Protein–RNA interactions for Protein: P06327

Gm5629, Ig heavy chain V region VH558 A1/A4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5629P06327 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Gm5629P06327 Gm25239-201ENSMUST00000174915 86 ntBASIC24.52■■□□□ 1.52
Gm5629P06327 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Gm5629P06327 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Gm5629P06327 Psd-208ENSMUST00000224556 2034 ntBASIC23.33■■□□□ 1.32
Gm5629P06327 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Gm5629P06327 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Gm5629P06327 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm5629P06327 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm5629P06327 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5629P06327 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Gm5629P06327 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm5629P06327 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm5629P06327 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Gm5629P06327 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Gm5629P06327 Gm15042-201ENSMUST00000120212 883 ntBASIC22.15■■□□□ 1.14
Gm5629P06327 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.02■■□□□ 1.12
Gm5629P06327 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm5629P06327 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Gm5629P06327 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Gm5629P06327 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Gm5629P06327 Gm15045-201ENSMUST00000117359 883 ntBASIC21.75■■□□□ 1.07
Gm5629P06327 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Gm5629P06327 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Gm5629P06327 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Gm5629P06327 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gm5629P06327 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gm5629P06327 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.37■■□□□ 1.01
Gm5629P06327 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gm5629P06327 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gm5629P06327 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm5629P06327 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.29■■□□□ 1
Gm5629P06327 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gm5629P06327 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.23■□□□□ 0.99
Gm5629P06327 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm5629P06327 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5629P06327 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm5629P06327 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm5629P06327 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.03■□□□□ 0.96
Gm5629P06327 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm5629P06327 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.99■□□□□ 0.95
Gm5629P06327 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm5629P06327 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.96■□□□□ 0.95
Gm5629P06327 Gm42596-201ENSMUST00000196305 1958 ntBASIC20.94■□□□□ 0.94
Gm5629P06327 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm5629P06327 Gm24109-201ENSMUST00000175489 103 ntBASIC20.91■□□□□ 0.94
Gm5629P06327 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm5629P06327 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm5629P06327 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Gm5629P06327 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Gm5629P06327 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm5629P06327 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5629P06327 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5629P06327 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5629P06327 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5629P06327 Gm23366-201ENSMUST00000175022 89 ntBASIC20.61■□□□□ 0.89
Gm5629P06327 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm5629P06327 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gm5629P06327 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm5629P06327 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm5629P06327 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm5629P06327 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5629P06327 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.38■□□□□ 0.85
Gm5629P06327 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm5629P06327 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5629P06327 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5629P06327 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Gm5629P06327 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5629P06327 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.32■□□□□ 0.84
Gm5629P06327 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm5629P06327 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5629P06327 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm5629P06327 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm5629P06327 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm5629P06327 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm5629P06327 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm5629P06327 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm5629P06327 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gm5629P06327 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm5629P06327 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm5629P06327 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm5629P06327 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gm5629P06327 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Gm5629P06327 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Gm5629P06327 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm5629P06327 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gm5629P06327 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm5629P06327 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm5629P06327 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm5629P06327 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5629P06327 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm5629P06327 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm5629P06327 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm5629P06327 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.73■□□□□ 0.75
Gm5629P06327 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5629P06327 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm5629P06327 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5629P06327 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm5629P06327 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Gm5629P06327 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms