Protein–RNA interactions for Protein: Q8CC80

9130230L23Rik, RIKEN cDNA 9130230L23 gene, mousemouse

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9130230L23RikQ8CC80 Gm25239-201ENSMUST00000174915 86 ntBASIC31.53■■■□□ 2.64
9130230L23RikQ8CC80 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
9130230L23RikQ8CC80 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
9130230L23RikQ8CC80 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
9130230L23RikQ8CC80 Gm15042-201ENSMUST00000120212 883 ntBASIC27.7■■■□□ 2.02
9130230L23RikQ8CC80 Gm24109-201ENSMUST00000175489 103 ntBASIC27.26■■□□□ 1.95
9130230L23RikQ8CC80 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
9130230L23RikQ8CC80 Gm15045-201ENSMUST00000117359 883 ntBASIC27.12■■□□□ 1.93
9130230L23RikQ8CC80 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
9130230L23RikQ8CC80 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
9130230L23RikQ8CC80 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
9130230L23RikQ8CC80 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
9130230L23RikQ8CC80 Gm23366-201ENSMUST00000175022 89 ntBASIC26.36■■□□□ 1.81
9130230L23RikQ8CC80 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
9130230L23RikQ8CC80 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
9130230L23RikQ8CC80 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.93■■□□□ 1.74
9130230L23RikQ8CC80 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
9130230L23RikQ8CC80 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
9130230L23RikQ8CC80 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
9130230L23RikQ8CC80 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
9130230L23RikQ8CC80 Psd-208ENSMUST00000224556 2034 ntBASIC25.61■■□□□ 1.69
9130230L23RikQ8CC80 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
9130230L23RikQ8CC80 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
9130230L23RikQ8CC80 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
9130230L23RikQ8CC80 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
9130230L23RikQ8CC80 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
9130230L23RikQ8CC80 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.4■■□□□ 1.66
9130230L23RikQ8CC80 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.36■■□□□ 1.65
9130230L23RikQ8CC80 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
9130230L23RikQ8CC80 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.23■■□□□ 1.63
9130230L23RikQ8CC80 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.05■■□□□ 1.6
9130230L23RikQ8CC80 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
9130230L23RikQ8CC80 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.94■■□□□ 1.58
9130230L23RikQ8CC80 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
9130230L23RikQ8CC80 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
9130230L23RikQ8CC80 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
9130230L23RikQ8CC80 Gm25238-201ENSMUST00000174914 89 ntBASIC24.85■■□□□ 1.57
9130230L23RikQ8CC80 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
9130230L23RikQ8CC80 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.81■■□□□ 1.56
9130230L23RikQ8CC80 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
9130230L23RikQ8CC80 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
9130230L23RikQ8CC80 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
9130230L23RikQ8CC80 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.5■■□□□ 1.51
9130230L23RikQ8CC80 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
9130230L23RikQ8CC80 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
9130230L23RikQ8CC80 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
9130230L23RikQ8CC80 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
9130230L23RikQ8CC80 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
9130230L23RikQ8CC80 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.34■■□□□ 1.49
9130230L23RikQ8CC80 Gm27325-201ENSMUST00000175467 74 ntBASIC24.31■■□□□ 1.48
9130230L23RikQ8CC80 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.26■■□□□ 1.47
9130230L23RikQ8CC80 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
9130230L23RikQ8CC80 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
9130230L23RikQ8CC80 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.13■■□□□ 1.45
9130230L23RikQ8CC80 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
9130230L23RikQ8CC80 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
9130230L23RikQ8CC80 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.05■■□□□ 1.44
9130230L23RikQ8CC80 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.03■■□□□ 1.44
9130230L23RikQ8CC80 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
9130230L23RikQ8CC80 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
9130230L23RikQ8CC80 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
9130230L23RikQ8CC80 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
9130230L23RikQ8CC80 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.91■■□□□ 1.42
9130230L23RikQ8CC80 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
9130230L23RikQ8CC80 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
9130230L23RikQ8CC80 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
9130230L23RikQ8CC80 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
9130230L23RikQ8CC80 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
9130230L23RikQ8CC80 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
9130230L23RikQ8CC80 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
9130230L23RikQ8CC80 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
9130230L23RikQ8CC80 Rab21-202ENSMUST00000218831 843 ntBASIC23.77■■□□□ 1.4
9130230L23RikQ8CC80 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
9130230L23RikQ8CC80 Gm25262-201ENSMUST00000174934 133 ntBASIC23.72■■□□□ 1.39
9130230L23RikQ8CC80 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
9130230L23RikQ8CC80 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
9130230L23RikQ8CC80 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.67■■□□□ 1.38
9130230L23RikQ8CC80 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.67■■□□□ 1.38
9130230L23RikQ8CC80 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
9130230L23RikQ8CC80 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.61■■□□□ 1.37
9130230L23RikQ8CC80 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.56■■□□□ 1.36
9130230L23RikQ8CC80 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
9130230L23RikQ8CC80 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
9130230L23RikQ8CC80 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
9130230L23RikQ8CC80 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
9130230L23RikQ8CC80 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
9130230L23RikQ8CC80 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23.43■■□□□ 1.34
9130230L23RikQ8CC80 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
9130230L23RikQ8CC80 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
9130230L23RikQ8CC80 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.38■■□□□ 1.33
9130230L23RikQ8CC80 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC23.34■■□□□ 1.33
9130230L23RikQ8CC80 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
9130230L23RikQ8CC80 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
9130230L23RikQ8CC80 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
9130230L23RikQ8CC80 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
9130230L23RikQ8CC80 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC23.22■■□□□ 1.31
9130230L23RikQ8CC80 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
9130230L23RikQ8CC80 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
9130230L23RikQ8CC80 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
9130230L23RikQ8CC80 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms