RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Fgf23Q9EPC2 251 aa5.95□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Ly6hQ9WUC3 139 aa5.95□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Ube2d4D3YUH6 135 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 AngP21570 145 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 SelenowP63300 88 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Cd99Q8VCN6 175 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 OtoglF7A4A7 2325 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Wnk1P83741 2377 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Igkv4-78A0A0A6YYE5 119 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Pla2g2cP48076 150 aa5.94□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Ubr5Q80TP3 2792 aa5.93□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Gm9195A0A140LHT4 2805 aa5.93□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Igkv4-68A0A0B4J1I7 117 aa5.93□□□□□ -1.46
Cdc40-201ENSMUST00000044166 P01823 113 aa5.93□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Ufsp1Q9CZP0 217 aa5.93□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Trav13-2A0A075B649 110 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Gm17472A0A075B683 117 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Lce6aD3YV94 81 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Igkv1-35A0A0G2JDE5 120 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 CnbpP53996 178 aaKnown RBP5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Lst1O08843 95 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Csmd2V9GX34 3611 aa5.92□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Trav13n-1A0A0G2JEU8 110 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Znf414Q9DCK4 299 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Gm10542F6XDR3 90 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 A930009A15RikG3UYI6 118 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 GfyJ3KML8 504 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 4930519P11RikQ9CUJ8 166 aa5.91□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Sox16Q62247 57 aa5.9□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Sostdc1Q9CQN4 206 aa5.9□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Usp24B1AY13 2617 aaKnown RBP5.9□□□□□ -1.46
Cdc40-201ENSMUST00000044166 Ighv1-62-1A0A075B5U3 116 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm10577Q3UDV9 132 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Defb12Q8K4N3 78 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm37988J3QM41 62 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Reg3gO09049 174 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm815Q3UWS2 115 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Lrrk2Q5S006 2527 aa5.9□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm9513B3GLJ6 99 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Tmem254aP0DN89 123 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Tmem254bP0DN90 123 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Tmem254cP0DN91 123 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 A930002H24RikQ8C8Y3 163 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Lage3Q9CR70 148 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 LrbaQ9ESE1 2856 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Trav9n-2A0A0G2JDP3 113 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Fam104aA2A6P4 185 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 4930546C10RikE9Q4Y3 121 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 P01738 130 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Ppp1r32Q148A4 427 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Defb29Q8BGW9 78 aa5.89□□□□□ -1.47
Cdc40-201ENSMUST00000044166 P01786 117 aa5.88□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Igkv4-79A0A075B5L8 119 aa5.88□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Trbv13-2A0A140T8N6 113 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 1700011M02RikB1AX35 88 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 4930470P17RikQ9D542 155 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Pkd1l2Q7TN88 2461 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Acyp1P56376 99 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm10549Q3URY4 149 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Notch2O35516 2470 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Abca2P41234 2434 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm10197F6QEY5 67 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 E130114P18RikF6S0S7 154 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Rpl36aP83882 106 aaKnown RBP5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Fam19a3Q7TPG6 132 aa5.87□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Lamtor3O88653 124 aa5.86□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Q99M08 65 aa5.86□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Trav13-4-dv7A0A075B6C2 110 aa5.86□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Trav13d-4A0A0G2JFX3 110 aa5.86□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Trav9d-4A0A0G2JG37 103 aa5.86□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Igkv3-10A0A0G2JGN0 119 aa5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 4930524J08RikQ9CUJ5 163 aa5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 AcacbE9Q4Z2 2448 aa5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm9925F6T2U3 160 aa5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Cdc42se2Q8BGH7 84 aa5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Hectd1Q69ZR2 2618 aaKnown RBP5.85□□□□□ -1.47
Cdc40-201ENSMUST00000044166 NbasE9Q411 2356 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Igkv4-53A0A0G2JFC6 119 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm16381A0A1Y7VKT9 73 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Spink1P09036 80 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Cox6b1P56391 86 aaKnown RBP5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Vmo1Q5SXG7 201 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Ndufa12Q7TMF3 145 aaKnown RBP5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 Gm10570F6VB42 170 aa5.84□□□□□ -1.47
Cdc40-201ENSMUST00000044166 C530025M09RikF6RGA8 229 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Tfpi2O35536 230 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Plac8l1Q08EJ0 177 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Lelp1Q9DAE3 120 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Gcn1E9PVA8 2671 aaKnown RBP5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Gm10160F6Y577 67 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 P01745 121 aa5.83□□□□□ -1.48
Cdc40-201ENSMUST00000044166 1700042G07RikB1AUF7 90 aa5.82□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Nav3Q80TN7 2359 aa5.82□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Bahcc1Q3UHR0 2643 aa5.82□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Gm7075D3Z497 112 aa5.82□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Gm10647E9Q8X0 124 aa5.82□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Igkv1-117A0A140T8M0 119 aa5.81□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Ighv2-9-1A0A075B697 116 aa5.79□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Gm3443F7CCV5 94 aa5.79□□□□□ -1.48
Cdc40-201ENSMUST00000044166 Reg3aO09037 175 aa5.79□□□□□ -1.48
Retrieved 100 of 22,080 RNA–protein pairs in 50.3 ms