RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Mllt11P97783 90 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm4763Q8CFJ5 196 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Q9D8Q6 235 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Igkv4-59A0A0B4J1I8 117 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm44965A0A0N4SVR3 59 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Olfr312Q7TRZ9 308 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 A130051J06RikQ8CAU1 227 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Pradc1Q9D9N8 188 aa9.23□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv1-22A0A075B5U7 117 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv3-4A0A0A6YXF1 117 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Fam240aJ3QNP9 97 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Fxyd7P59648 80 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ss18Q62280 418 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Klk15Q8CGR4 254 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Klk5Q9D140 293 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Bub3Q9WVA3 326 aa9.22□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Ighv1-9A0A0A6YW37 117 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm20481G3UXK4 153 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 P01725 110 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Rpl32P62911 135 aaKnown RBP9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm21370Q3T9V6 190 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Cks1brtQ3UNC9 96 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Trav7-2Q5R1I3 112 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Gm5105Q8C6Y9 112 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 9130230L23RikQ8CC80 163 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Stpg1Q9D2F5 341 aa9.21□□□□□ -0.93
Ufd1-201ENSMUST00000005394 Utp20Q5XG71 2788 aaKnown RBP9.21□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Sumo2P61957 95 aaKnown RBP9.21□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Foxi1Q922I5 372 aa9.21□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Uqcrfs1Q9CR68 274 aa9.21□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Celsr2Q9R0M0 2920 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Hcfc1Q61191 2045 aaKnown RBP9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Rpl36-ps4A0A140T8U4 117 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Brd3osA0A1B0GRB6 84 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Tmem262D3Z338 116 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 SmcpP15265 143 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Hist1h1tQ07133 208 aa9.2□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ighv3-1A0A075B5S6 116 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ighv1-81A0A075B5Y4 117 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Nsun4C4P6S0 806 aaKnown RBP9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Smim20D3Z7Q2 69 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 1700056E22RikF7CNM6 234 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Csn3P06796 181 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Mrps21P58059 87 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Defb18Q30KP5 85 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm12888Q3UW77 119 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Il1f10Q8R459 152 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 NdpP48744 131 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ccl21aP84444 133 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ccl21bP86792 133 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ccl21cP86793 133 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Q9CX25 107 aa9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Srsf9Q9D0B0 222 aaKnown RBP9.19□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Prrc2aQ7TSC1 2158 aaKnown RBP9.18□□□□□ -0.94
Ufd1-201ENSMUST00000005394 4930447F04RikA2AFR2 126 aa9.18□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm9925F6T2U3 160 aa9.18□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ins1P01325 108 aa9.18□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Map6d1Q14BB9 191 aa9.18□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ighv1-80A0A075B5Y3 117 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 PolP10400 120 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Samd5Q3V1H9 173 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ccl24Q9JKC0 119 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Col6a4A2AX52 2309 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Igkv4-81A0A0G2JEY5 119 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Onecut1O08755 465 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm5629P06327 117 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Defb2P82020 71 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm10735Q3US96 136 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Olfr313Q5NC55 308 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Minos1Q7TNS2 76 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Morn3Q8C5T4 241 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Cysltr1Q99JA4 352 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Q9DAB9 146 aa9.17□□□□□ -0.94
Ufd1-201ENSMUST00000005394 9530053A07RikE9PVG8 2581 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Abca1P41233 2261 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 1700067P10RikG3X8U2 183 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 TshbP12656 138 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Psmb8P28063 276 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm1553Q66VB7 94 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Tln2Q71LX4 2375 aa9.16□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ighv4-1A0A075B5R5 116 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm5089A1L3C8 106 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Cd59aO55186 123 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Dmrt3Q80WT2 476 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Gm16223Q8CBM3 117 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Pla2g2dQ9WVF6 144 aa9.15□□□□□ -0.94
Ufd1-201ENSMUST00000005394 Ighv14-1A0A075B5R4 117 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Ighv1-75A0A075B5Y2 117 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Tmem95P0DJF3 176 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Edn3P48299 214 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Atp5eP56382 52 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 BC025920Q3US60 128 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 4930596D02RikQ3V0H9 216 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Khdc1cQ4KL78 166 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Rs1Q9Z1L4 224 aa9.15□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Gm28044L7N1X0 119 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Svs5P30933 122 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Tmem170bP86050 132 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 SrarpQ3ULG3 163 aa9.14□□□□□ -0.95
Ufd1-201ENSMUST00000005394 Spata46Q4FZF2 204 aa9.14□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms