Protein–RNA interactions for Protein: L7N1X0

Gm28044, Predicted gene, 28044, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28044L7N1X0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Gm28044L7N1X0 Gm25239-201ENSMUST00000174915 86 ntBASIC24.35■■□□□ 1.49
Gm28044L7N1X0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm28044L7N1X0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Gm28044L7N1X0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Gm28044L7N1X0 Psd-208ENSMUST00000224556 2034 ntBASIC22.83■■□□□ 1.25
Gm28044L7N1X0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Gm28044L7N1X0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
Gm28044L7N1X0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm28044L7N1X0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm28044L7N1X0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm28044L7N1X0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm28044L7N1X0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm28044L7N1X0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Gm28044L7N1X0 Gm15042-201ENSMUST00000120212 883 ntBASIC21.85■■□□□ 1.09
Gm28044L7N1X0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28044L7N1X0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm28044L7N1X0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm28044L7N1X0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm28044L7N1X0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Gm28044L7N1X0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Gm28044L7N1X0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.68■■□□□ 1.06
Gm28044L7N1X0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Gm28044L7N1X0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gm28044L7N1X0 Gm15045-201ENSMUST00000117359 883 ntBASIC21.47■■□□□ 1.03
Gm28044L7N1X0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Gm28044L7N1X0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gm28044L7N1X0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gm28044L7N1X0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Gm28044L7N1X0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm28044L7N1X0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm28044L7N1X0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Gm28044L7N1X0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm28044L7N1X0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm28044L7N1X0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm28044L7N1X0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm28044L7N1X0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.01■□□□□ 0.95
Gm28044L7N1X0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm28044L7N1X0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28044L7N1X0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm28044L7N1X0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.93■□□□□ 0.94
Gm28044L7N1X0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm28044L7N1X0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.85■□□□□ 0.93
Gm28044L7N1X0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm28044L7N1X0 Gm24109-201ENSMUST00000175489 103 ntBASIC20.82■□□□□ 0.92
Gm28044L7N1X0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.81■□□□□ 0.92
Gm28044L7N1X0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Gm28044L7N1X0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm28044L7N1X0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.7■□□□□ 0.9
Gm28044L7N1X0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm28044L7N1X0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm28044L7N1X0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm28044L7N1X0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm28044L7N1X0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm28044L7N1X0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.58■□□□□ 0.89
Gm28044L7N1X0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gm28044L7N1X0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28044L7N1X0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28044L7N1X0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28044L7N1X0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm28044L7N1X0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28044L7N1X0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm28044L7N1X0 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.43■□□□□ 0.86
Gm28044L7N1X0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.42■□□□□ 0.86
Gm28044L7N1X0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm28044L7N1X0 Gm23366-201ENSMUST00000175022 89 ntBASIC20.38■□□□□ 0.85
Gm28044L7N1X0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm28044L7N1X0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm28044L7N1X0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm28044L7N1X0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28044L7N1X0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm28044L7N1X0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm28044L7N1X0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28044L7N1X0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Gm28044L7N1X0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm28044L7N1X0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28044L7N1X0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28044L7N1X0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28044L7N1X0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28044L7N1X0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.14■□□□□ 0.81
Gm28044L7N1X0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28044L7N1X0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Gm28044L7N1X0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gm28044L7N1X0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28044L7N1X0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.06■□□□□ 0.8
Gm28044L7N1X0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28044L7N1X0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28044L7N1X0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Gm28044L7N1X0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28044L7N1X0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28044L7N1X0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28044L7N1X0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm28044L7N1X0 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm28044L7N1X0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm28044L7N1X0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28044L7N1X0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm28044L7N1X0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28044L7N1X0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm28044L7N1X0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm28044L7N1X0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms