RNA–Protein interactions for RNA: ENSMUST00000039280.7

Scaf4-201, Transcript of SR-related CTD-associated factor 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Scaf4, Length 4,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4-201ENSMUST00000039280 Rhox8Q6VSS7 320 aa27.39■■□□□ 1.98
Scaf4-201ENSMUST00000039280 NischQ80TM9 1593 aa26.7■■□□□ 1.87
Scaf4-201ENSMUST00000039280 Abcc9P70170 1546 aa25.38■■□□□ 1.65
Scaf4-201ENSMUST00000039280 Rpgrip1Q9EPQ2 1331 aa25.02■■□□□ 1.6
Scaf4-201ENSMUST00000039280 Ccdc136Q3TVA9 1136 aa24.96■■□□□ 1.59
Scaf4-201ENSMUST00000039280 Abcc8B2RUS7 1588 aa24.92■■□□□ 1.58
Scaf4-201ENSMUST00000039280 Gm35339A0A140LHH9 1649 aa24.7■■□□□ 1.54
Scaf4-201ENSMUST00000039280 Ehmt2Q9Z148 1263 aaKnown RBP24.47■■□□□ 1.51
Scaf4-201ENSMUST00000039280 Trim41Q5NCC3 630 aa24.23■■□□□ 1.47
Scaf4-201ENSMUST00000039280 Cngb1E1AZ71 1325 aa24.17■■□□□ 1.46
Scaf4-201ENSMUST00000039280 Ccdc180J3QNE4 1664 aa24.08■■□□□ 1.45
Scaf4-201ENSMUST00000039280 Esf1Q3V1V3 845 aaKnown RBP24.07■■□□□ 1.44
Scaf4-201ENSMUST00000039280 Rtl1Q7M732 1744 aa24.06■■□□□ 1.44
Scaf4-201ENSMUST00000039280 Gab3Q8BSM5 595 aa23.92■■□□□ 1.42
Scaf4-201ENSMUST00000039280 Acin1Q9JIX8 1338 aaKnown RBP23.87■■□□□ 1.41
Scaf4-201ENSMUST00000039280 Zcchc6Q5BLK4 1491 aaKnown RBP23.81■■□□□ 1.4
Scaf4-201ENSMUST00000039280 HrcG5E8J6 738 aa23.71■■□□□ 1.39
Scaf4-201ENSMUST00000039280 Pcgf6Q99NA9 353 aa23.42■■□□□ 1.34
Scaf4-201ENSMUST00000039280 Rb1cc1Q9ESK9 1588 aa23.41■■□□□ 1.34
Scaf4-201ENSMUST00000039280 Las1lA2BE28 776 aaKnown RBP23.31■■□□□ 1.32
Scaf4-201ENSMUST00000039280 Npm2Q80W85 207 aa23.29■■□□□ 1.32
Scaf4-201ENSMUST00000039280 Myt1lP97500 1187 aa23.29■■□□□ 1.32
Scaf4-201ENSMUST00000039280 Dcaf1Q80TR8 1506 aa23.11■■□□□ 1.29
Scaf4-201ENSMUST00000039280 NacadQ5SWP3 1504 aa23.1■■□□□ 1.29
Scaf4-201ENSMUST00000039280 Zeb1Q64318 1117 aa23.09■■□□□ 1.29
Scaf4-201ENSMUST00000039280 Kdm5dQ62240 1548 aa22.98■■□□□ 1.27
Scaf4-201ENSMUST00000039280 Baz1aO88379 1555 aa22.98■■□□□ 1.27
Scaf4-201ENSMUST00000039280 UbtfP25976 765 aaKnown RBP22.9■■□□□ 1.26
Scaf4-201ENSMUST00000039280 Il27Q8K3I6 234 aa22.9■■□□□ 1.26
Scaf4-201ENSMUST00000039280 Supt5hO55201 1082 aaKnown RBP22.84■■□□□ 1.25
Scaf4-201ENSMUST00000039280 Wdr66E9Q743 1299 aa22.82■■□□□ 1.24
Scaf4-201ENSMUST00000039280 Chic1Q8CBW7 227 aa22.79■■□□□ 1.24
Scaf4-201ENSMUST00000039280 Brd4Q9ESU6 1400 aaKnown RBP22.79■■□□□ 1.24
Scaf4-201ENSMUST00000039280 ScribQ80U72 1612 aa22.76■■□□□ 1.23
Scaf4-201ENSMUST00000039280 NefmP08553 848 aa22.64■■□□□ 1.22
Scaf4-201ENSMUST00000039280 Cep164Q5DU05 1446 aa22.62■■□□□ 1.21
Scaf4-201ENSMUST00000039280 Ube2uB1AUC4 352 aa22.52■■□□□ 1.2
Scaf4-201ENSMUST00000039280 Neurod1Q60867 357 aa22.45■■□□□ 1.18
Scaf4-201ENSMUST00000039280 Ap3b1Q9Z1T1 1105 aa22.44■■□□□ 1.18
Scaf4-201ENSMUST00000039280 Mier1Q5UAK0 511 aa22.37■■□□□ 1.17
Scaf4-201ENSMUST00000039280 CenpbP27790 599 aa22.36■■□□□ 1.17
Scaf4-201ENSMUST00000039280 Sycp2Q9CUU3 1500 aa22.33■■□□□ 1.17
Scaf4-201ENSMUST00000039280 Golga3P55937 1487 aa22.27■■□□□ 1.16
Scaf4-201ENSMUST00000039280 Rsf1E9PWW9 1441 aaKnown RBP22.22■■□□□ 1.15
Scaf4-201ENSMUST00000039280 Plekhg3Q4VAC9 1341 aa22.2■■□□□ 1.14
Scaf4-201ENSMUST00000039280 Crybg2B7ZCC2 1516 aa22.2■■□□□ 1.14
Scaf4-201ENSMUST00000039280 Cdk11bP24788 784 aaKnown RBP22.15■■□□□ 1.14
Scaf4-201ENSMUST00000039280 Npm1Q61937 292 aaKnown RBP22.14■■□□□ 1.14
Scaf4-201ENSMUST00000039280 Myt1Q8CFC2 1127 aa22.12■■□□□ 1.13
Scaf4-201ENSMUST00000039280 Smarca2Q6DIC0 1577 aa22.11■■□□□ 1.13
Scaf4-201ENSMUST00000039280 Cecr2E9Q2Z1 1453 aa22.09■■□□□ 1.13
Scaf4-201ENSMUST00000039280 Fam50aQ9WV03 339 aaKnown RBP22.09■■□□□ 1.13
Scaf4-201ENSMUST00000039280 Ppargc1bQ8VHJ7 1014 aa22.05■■□□□ 1.12
Scaf4-201ENSMUST00000039280 Ccdc88bQ4QRL3 1481 aa22.02■■□□□ 1.12
Scaf4-201ENSMUST00000039280 Nop58Q6DFW4 536 aaKnown RBP22.02■■□□□ 1.11
Scaf4-201ENSMUST00000039280 Sall2Q9QX96 1004 aa21.98■■□□□ 1.11
Scaf4-201ENSMUST00000039280 Clip1Q922J3 1391 aa21.97■■□□□ 1.11
Scaf4-201ENSMUST00000039280 Lmod2Q3UHZ5 550 aa21.96■■□□□ 1.11
Scaf4-201ENSMUST00000039280 Csrnp3P59055 597 aa21.91■■□□□ 1.1
Scaf4-201ENSMUST00000039280 Anks4bQ8K3X6 423 aa21.9■■□□□ 1.1
Scaf4-201ENSMUST00000039280 Ubl4bQ9CQ84 188 aa21.9■■□□□ 1.1
Scaf4-201ENSMUST00000039280 TonslQ6NZL6 1363 aa21.88■■□□□ 1.09
Scaf4-201ENSMUST00000039280 CftrP26361 1476 aa21.86■■□□□ 1.09
Scaf4-201ENSMUST00000039280 Synj1Q8CHC4 1574 aa21.79■■□□□ 1.08
Scaf4-201ENSMUST00000039280 Kif15Q6P9L6 1387 aa21.77■■□□□ 1.08
Scaf4-201ENSMUST00000039280 1700123L14RikQ3V2K7 440 aa21.77■■□□□ 1.08
Scaf4-201ENSMUST00000039280 Eid3Q3V124 375 aa21.71■■□□□ 1.07
Scaf4-201ENSMUST00000039280 NclP09405 707 aaKnown RBP21.71■■□□□ 1.07
Scaf4-201ENSMUST00000039280 Pelp1Q9DBD5 1123 aaKnown RBP21.68■■□□□ 1.06
Scaf4-201ENSMUST00000039280 Pds5bQ4VA53 1446 aaKnown RBP21.64■■□□□ 1.05
Scaf4-201ENSMUST00000039280 Aplp2Q06335 707 aa21.62■■□□□ 1.05
Scaf4-201ENSMUST00000039280 ClspnQ80YR7 1315 aa21.62■■□□□ 1.05
Scaf4-201ENSMUST00000039280 Gm38655A0A286YDK6 273 aa21.59■■□□□ 1.05
Scaf4-201ENSMUST00000039280 Ercc6F8VPZ5 1481 aa21.59■■□□□ 1.05
Scaf4-201ENSMUST00000039280 Fmn1Q05860 1466 aa21.59■■□□□ 1.05
Scaf4-201ENSMUST00000039280 Slc24a1Q91WD8 1130 aa21.58■■□□□ 1.04
Scaf4-201ENSMUST00000039280 Setd5Q5XJV7 1441 aa21.56■■□□□ 1.04
Scaf4-201ENSMUST00000039280 Smarca4Q3TKT4 1613 aaKnown RBP21.52■■□□□ 1.04
Scaf4-201ENSMUST00000039280 Tnnt3Q9QZ47 272 aa21.5■■□□□ 1.03
Scaf4-201ENSMUST00000039280 BlmO88700 1416 aa21.49■■□□□ 1.03
Scaf4-201ENSMUST00000039280 Cep162Q6ZQ06 1403 aa21.49■■□□□ 1.03
Scaf4-201ENSMUST00000039280 DiexfQ8BTT6 772 aaKnown RBP21.49■■□□□ 1.03
Scaf4-201ENSMUST00000039280 Atad2bE9Q166 1460 aaKnown RBP21.45■■□□□ 1.02
Scaf4-201ENSMUST00000039280 Ccdc18Q640L5 1455 aa21.43■■□□□ 1.02
Scaf4-201ENSMUST00000039280 Cttnbp2B9EJA2 1648 aa21.43■■□□□ 1.02
Scaf4-201ENSMUST00000039280 Stra8P70278 393 aa21.41■■□□□ 1.02
Scaf4-201ENSMUST00000039280 Eea1Q8BL66 1411 aa21.4■■□□□ 1.02
Scaf4-201ENSMUST00000039280 Mapk8ip2Q9ERE9 830 aa21.36■■□□□ 1.01
Scaf4-201ENSMUST00000039280 BicraF8VPZ9 1578 aa21.36■■□□□ 1.01
Scaf4-201ENSMUST00000039280 Aebp2Q9Z248 504 aaKnown RBP21.34■■□□□ 1.01
Scaf4-201ENSMUST00000039280 Rapgef2Q8CHG7 1496 aa21.31■■□□□ 1
Scaf4-201ENSMUST00000039280 Zbtb7cQ8VCZ7 619 aa21.29■■□□□ 1
Scaf4-201ENSMUST00000039280 Chic2Q9D9G3 165 aa21.29■■□□□ 1
Scaf4-201ENSMUST00000039280 Fkbp15Q6P9Q6 1216 aaKnown RBP21.28■■□□□ 1
Scaf4-201ENSMUST00000039280 Iqgap2Q3UQ44 1575 aa21.28■■□□□ 1
Scaf4-201ENSMUST00000039280 Ccer2J3QPU5 274 aa21.14■□□□□ 0.97
Scaf4-201ENSMUST00000039280 Cux2P70298 1426 aa21.14■□□□□ 0.97
Scaf4-201ENSMUST00000039280 Ifnlr1Q8CGK5 535 aa21.13■□□□□ 0.97
Scaf4-201ENSMUST00000039280 Cc2d2aQ8CFW7 1633 aa21.12■□□□□ 0.97
Scaf4-201ENSMUST00000039280 NrdcQ8BHG1 1161 aa21.11■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 415.7 ms