RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Bahcc1Q3UHR0 2643 aa13.38□□□□□ -0.27
Ebf3-201ENSMUST00000033378 ColqO35348 457 aa13.37□□□□□ -0.27
Ebf3-201ENSMUST00000033378 TeppQ6IMH0 216 aa13.37□□□□□ -0.27
Ebf3-201ENSMUST00000033378 9530003J23RikQ8BM26 151 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Pou2af1Q64693 256 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 A930009A15RikG3UYI6 118 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Rpl28P41105 137 aaKnown RBP13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 BC025920Q3US60 128 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 A830005F24RikQ8BRT5 167 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Gm9922Q8C3P1 144 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Ube2aQ9Z255 152 aa13.36□□□□□ -0.27
Ebf3-201ENSMUST00000033378 MtorQ9JLN9 2549 aa13.35□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Igkv3-5A0A140T8M6 119 aa13.34□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Prr9Q8BV84 116 aa13.34□□□□□ -0.27
Ebf3-201ENSMUST00000033378 Pla2g1bQ9Z0Y2 146 aa13.33□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Fam19a1Q7TPG8 133 aa13.33□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Col4a4Q9QZR9 1682 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Plac8l1Q08EJ0 177 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Shisa2Q8QZV2 295 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 1700012A03RikQ9DAF1 130 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 SvipQ3UZP4 77 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Trbv13-2A0A140T8N6 113 aa13.32□□□□□ -0.28
Ebf3-201ENSMUST00000033378 A830031A19RikQ8BNT5 113 aa13.31□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Gm5142Q8C5X9 133 aa13.31□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Cox7bP56393 80 aa13.31□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Igkv3-10A0A0G2JGN0 119 aa13.29□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Igkv4-92A0A0B4J1I2 117 aa13.29□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Gm19935A0A1B0GSF9 52 aa13.29□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Gm10845Q3UNY9 185 aa13.29□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Cep350E9Q309 3095 aa13.29□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Gm3443F7CCV5 94 aa13.28□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Defb45Q3V490 66 aa13.28□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Defb40Q70KL2 73 aa13.28□□□□□ -0.28
Ebf3-201ENSMUST00000033378 TrrapQ80YV3 2565 aaKnown RBP13.27□□□□□ -0.28
Ebf3-201ENSMUST00000033378 Gm10549Q3URY4 149 aa13.25□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Psmb11Q8BG41 302 aa13.25□□□□□ -0.29
Ebf3-201ENSMUST00000033378 3110070M22RikQ9DAQ7 118 aa13.25□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Col27a1Q5QNQ9 1845 aa13.25□□□□□ -0.29
Ebf3-201ENSMUST00000033378 SptssbQ925E8 76 aa13.25□□□□□ -0.29
Ebf3-201ENSMUST00000033378 BaalcQ8VHV1 145 aa13.24□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Atox1O08997 68 aaKnown RBP13.23□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Dnah12Q3V0Q1 3086 aa13.22□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Igkv1-110A0A0B4J1I0 119 aa13.22□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Igkv1-117A0A140T8M0 119 aa13.22□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Gm11011D3Z3L9 86 aa13.22□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Gpha2Q925Q5 128 aa13.22□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Fam19a5Q91WE9 132 aa13.21□□□□□ -0.29
Ebf3-201ENSMUST00000033378 4930556J24RikQ9D4U7 146 aa13.21□□□□□ -0.29
Ebf3-201ENSMUST00000033378 Obox2E9PXV9 151 aa13.2□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Zfp462B1AWL2 2495 aaKnown RBP13.2□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Gm3285A0A1W2P7U0 201 aa13.2□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Sox16Q62247 57 aa13.19□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Ighv2-9-1A0A075B697 116 aa13.19□□□□□ -0.3
Ebf3-201ENSMUST00000033378 TrioQ0KL02 3102 aa13.19□□□□□ -0.3
Ebf3-201ENSMUST00000033378 CenpfE9Q3P4 2997 aaKnown RBP13.17□□□□□ -0.3
Ebf3-201ENSMUST00000033378 E130114P18RikF6S0S7 154 aa13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Gm10337F7DEP7 55 aa13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Hcfc1Q61191 2045 aaKnown RBP13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Ighv10-3A0A075B5T6 119 aa13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Tcl1b5P56845 121 aa13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 SbsponQ3UPR9 264 aa13.16□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Cd164l2Q9D6W7 172 aa13.15□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Trav14-1A0A0G2JF94 121 aa13.15□□□□□ -0.3
Ebf3-201ENSMUST00000033378 CrygfQ9CXV3 174 aa13.15□□□□□ -0.3
Ebf3-201ENSMUST00000033378 Zfand2aQ9JII7 171 aa13.14□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Myo18bE9PV66 2605 aa13.13□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Ifitm6A0A1B0GS75 124 aa13.13□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Gm9767G3X930 207 aa13.13□□□□□ -0.31
Ebf3-201ENSMUST00000033378 H2al1bA0A087WP11 105 aa13.13□□□□□ -0.31
Ebf3-201ENSMUST00000033378 P06329 120 aa13.13□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Col5a1O88207 1838 aa13.12□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Apoc4Q61268 124 aa13.12□□□□□ -0.31
Ebf3-201ENSMUST00000033378 9230102O04RikA2ASX7 82 aa13.12□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Abca12E9Q876 2595 aa13.12□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Serp1Q9Z1W5 66 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Gm5153P01627 120 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Ndufs5Q99LY9 106 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Defb13Q8R2I4 64 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 SnurfQ9WU12 71 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Znf580Q9DB38 172 aa13.11□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Wfdc13Q5DQQ6 81 aa13.1□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Gm5464Q3UY29 175 aa13.09□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Gm10300Q8C8P7 189 aa13.09□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Wfdc15aQ8BH89 80 aa13.09□□□□□ -0.31
Ebf3-201ENSMUST00000033378 Igkv3-4A0A140T8Q4 119 aa13.08□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Sprr2jO70561 109 aa13.08□□□□□ -0.32
Ebf3-201ENSMUST00000033378 A0A286YE49 62 aa13.07□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Wfdc10Q3V2J9 124 aa13.06□□□□□ -0.32
Ebf3-201ENSMUST00000033378 D730001G18RikA0A087WQU7 115 aa13.06□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Gm9887F6RFI0 207 aa13.05□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Igkv3-3A0A140T8Q0 119 aa13.04□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Ighv1-56A0A0A6YXG2 117 aa13.04□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Sostdc1Q9CQN4 206 aa13.04□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Odf3l2Q3TZ65 277 aa13.04□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Defb2P82020 71 aa13.02□□□□□ -0.32
Ebf3-201ENSMUST00000033378 Gm20604F8WIA3 75 aa13.02□□□□□ -0.33
Ebf3-201ENSMUST00000033378 UtrnE9Q6R7 3430 aa13.02□□□□□ -0.33
Ebf3-201ENSMUST00000033378 Epg5Q80TA9 2572 aa13.01□□□□□ -0.33
Ebf3-201ENSMUST00000033378 UqcrqQ9CQ69 82 aa13.01□□□□□ -0.33
Ebf3-201ENSMUST00000033378 SycnQ8VCK7 134 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms