□□□□□ -0.68
Vcan-201ENSMUST00000109543 Bles03Q8VD62 251 aa10.78□□□□□ -0.68
Vcan-201ENSMUST00000109543 Hivep3A2A884 2348 aa10.77□□□□□ -0.69
Vcan-201ENSMUST00000109543 Trav7-6A0A075B640 112 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 B230359F08RikA0A0B4J1K3 109 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 MalO09198 153 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 Pfn2Q9JJV2 140 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 Trbv13-2A0A140T8N6 113 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 Prh1P05142 261 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 SelenowP63300 88 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 SpinklQ8CEK3 90 aa10.76□□□□□ -0.69
Vcan-201ENSMUST00000109543 Gm10647E9Q8X0 124 aa10.75□□□□□ -0.69
Vcan-201ENSMUST00000109543 Higd2aQ9CQJ1 106 aa10.75□□□□□ -0.69
Vcan-201ENSMUST00000109543 Znf740Q6NZQ6 180 aa10.75□□□□□ -0.69
Vcan-201ENSMUST00000109543 Tmem223Q9CQE2 199 aaKnown RBP10.75□□□□□ -0.69
Vcan-201ENSMUST00000109543 Lage3Q9CR70 148 aa10.75□□□□□ -0.69
Vcan-201ENSMUST00000109543 Igkv6-13A0A0G2JGY3 119 aa10.74□□□□□ -0.69
Vcan-201ENSMUST00000109543 Klk9Q32M27 251 aa10.74□□□□□ -0.69
Vcan-201ENSMUST00000109543 Foxc1Q61572 553 aa10.74□□□□□ -0.69
Vcan-201ENSMUST00000109543 Ube2wQ8VDW4 151 aa10.73□□□□□ -0.69
Vcan-201ENSMUST00000109543 Psors1c2Q80ZC9 134 aa10.72□□□□□ -0.69
Vcan-201ENSMUST00000109543 Nbeal2Q6ZQA0 2742 aa10.72□□□□□ -0.69
Vcan-201ENSMUST00000109543 PemtQ61907 199 aa10.72□□□□□ -0.69
Vcan-201ENSMUST00000109543 Sprr1bQ62267 153 aa10.72□□□□□ -0.69
Vcan-201ENSMUST00000109543 Gm10767Q3TQP0 103 aa10.71□□□□□ -0.69
Vcan-201ENSMUST00000109543 Gm10549Q3URY4 149 aa10.71□□□□□ -0.69
Vcan-201ENSMUST00000109543 Tex15F8VPN2 2785 aa10.71□□□□□ -0.7
Vcan-201ENSMUST00000109543 Ndufa12Q7TMF3 145 aaKnown RBP10.7□□□□□ -0.7
Vcan-201ENSMUST00000109543 Prss58Q8BW11 241 aa10.7□□□□□ -0.7
Vcan-201ENSMUST00000109543 Tenm1Q9WTS4 2731 aa10.69□□□□□ -0.7
Vcan-201ENSMUST00000109543 Igkv3-9A0A140T8P4 119 aa10.69□□□□□ -0.7
Vcan-201ENSMUST00000109543 Itpr2Q9Z329 2701 aa10.69□□□□□ -0.7
Vcan-201ENSMUST00000109543 Igkv1-117A0A140T8M0 119 aa10.69□□□□□ -0.7
Vcan-201ENSMUST00000109543 Trav9n-4A0A075B631 113 aa10.68□□□□□ -0.7
Vcan-201ENSMUST00000109543 Cryba4Q9JJV0 196 aa10.68□□□□□ -0.7
Vcan-201ENSMUST00000109543 Ighv2-9-1A0A075B697 116 aa10.67□□□□□ -0.7
Vcan-201ENSMUST00000109543 Klk11Q9QYN3 276 aa10.67□□□□□ -0.7
Vcan-201ENSMUST00000109543 Spry2Q9QXV8 315 aa10.66□□□□□ -0.7
Vcan-201ENSMUST00000109543 Trav13-1A0A075B644 110 aa10.65□□□□□ -0.7
Vcan-201ENSMUST00000109543 Rpl28P41105 137 aaKnown RBP10.65□□□□□ -0.7
Vcan-201ENSMUST00000109543 Cks1bP61025 79 aa10.65□□□□□ -0.7
Vcan-201ENSMUST00000109543 1700020N15RikL7MTX3 112 aa10.64□□□□□ -0.71
Vcan-201ENSMUST00000109543 Pglyrp4Q0VB07 374 aa10.64□□□□□ -0.71
Vcan-201ENSMUST00000109543 Defb29Q8BGW9 78 aa10.63□□□□□ -0.71
Vcan-201ENSMUST00000109543 Xlr5cQ9JJR2 179 aa10.63□□□□□ -0.71
Vcan-201ENSMUST00000109543 TeppQ6IMH0 216 aa10.63□□□□□ -0.71
Vcan-201ENSMUST00000109543 Wdr38Q9D994 303 aa10.63□□□□□ -0.71
Vcan-201ENSMUST00000109543 Mzt1Q8BUR9 78 aa10.62□□□□□ -0.71
Vcan-201ENSMUST00000109543 Gm7138L7N2C3 230 aa10.61□□□□□ -0.71
Vcan-201ENSMUST00000109543 Tmem86bQ497J1 226 aa10.61□□□□□ -0.71
Vcan-201ENSMUST00000109543 Gm3238W4VSP7 230 aa10.61□□□□□ -0.71
Vcan-201ENSMUST00000109543 Ighv8-13A0A075B5Y0 101 aa10.61□□□□□ -0.71
Vcan-201ENSMUST00000109543 Spata45Q9CVW4 97 aa10.61□□□□□ -0.71
Vcan-201ENSMUST00000109543 Igkv1-35A0A0G2JDE5 120 aa10.6□□□□□ -0.71
Vcan-201ENSMUST00000109543 Krtap11-1E9Q2E9 183 aa10.6□□□□□ -0.71
Vcan-201ENSMUST00000109543 C530025M09RikF6RGA8 229 aa10.6□□□□□ -0.71
Vcan-201ENSMUST00000109543 E130114P18RikF6S0S7 154 aa10.6□□□□□ -0.71
Vcan-201ENSMUST00000109543 AtrQ9JKK8 2635 aa10.6□□□□□ -0.71
Vcan-201ENSMUST00000109543 Ighv8-11A0A075B5X4 119 aa10.59□□□□□ -0.71
Vcan-201ENSMUST00000109543 2010109I03RikQ9CQ11 111 aa10.59□□□□□ -0.71
Vcan-201ENSMUST00000109543 Lyrm7Q9DA03 104 aa10.59□□□□□ -0.71
Vcan-201ENSMUST00000109543 Trav13-2A0A075B649 110 aa10.58□□□□□ -0.72
Vcan-201ENSMUST00000109543 4930524J08RikQ9CUJ5 163 aa10.57□□□□□ -0.72
Vcan-201ENSMUST00000109543 Gm16381A0A1Y7VKT9 73 aa10.57□□□□□ -0.72
Vcan-201ENSMUST00000109543 Phxr5P08399 672 aa10.57□□□□□ -0.72
Vcan-201ENSMUST00000109543 PolqQ8CGS6 2544 aa10.56□□□□□ -0.72
Vcan-201ENSMUST00000109543 Igkv3-1A0A075B5P1 119 aa10.56□□□□□ -0.72
Vcan-201ENSMUST00000109543 Trav13n-2A0A0G2JF93 110 aa10.56□□□□□ -0.72
Vcan-201ENSMUST00000109543 Anapc13Q8R034 74 aa10.56□□□□□ -0.72
Vcan-201ENSMUST00000109543 Dnal4Q9DCM4 105 aa10.56□□□□□ -0.72
Vcan-201ENSMUST00000109543 Notch2O35516 2470 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 Ighv1-56A0A0A6YXG2 117 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 Igkv8-24A0A140T8P5 121 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 MifP34884 115 aaKnown RBP10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 5730596B20RikQ8BQ08 205 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 Gm867A0A1W2P7T4 151 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 EnhoQ8K1D8 76 aa10.55□□□□□ -0.72
Vcan-201ENSMUST00000109543 Igkv8-18A0A0B4J1J3 123 aa10.53□□□□□ -0.72
Vcan-201ENSMUST00000109543 P01896 185 aa10.53□□□□□ -0.72
Vcan-201ENSMUST00000109543 Smim26Q3V460 107 aa10.53□□□□□ -0.72
Vcan-201ENSMUST00000109543 Gm5142Q8C5X9 133 aa10.53□□□□□ -0.72
Vcan-201ENSMUST00000109543 Stab1Q8R4Y4 2571 aa10.52□□□□□ -0.72
Vcan-201ENSMUST00000109543 Gm5153P01627 120 aa10.52□□□□□ -0.72
Vcan-201ENSMUST00000109543 Snhg11Q4G0K9 87 aa10.52□□□□□ -0.72
Vcan-201ENSMUST00000109543 Igkv8-34A0A0G2JDU0 121 aa10.52□□□□□ -0.73
Vcan-201ENSMUST00000109543 Tcl1b3P56842 122 aa10.52□□□□□ -0.73
Vcan-201ENSMUST00000109543 Igkv8-16A0A0G2JDG9 121 aa10.51□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms