RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Gm35339A0A140LHH9 1649 aa23.35■■□□□ 1.33
Ufd1-201ENSMUST00000005394 NischQ80TM9 1593 aa23.08■■□□□ 1.28
Ufd1-201ENSMUST00000005394 Abcc8B2RUS7 1588 aa22.33■■□□□ 1.16
Ufd1-201ENSMUST00000005394 Abcc9P70170 1546 aa22.3■■□□□ 1.16
Ufd1-201ENSMUST00000005394 ScribQ80U72 1612 aa21.58■■□□□ 1.04
Ufd1-201ENSMUST00000005394 Rtl1Q7M732 1744 aa21.17■□□□□ 0.98
Ufd1-201ENSMUST00000005394 NacadQ5SWP3 1504 aa20.89■□□□□ 0.94
Ufd1-201ENSMUST00000005394 Kdm5dQ62240 1548 aa20.86■□□□□ 0.93
Ufd1-201ENSMUST00000005394 Rpgrip1Q9EPQ2 1331 aa20.84■□□□□ 0.93
Ufd1-201ENSMUST00000005394 Ccdc180J3QNE4 1664 aa20.82■□□□□ 0.92
Ufd1-201ENSMUST00000005394 Sycp2Q9CUU3 1500 aa20.49■□□□□ 0.87
Ufd1-201ENSMUST00000005394 Dcaf1Q80TR8 1506 aa20.47■□□□□ 0.87
Ufd1-201ENSMUST00000005394 Rhox8Q6VSS7 320 aa20.35■□□□□ 0.85
Ufd1-201ENSMUST00000005394 BicraF8VPZ9 1578 aa20.23■□□□□ 0.83
Ufd1-201ENSMUST00000005394 Rb1cc1Q9ESK9 1588 aa20.1■□□□□ 0.81
Ufd1-201ENSMUST00000005394 Zcchc6Q5BLK4 1491 aaKnown RBP20.1■□□□□ 0.81
Ufd1-201ENSMUST00000005394 Acin1Q9JIX8 1338 aaKnown RBP20.07■□□□□ 0.8
Ufd1-201ENSMUST00000005394 Dnajc5bQ9CQ94 199 aa19.89■□□□□ 0.77
Ufd1-201ENSMUST00000005394 Baz1aO88379 1555 aa19.8■□□□□ 0.76
Ufd1-201ENSMUST00000005394 Crybg2B7ZCC2 1516 aa19.72■□□□□ 0.75
Ufd1-201ENSMUST00000005394 HrcG5E8J6 738 aa19.71■□□□□ 0.75
Ufd1-201ENSMUST00000005394 Pds5bQ4VA53 1446 aaKnown RBP19.68■□□□□ 0.74
Ufd1-201ENSMUST00000005394 Thoc2B1AZI6 1594 aaKnown RBP19.52■□□□□ 0.72
Ufd1-201ENSMUST00000005394 Pcgf6Q99NA9 353 aa19.48■□□□□ 0.71
Ufd1-201ENSMUST00000005394 Atad2bE9Q166 1460 aaKnown RBP19.48■□□□□ 0.71
Ufd1-201ENSMUST00000005394 Ercc6F8VPZ5 1481 aa19.27■□□□□ 0.68
Ufd1-201ENSMUST00000005394 Smarca4Q3TKT4 1613 aaKnown RBP19.27■□□□□ 0.68
Ufd1-201ENSMUST00000005394 Smarca2Q6DIC0 1577 aa19.25■□□□□ 0.67
Ufd1-201ENSMUST00000005394 Cc2d2aQ8CFW7 1633 aa19.24■□□□□ 0.67
Ufd1-201ENSMUST00000005394 Cecr2E9Q2Z1 1453 aa19.24■□□□□ 0.67
Ufd1-201ENSMUST00000005394 Trim41Q5NCC3 630 aa19.21■□□□□ 0.67
Ufd1-201ENSMUST00000005394 Iqgap2Q3UQ44 1575 aa19.19■□□□□ 0.66
Ufd1-201ENSMUST00000005394 Ehmt2Q9Z148 1263 aaKnown RBP19.12■□□□□ 0.65
Ufd1-201ENSMUST00000005394 Fam135aQ6NS59 1506 aa19.06■□□□□ 0.64
Ufd1-201ENSMUST00000005394 Frmpd1A2AKB4 1549 aa19.03■□□□□ 0.64
Ufd1-201ENSMUST00000005394 Wdr62Q3U3T8 1523 aa19.03■□□□□ 0.64
Ufd1-201ENSMUST00000005394 Phldb1Q6PDH0 1371 aaKnown RBP18.95■□□□□ 0.62
Ufd1-201ENSMUST00000005394 Cep164Q5DU05 1446 aa18.89■□□□□ 0.62
Ufd1-201ENSMUST00000005394 Supt5hO55201 1082 aaKnown RBP18.89■□□□□ 0.61
Ufd1-201ENSMUST00000005394 Ubl4bQ9CQ84 188 aa18.84■□□□□ 0.61
Ufd1-201ENSMUST00000005394 Baz1bQ9Z277 1479 aa18.79■□□□□ 0.6
Ufd1-201ENSMUST00000005394 Ccdc136Q3TVA9 1136 aa18.77■□□□□ 0.6
Ufd1-201ENSMUST00000005394 CftrP26361 1476 aa18.76■□□□□ 0.59
Ufd1-201ENSMUST00000005394 Unc13aQ4KUS2 1712 aa18.74■□□□□ 0.59
Ufd1-201ENSMUST00000005394 Neurod1Q60867 357 aa18.72■□□□□ 0.59
Ufd1-201ENSMUST00000005394 Synj1Q8CHC4 1574 aa18.71■□□□□ 0.59
Ufd1-201ENSMUST00000005394 Cttnbp2B9EJA2 1648 aa18.71■□□□□ 0.59
Ufd1-201ENSMUST00000005394 Las1lA2BE28 776 aaKnown RBP18.7■□□□□ 0.58
Ufd1-201ENSMUST00000005394 Brd4Q9ESU6 1400 aaKnown RBP18.69■□□□□ 0.58
Ufd1-201ENSMUST00000005394 Mrc2Q64449 1479 aa18.65■□□□□ 0.58
Ufd1-201ENSMUST00000005394 NefmP08553 848 aa18.61■□□□□ 0.57
Ufd1-201ENSMUST00000005394 Esf1Q3V1V3 845 aaKnown RBP18.51■□□□□ 0.55
Ufd1-201ENSMUST00000005394 Cngb1E1AZ71 1325 aa18.43■□□□□ 0.54
Ufd1-201ENSMUST00000005394 Myt1Q8CFC2 1127 aa18.42■□□□□ 0.54
Ufd1-201ENSMUST00000005394 Anks4bQ8K3X6 423 aa18.42■□□□□ 0.54
Ufd1-201ENSMUST00000005394 Rsf1E9PWW9 1441 aaKnown RBP18.36■□□□□ 0.53
Ufd1-201ENSMUST00000005394 Kif15Q6P9L6 1387 aa18.35■□□□□ 0.53
Ufd1-201ENSMUST00000005394 Cux2P70298 1426 aa18.35■□□□□ 0.53
Ufd1-201ENSMUST00000005394 Sall2Q9QX96 1004 aa18.29■□□□□ 0.52
Ufd1-201ENSMUST00000005394 Mier1Q5UAK0 511 aa18.28■□□□□ 0.52
Ufd1-201ENSMUST00000005394 Zeb1Q64318 1117 aa18.27■□□□□ 0.52
Ufd1-201ENSMUST00000005394 Lrriq1Q0P5X1 1673 aa18.24■□□□□ 0.51
Ufd1-201ENSMUST00000005394 1700123L14RikQ3V2K7 440 aa18.23■□□□□ 0.51
Ufd1-201ENSMUST00000005394 Lamc3Q9R0B6 1581 aa18.21■□□□□ 0.51
Ufd1-201ENSMUST00000005394 Kif21aQ9QXL2 1672 aa18.2■□□□□ 0.5
Ufd1-201ENSMUST00000005394 Npm1Q61937 292 aaKnown RBP18.19■□□□□ 0.5
Ufd1-201ENSMUST00000005394 Chic1Q8CBW7 227 aa18.15■□□□□ 0.5
Ufd1-201ENSMUST00000005394 Aplp2Q06335 707 aa18.13■□□□□ 0.49
Ufd1-201ENSMUST00000005394 Golga3P55937 1487 aa18.11■□□□□ 0.49
Ufd1-201ENSMUST00000005394 Ccdc88bQ4QRL3 1481 aa18.06■□□□□ 0.48
Ufd1-201ENSMUST00000005394 Dnajc5P60904 198 aa18.05■□□□□ 0.48
Ufd1-201ENSMUST00000005394 Csrnp3P59055 597 aa18.04■□□□□ 0.48
Ufd1-201ENSMUST00000005394 CenpbP27790 599 aa18.04■□□□□ 0.48
Ufd1-201ENSMUST00000005394 Il27Q8K3I6 234 aa18.03■□□□□ 0.48
Ufd1-201ENSMUST00000005394 Ccdc18Q640L5 1455 aa17.97■□□□□ 0.47
Ufd1-201ENSMUST00000005394 ClspnQ80YR7 1315 aa17.97■□□□□ 0.47
Ufd1-201ENSMUST00000005394 Top2bQ64511 1612 aa17.97■□□□□ 0.47
Ufd1-201ENSMUST00000005394 Eif4g3Q80XI3 1579 aaKnown RBP17.96■□□□□ 0.47
Ufd1-201ENSMUST00000005394 TnnQ80Z71 1560 aa17.96■□□□□ 0.47
Ufd1-201ENSMUST00000005394 Dhx29Q6PGC1 1365 aaKnown RBP17.96■□□□□ 0.47
Ufd1-201ENSMUST00000005394 Cdk11bP24788 784 aaKnown RBP17.95■□□□□ 0.46
Ufd1-201ENSMUST00000005394 Gab3Q8BSM5 595 aa17.95■□□□□ 0.46
Ufd1-201ENSMUST00000005394 Urb2E9Q7L1 1524 aaKnown RBP17.93■□□□□ 0.46
Ufd1-201ENSMUST00000005394 Plb1Q3TTY0 1478 aa17.91■□□□□ 0.46
Ufd1-201ENSMUST00000005394 LrpprcQ6PB66 1392 aaKnown RBP17.91■□□□□ 0.46
Ufd1-201ENSMUST00000005394 Camsap1A2AHC3 1581 aa17.88■□□□□ 0.45
Ufd1-201ENSMUST00000005394 Nop58Q6DFW4 536 aaKnown RBP17.88■□□□□ 0.45
Ufd1-201ENSMUST00000005394 Aebp2Q9Z248 504 aaKnown RBP17.84■□□□□ 0.45
Ufd1-201ENSMUST00000005394 Crocc2F6XLV1 1638 aa17.84■□□□□ 0.45
Ufd1-201ENSMUST00000005394 Fmn1Q05860 1466 aa17.81■□□□□ 0.44
Ufd1-201ENSMUST00000005394 Shroom2A2ALU4 1481 aa17.8■□□□□ 0.44
Ufd1-201ENSMUST00000005394 Rapgef2Q8CHG7 1496 aa17.8■□□□□ 0.44
Ufd1-201ENSMUST00000005394 PogzQ8BZH4 1409 aaKnown RBP17.78■□□□□ 0.44
Ufd1-201ENSMUST00000005394 Wdr66E9Q743 1299 aa17.76■□□□□ 0.43
Ufd1-201ENSMUST00000005394 Ift140E9PY46 1464 aa17.72■□□□□ 0.43
Ufd1-201ENSMUST00000005394 Duox2A2AQ99 1517 aa17.7■□□□□ 0.42
Ufd1-201ENSMUST00000005394 DiexfQ8BTT6 772 aaKnown RBP17.68■□□□□ 0.42
Ufd1-201ENSMUST00000005394 Pabpn1Q8CCS6 302 aaKnown RBP17.68■□□□□ 0.42
Ufd1-201ENSMUST00000005394 Rusc2Q80U22 1514 aa17.67■□□□□ 0.42
Ufd1-201ENSMUST00000005394 Grin2bQ01097 1482 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms