Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 Gm25239-201ENSMUST00000174915 86 ntBASIC26.7■■□□□ 1.86
Ighv1-9A0A0A6YW37 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ighv1-9A0A0A6YW37 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ighv1-9A0A0A6YW37 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Ighv1-9A0A0A6YW37 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ighv1-9A0A0A6YW37 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ighv1-9A0A0A6YW37 Psd-208ENSMUST00000224556 2034 ntBASIC24■■□□□ 1.43
Ighv1-9A0A0A6YW37 Gm15042-201ENSMUST00000120212 883 ntBASIC23.88■■□□□ 1.41
Ighv1-9A0A0A6YW37 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ighv1-9A0A0A6YW37 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ighv1-9A0A0A6YW37 Gm15045-201ENSMUST00000117359 883 ntBASIC23.41■■□□□ 1.34
Ighv1-9A0A0A6YW37 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ighv1-9A0A0A6YW37 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.28■■□□□ 1.32
Ighv1-9A0A0A6YW37 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ighv1-9A0A0A6YW37 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-9A0A0A6YW37 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ighv1-9A0A0A6YW37 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-9A0A0A6YW37 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-9A0A0A6YW37 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ighv1-9A0A0A6YW37 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ighv1-9A0A0A6YW37 Gm24109-201ENSMUST00000175489 103 ntBASIC22.87■■□□□ 1.25
Ighv1-9A0A0A6YW37 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ighv1-9A0A0A6YW37 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv1-9A0A0A6YW37 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv1-9A0A0A6YW37 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ighv1-9A0A0A6YW37 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv1-9A0A0A6YW37 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.61■■□□□ 1.21
Ighv1-9A0A0A6YW37 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ighv1-9A0A0A6YW37 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ighv1-9A0A0A6YW37 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.45■■□□□ 1.18
Ighv1-9A0A0A6YW37 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ighv1-9A0A0A6YW37 Gm23366-201ENSMUST00000175022 89 ntBASIC22.4■■□□□ 1.18
Ighv1-9A0A0A6YW37 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-9A0A0A6YW37 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ighv1-9A0A0A6YW37 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-9A0A0A6YW37 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ighv1-9A0A0A6YW37 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-9A0A0A6YW37 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-9A0A0A6YW37 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ighv1-9A0A0A6YW37 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ighv1-9A0A0A6YW37 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.07■■□□□ 1.12
Ighv1-9A0A0A6YW37 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.04■■□□□ 1.12
Ighv1-9A0A0A6YW37 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ighv1-9A0A0A6YW37 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.98■■□□□ 1.11
Ighv1-9A0A0A6YW37 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ighv1-9A0A0A6YW37 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.94■■□□□ 1.1
Ighv1-9A0A0A6YW37 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ighv1-9A0A0A6YW37 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ighv1-9A0A0A6YW37 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv1-9A0A0A6YW37 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ighv1-9A0A0A6YW37 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ighv1-9A0A0A6YW37 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ighv1-9A0A0A6YW37 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ighv1-9A0A0A6YW37 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.46■■□□□ 1.03
Ighv1-9A0A0A6YW37 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.45■■□□□ 1.02
Ighv1-9A0A0A6YW37 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ighv1-9A0A0A6YW37 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-9A0A0A6YW37 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ighv1-9A0A0A6YW37 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ighv1-9A0A0A6YW37 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.3■■□□□ 1
Ighv1-9A0A0A6YW37 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ighv1-9A0A0A6YW37 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ighv1-9A0A0A6YW37 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ighv1-9A0A0A6YW37 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Ighv1-9A0A0A6YW37 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Ighv1-9A0A0A6YW37 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ighv1-9A0A0A6YW37 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ighv1-9A0A0A6YW37 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ighv1-9A0A0A6YW37 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.12■□□□□ 0.97
Ighv1-9A0A0A6YW37 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ighv1-9A0A0A6YW37 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.1■□□□□ 0.97
Ighv1-9A0A0A6YW37 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ighv1-9A0A0A6YW37 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-9A0A0A6YW37 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ighv1-9A0A0A6YW37 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ighv1-9A0A0A6YW37 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ighv1-9A0A0A6YW37 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-9A0A0A6YW37 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ighv1-9A0A0A6YW37 Gm27325-201ENSMUST00000175467 74 ntBASIC21.02■□□□□ 0.96
Ighv1-9A0A0A6YW37 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-9A0A0A6YW37 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-9A0A0A6YW37 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-9A0A0A6YW37 Gm25238-201ENSMUST00000174914 89 ntBASIC20.89■□□□□ 0.93
Ighv1-9A0A0A6YW37 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-9A0A0A6YW37 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.85■□□□□ 0.93
Ighv1-9A0A0A6YW37 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ighv1-9A0A0A6YW37 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-9A0A0A6YW37 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-9A0A0A6YW37 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-9A0A0A6YW37 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-9A0A0A6YW37 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ighv1-9A0A0A6YW37 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-9A0A0A6YW37 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ighv1-9A0A0A6YW37 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.77■□□□□ 0.92
Ighv1-9A0A0A6YW37 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ighv1-9A0A0A6YW37 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ighv1-9A0A0A6YW37 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ighv1-9A0A0A6YW37 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv1-9A0A0A6YW37 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv1-9A0A0A6YW37 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms