Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gm25239-201ENSMUST00000174915 86 ntBASIC32.65■■■□□ 2.82
Crlf1Q9JM58 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Crlf1Q9JM58 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Crlf1Q9JM58 Gm24109-201ENSMUST00000175489 103 ntBASIC28.56■■■□□ 2.16
Crlf1Q9JM58 Gm15042-201ENSMUST00000120212 883 ntBASIC28.05■■■□□ 2.08
Crlf1Q9JM58 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Crlf1Q9JM58 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
Crlf1Q9JM58 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Crlf1Q9JM58 Gm15045-201ENSMUST00000117359 883 ntBASIC27.29■■□□□ 1.96
Crlf1Q9JM58 Gm23366-201ENSMUST00000175022 89 ntBASIC27.24■■□□□ 1.95
Crlf1Q9JM58 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Crlf1Q9JM58 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.81■■□□□ 1.88
Crlf1Q9JM58 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.61■■□□□ 1.85
Crlf1Q9JM58 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Crlf1Q9JM58 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Crlf1Q9JM58 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.46■■□□□ 1.83
Crlf1Q9JM58 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Crlf1Q9JM58 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Crlf1Q9JM58 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.04■■□□□ 1.76
Crlf1Q9JM58 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Crlf1Q9JM58 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Crlf1Q9JM58 Gm25238-201ENSMUST00000174914 89 ntBASIC25.92■■□□□ 1.74
Crlf1Q9JM58 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.45■■□□□ 1.66
Crlf1Q9JM58 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Crlf1Q9JM58 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Crlf1Q9JM58 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Crlf1Q9JM58 Gm25262-201ENSMUST00000174934 133 ntBASIC25.15■■□□□ 1.62
Crlf1Q9JM58 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Crlf1Q9JM58 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.09■■□□□ 1.61
Crlf1Q9JM58 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Crlf1Q9JM58 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.98■■□□□ 1.59
Crlf1Q9JM58 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Crlf1Q9JM58 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Crlf1Q9JM58 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC24.83■■□□□ 1.57
Crlf1Q9JM58 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.8■■□□□ 1.56
Crlf1Q9JM58 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.76■■□□□ 1.55
Crlf1Q9JM58 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Crlf1Q9JM58 Gm26115-201ENSMUST00000175605 87 ntBASIC24.75■■□□□ 1.55
Crlf1Q9JM58 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC24.75■■□□□ 1.55
Crlf1Q9JM58 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.68■■□□□ 1.54
Crlf1Q9JM58 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Crlf1Q9JM58 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Crlf1Q9JM58 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Crlf1Q9JM58 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Crlf1Q9JM58 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Crlf1Q9JM58 Gm8109-201ENSMUST00000194076 746 ntBASIC24.49■■□□□ 1.51
Crlf1Q9JM58 Gm27325-201ENSMUST00000175467 74 ntBASIC24.47■■□□□ 1.51
Crlf1Q9JM58 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Crlf1Q9JM58 Rab21-202ENSMUST00000218831 843 ntBASIC24.4■■□□□ 1.5
Crlf1Q9JM58 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.4■■□□□ 1.5
Crlf1Q9JM58 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.35■■□□□ 1.49
Crlf1Q9JM58 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Crlf1Q9JM58 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Crlf1Q9JM58 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Crlf1Q9JM58 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Crlf1Q9JM58 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Crlf1Q9JM58 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Crlf1Q9JM58 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.02■■□□□ 1.44
Crlf1Q9JM58 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24■■□□□ 1.43
Crlf1Q9JM58 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.99■■□□□ 1.43
Crlf1Q9JM58 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.94■■□□□ 1.42
Crlf1Q9JM58 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Crlf1Q9JM58 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Crlf1Q9JM58 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Crlf1Q9JM58 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.77■■□□□ 1.4
Crlf1Q9JM58 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Crlf1Q9JM58 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Crlf1Q9JM58 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Crlf1Q9JM58 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.68■■□□□ 1.38
Crlf1Q9JM58 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Crlf1Q9JM58 Gm24804-201ENSMUST00000174982 85 ntBASIC23.65■■□□□ 1.38
Crlf1Q9JM58 Gm17082-201ENSMUST00000166043 1091 ntBASIC23.63■■□□□ 1.37
Crlf1Q9JM58 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Crlf1Q9JM58 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Crlf1Q9JM58 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Crlf1Q9JM58 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.55■■□□□ 1.36
Crlf1Q9JM58 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Crlf1Q9JM58 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Crlf1Q9JM58 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
Crlf1Q9JM58 Gm27322-201ENSMUST00000184007 104 ntBASIC23.41■■□□□ 1.34
Crlf1Q9JM58 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Crlf1Q9JM58 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.35■■□□□ 1.33
Crlf1Q9JM58 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.32■■□□□ 1.32
Crlf1Q9JM58 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.31■■□□□ 1.32
Crlf1Q9JM58 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Crlf1Q9JM58 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.26■■□□□ 1.31
Crlf1Q9JM58 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Crlf1Q9JM58 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Crlf1Q9JM58 Zfp131-205ENSMUST00000223812 663 ntBASIC23.24■■□□□ 1.31
Crlf1Q9JM58 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Crlf1Q9JM58 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Crlf1Q9JM58 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Crlf1Q9JM58 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.2■■□□□ 1.3
Crlf1Q9JM58 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
Crlf1Q9JM58 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Crlf1Q9JM58 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Crlf1Q9JM58 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC23.17■■□□□ 1.3
Crlf1Q9JM58 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC23.15■■□□□ 1.3
Crlf1Q9JM58 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Crlf1Q9JM58 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms