RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Defb45Q3V490 66 aa11.07□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Crlf1Q9JM58 425 aa11.07□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Mfap4Q9D1H9 257 aa11.07□□□□□ -0.64
Scaf4-201ENSMUST00000039280 FlnbQ80X90 2602 aaKnown RBP11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Dchs2A0A0A6YW72 3346 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Prh1P05142 261 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Ndufa12Q7TMF3 145 aaKnown RBP11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Ighv1-85A0A075B5Y6 117 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Gm10490F6VBM2 120 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 PemtQ61907 199 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Dand5Q76LW6 185 aa11.06□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Igkv4-69A0A0B4J1I6 116 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Lage3Q9CR70 148 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Igf1P05017 153 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Trav11A0A0B4J1J9 114 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Gm10542F6XDR3 90 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Tmem86bQ497J1 226 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Gm4861Q8C5A4 106 aa11.05□□□□□ -0.64
Scaf4-201ENSMUST00000039280 AngP21570 145 aa11.04□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Trav4-3A0A0B4J1K1 110 aa11.04□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Atp5g1Q9CR84 136 aa11.04□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Trav14d-3-dv8A0A075B619 120 aa11.04□□□□□ -0.64
Scaf4-201ENSMUST00000039280 NpwA0A1L1STR8 176 aa11.03□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Tmem243B2RVB9 118 aa11.03□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Sslp1Q3UN54 99 aa11.03□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Ly6c2P0CW03 131 aa11.02□□□□□ -0.64
Scaf4-201ENSMUST00000039280 Igkv3-1A0A075B5P1 119 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 4930564D02RikQ9D4S4 103 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Ighv1-11A0A0A6YWI9 117 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Prr13Q9CQJ5 137 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 FlnaQ8BTM8 2647 aaKnown RBP11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 SbsponQ3UPR9 264 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 1700010B08RikQ9DAI7 102 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Spry2Q9QXV8 315 aa11.02□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Dchs1E9PVD3 3291 aa11.01□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Sh2d1aO88890 126 aa11.01□□□□□ -0.65
Scaf4-201ENSMUST00000039280 B230307C23RikQ8BLB2 64 aa11.01□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Samd13D3YUG0 102 aa11□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Gm3443F7CCV5 94 aa11□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Smim26Q3V460 107 aa11□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Gm9767G3X930 207 aa11□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Ighv1-63A0A075B5X2 117 aa10.99□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Wfdc15aQ8BH89 80 aa10.99□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Ly6hQ9WUC3 139 aa10.99□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Adgrg4B7ZCC9 3073 aa10.99□□□□□ -0.65
Scaf4-201ENSMUST00000039280 PolqQ8CGS6 2544 aa10.98□□□□□ -0.65
Scaf4-201ENSMUST00000039280 NbeaQ9EPN1 2936 aa10.98□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Igkv3-9A0A140T8P4 119 aa10.98□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Ighv2-6-8A0A0A6YWY9 116 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Igkv8-24A0A140T8P5 121 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 PrcdQ00LT2 53 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Igkv1-35A0A0G2JDE5 120 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 B230217C12RikE9Q3Z1 139 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Timm17bQ9Z0V7 172 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Gm9195A0A140LHT4 2805 aa10.97□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Znf580Q9DB38 172 aa10.96□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Ighv1-5A0A0A6YWG2 117 aa10.96□□□□□ -0.65
Scaf4-201ENSMUST00000039280 Igkv4-62A0A0G2JDW9 117 aa10.96□□□□□ -0.65
Scaf4-201ENSMUST00000039280 MplkipQ9D011 178 aa10.96□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Srsf12Q8C8K3 266 aa10.95□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Trav13-4-dv7A0A075B6C2 110 aa10.95□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Fxyd5P97808 178 aa10.95□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Fgfbp3Q1HCM0 245 aa10.95□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Lelp1Q9DAE3 120 aa10.95□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Usp9yF8VPU6 2556 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Trav13d-4A0A0G2JFX3 110 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Mrpl55Q9CZ83 127 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Igkv8-34A0A0G2JDU0 121 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Psmb11Q8BG41 302 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 9430069I07RikQ9CX21 111 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Usp24B1AY13 2617 aaKnown RBP10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 RelnQ60841 3461 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Igkv4-53A0A0G2JFC6 119 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 BC025920Q3US60 128 aa10.94□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Ighv1-72P01751 139 aa10.93□□□□□ -0.66
Scaf4-201ENSMUST00000039280 PtprqP0C5E4 2300 aa10.93□□□□□ -0.66
Scaf4-201ENSMUST00000039280 GhrhP16043 103 aa10.93□□□□□ -0.66
Scaf4-201ENSMUST00000039280 CenpwQ3URR0 86 aa10.93□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Ubl5Q9EPV8 73 aa10.93□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Igkv4-68A0A0B4J1I7 117 aa10.92□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Defb42Q8BVB5 75 aa10.92□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Higd2aQ9CQJ1 106 aa10.92□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Igkv8-16A0A0G2JDG9 121 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Cdk2ap2Q9CPY4 127 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Gm10509O88255 85 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 P01729 129 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Acyp1P56376 99 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Muc2Q80Z19 2680 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Defa27F2Z403 93 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Gm9922Q8C3P1 144 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Defa28D3Z1V9 94 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Bri3P28662 125 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Gm10300Q8C8P7 189 aa10.91□□□□□ -0.66
Scaf4-201ENSMUST00000039280 P01823 113 aa10.9□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Ighv13-2A0A0A6YWN3 119 aa10.9□□□□□ -0.66
Scaf4-201ENSMUST00000039280 Ighv1-61P01749 117 aa10.9□□□□□ -0.67
Scaf4-201ENSMUST00000039280 4930432M17RikQ3V0W9 174 aa10.9□□□□□ -0.67
Scaf4-201ENSMUST00000039280 5730596B20RikQ8BQ08 205 aa10.89□□□□□ -0.67
Scaf4-201ENSMUST00000039280 Naa38Q9D2U5 125 aa10.89□□□□□ -0.67
Scaf4-201ENSMUST00000039280 Ppp1r32Q148A4 427 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 75.4 ms