Protein–RNA interactions for Protein: A0A075B5U7

Ighv1-22, Immunoglobulin heavy variable 1-22 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-22A0A075B5U7 Gm25239-201ENSMUST00000174915 86 ntBASIC29.54■■■□□ 2.32
Ighv1-22A0A075B5U7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Ighv1-22A0A075B5U7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Ighv1-22A0A075B5U7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ighv1-22A0A075B5U7 Gm15042-201ENSMUST00000120212 883 ntBASIC26.03■■□□□ 1.76
Ighv1-22A0A075B5U7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ighv1-22A0A075B5U7 Gm24109-201ENSMUST00000175489 103 ntBASIC25.46■■□□□ 1.67
Ighv1-22A0A075B5U7 Gm15045-201ENSMUST00000117359 883 ntBASIC25.43■■□□□ 1.66
Ighv1-22A0A075B5U7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ighv1-22A0A075B5U7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ighv1-22A0A075B5U7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ighv1-22A0A075B5U7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Ighv1-22A0A075B5U7 Gm23366-201ENSMUST00000175022 89 ntBASIC24.76■■□□□ 1.55
Ighv1-22A0A075B5U7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ighv1-22A0A075B5U7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ighv1-22A0A075B5U7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.41■■□□□ 1.5
Ighv1-22A0A075B5U7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ighv1-22A0A075B5U7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ighv1-22A0A075B5U7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ighv1-22A0A075B5U7 Psd-208ENSMUST00000224556 2034 ntBASIC24.18■■□□□ 1.46
Ighv1-22A0A075B5U7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ighv1-22A0A075B5U7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ighv1-22A0A075B5U7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Ighv1-22A0A075B5U7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ighv1-22A0A075B5U7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv1-22A0A075B5U7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ighv1-22A0A075B5U7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23.88■■□□□ 1.41
Ighv1-22A0A075B5U7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.85■■□□□ 1.41
Ighv1-22A0A075B5U7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ighv1-22A0A075B5U7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ighv1-22A0A075B5U7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.57■■□□□ 1.36
Ighv1-22A0A075B5U7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.52■■□□□ 1.36
Ighv1-22A0A075B5U7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-22A0A075B5U7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
Ighv1-22A0A075B5U7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ighv1-22A0A075B5U7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ighv1-22A0A075B5U7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-22A0A075B5U7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ighv1-22A0A075B5U7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.29■■□□□ 1.32
Ighv1-22A0A075B5U7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv1-22A0A075B5U7 Gm25238-201ENSMUST00000174914 89 ntBASIC23.22■■□□□ 1.31
Ighv1-22A0A075B5U7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ighv1-22A0A075B5U7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.14■■□□□ 1.29
Ighv1-22A0A075B5U7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ighv1-22A0A075B5U7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ighv1-22A0A075B5U7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ighv1-22A0A075B5U7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ighv1-22A0A075B5U7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ighv1-22A0A075B5U7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ighv1-22A0A075B5U7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
Ighv1-22A0A075B5U7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-22A0A075B5U7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.85■■□□□ 1.25
Ighv1-22A0A075B5U7 Gm27325-201ENSMUST00000175467 74 ntBASIC22.83■■□□□ 1.25
Ighv1-22A0A075B5U7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.83■■□□□ 1.24
Ighv1-22A0A075B5U7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ighv1-22A0A075B5U7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ighv1-22A0A075B5U7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ighv1-22A0A075B5U7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.65■■□□□ 1.22
Ighv1-22A0A075B5U7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.62■■□□□ 1.21
Ighv1-22A0A075B5U7 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.61■■□□□ 1.21
Ighv1-22A0A075B5U7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv1-22A0A075B5U7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.58■■□□□ 1.21
Ighv1-22A0A075B5U7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv1-22A0A075B5U7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ighv1-22A0A075B5U7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ighv1-22A0A075B5U7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Ighv1-22A0A075B5U7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Ighv1-22A0A075B5U7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-22A0A075B5U7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-22A0A075B5U7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ighv1-22A0A075B5U7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ighv1-22A0A075B5U7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ighv1-22A0A075B5U7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv1-22A0A075B5U7 Rab21-202ENSMUST00000218831 843 ntBASIC22.32■■□□□ 1.16
Ighv1-22A0A075B5U7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.3■■□□□ 1.16
Ighv1-22A0A075B5U7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv1-22A0A075B5U7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.24■■□□□ 1.15
Ighv1-22A0A075B5U7 Gm25262-201ENSMUST00000174934 133 ntBASIC22.23■■□□□ 1.15
Ighv1-22A0A075B5U7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ighv1-22A0A075B5U7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.23■■□□□ 1.15
Ighv1-22A0A075B5U7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ighv1-22A0A075B5U7 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.18■■□□□ 1.14
Ighv1-22A0A075B5U7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ighv1-22A0A075B5U7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-22A0A075B5U7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv1-22A0A075B5U7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ighv1-22A0A075B5U7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ighv1-22A0A075B5U7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ighv1-22A0A075B5U7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv1-22A0A075B5U7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.94■■□□□ 1.1
Ighv1-22A0A075B5U7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv1-22A0A075B5U7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.91■■□□□ 1.1
Ighv1-22A0A075B5U7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ighv1-22A0A075B5U7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.85■■□□□ 1.09
Ighv1-22A0A075B5U7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.84■■□□□ 1.09
Ighv1-22A0A075B5U7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Ighv1-22A0A075B5U7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-22A0A075B5U7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ighv1-22A0A075B5U7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ighv1-22A0A075B5U7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms