Protein–RNA interactions for Protein: Q4KL78

Khdc1c, KH homology domain-containing protein 1C, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc1cQ4KL78 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Khdc1cQ4KL78 Gm25239-201ENSMUST00000174915 86 ntBASIC24.73■■□□□ 1.55
Khdc1cQ4KL78 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Khdc1cQ4KL78 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Khdc1cQ4KL78 Psd-208ENSMUST00000224556 2034 ntBASIC23.62■■□□□ 1.37
Khdc1cQ4KL78 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Khdc1cQ4KL78 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Khdc1cQ4KL78 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Khdc1cQ4KL78 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Khdc1cQ4KL78 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Khdc1cQ4KL78 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Khdc1cQ4KL78 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Khdc1cQ4KL78 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Khdc1cQ4KL78 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Khdc1cQ4KL78 Gm15042-201ENSMUST00000120212 883 ntBASIC22.35■■□□□ 1.17
Khdc1cQ4KL78 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.32■■□□□ 1.16
Khdc1cQ4KL78 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Khdc1cQ4KL78 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Khdc1cQ4KL78 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Khdc1cQ4KL78 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Khdc1cQ4KL78 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Khdc1cQ4KL78 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Khdc1cQ4KL78 Gm15045-201ENSMUST00000117359 883 ntBASIC21.93■■□□□ 1.1
Khdc1cQ4KL78 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Khdc1cQ4KL78 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Khdc1cQ4KL78 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Khdc1cQ4KL78 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Khdc1cQ4KL78 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Khdc1cQ4KL78 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Khdc1cQ4KL78 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Khdc1cQ4KL78 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Khdc1cQ4KL78 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.56■■□□□ 1.04
Khdc1cQ4KL78 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Khdc1cQ4KL78 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.54■■□□□ 1.04
Khdc1cQ4KL78 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.53■■□□□ 1.04
Khdc1cQ4KL78 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Khdc1cQ4KL78 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Khdc1cQ4KL78 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Khdc1cQ4KL78 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Khdc1cQ4KL78 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Khdc1cQ4KL78 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.35■■□□□ 1.01
Khdc1cQ4KL78 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Khdc1cQ4KL78 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.31■■□□□ 1
Khdc1cQ4KL78 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Khdc1cQ4KL78 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Khdc1cQ4KL78 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Khdc1cQ4KL78 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.16■□□□□ 0.98
Khdc1cQ4KL78 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.12■□□□□ 0.97
Khdc1cQ4KL78 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Khdc1cQ4KL78 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Khdc1cQ4KL78 Gm24109-201ENSMUST00000175489 103 ntBASIC21.05■□□□□ 0.96
Khdc1cQ4KL78 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Khdc1cQ4KL78 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Khdc1cQ4KL78 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Khdc1cQ4KL78 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Khdc1cQ4KL78 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Khdc1cQ4KL78 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Khdc1cQ4KL78 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Khdc1cQ4KL78 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Khdc1cQ4KL78 Gm23366-201ENSMUST00000175022 89 ntBASIC20.76■□□□□ 0.91
Khdc1cQ4KL78 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Khdc1cQ4KL78 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Khdc1cQ4KL78 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Khdc1cQ4KL78 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.71■□□□□ 0.91
Khdc1cQ4KL78 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Khdc1cQ4KL78 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Khdc1cQ4KL78 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Khdc1cQ4KL78 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Khdc1cQ4KL78 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Khdc1cQ4KL78 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc1cQ4KL78 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Khdc1cQ4KL78 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Khdc1cQ4KL78 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Khdc1cQ4KL78 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.56■□□□□ 0.88
Khdc1cQ4KL78 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Khdc1cQ4KL78 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc1cQ4KL78 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc1cQ4KL78 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc1cQ4KL78 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc1cQ4KL78 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Khdc1cQ4KL78 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc1cQ4KL78 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Khdc1cQ4KL78 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Khdc1cQ4KL78 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Khdc1cQ4KL78 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Khdc1cQ4KL78 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc1cQ4KL78 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Khdc1cQ4KL78 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Khdc1cQ4KL78 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Khdc1cQ4KL78 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Khdc1cQ4KL78 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Khdc1cQ4KL78 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Khdc1cQ4KL78 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Khdc1cQ4KL78 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc1cQ4KL78 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Khdc1cQ4KL78 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Khdc1cQ4KL78 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc1cQ4KL78 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Khdc1cQ4KL78 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.05■□□□□ 0.8
Khdc1cQ4KL78 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms