Protein–RNA interactions for Protein: A0A0B4J1I8

Igkv4-59, Immunoglobulin kappa variable 4-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-59A0A0B4J1I8 Gm25239-201ENSMUST00000174915 86 ntBASIC27.37■■□□□ 1.97
Igkv4-59A0A0B4J1I8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Igkv4-59A0A0B4J1I8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Igkv4-59A0A0B4J1I8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Igkv4-59A0A0B4J1I8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv4-59A0A0B4J1I8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Igkv4-59A0A0B4J1I8 Gm15042-201ENSMUST00000120212 883 ntBASIC24.45■■□□□ 1.5
Igkv4-59A0A0B4J1I8 Psd-208ENSMUST00000224556 2034 ntBASIC24.44■■□□□ 1.5
Igkv4-59A0A0B4J1I8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv4-59A0A0B4J1I8 Gm15045-201ENSMUST00000117359 883 ntBASIC24■■□□□ 1.43
Igkv4-59A0A0B4J1I8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Igkv4-59A0A0B4J1I8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Igkv4-59A0A0B4J1I8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.76■■□□□ 1.39
Igkv4-59A0A0B4J1I8 Gm24109-201ENSMUST00000175489 103 ntBASIC23.52■■□□□ 1.36
Igkv4-59A0A0B4J1I8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv4-59A0A0B4J1I8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv4-59A0A0B4J1I8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Igkv4-59A0A0B4J1I8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Igkv4-59A0A0B4J1I8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Igkv4-59A0A0B4J1I8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Igkv4-59A0A0B4J1I8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Igkv4-59A0A0B4J1I8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv4-59A0A0B4J1I8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv4-59A0A0B4J1I8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Igkv4-59A0A0B4J1I8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.12■■□□□ 1.29
Igkv4-59A0A0B4J1I8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Igkv4-59A0A0B4J1I8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Igkv4-59A0A0B4J1I8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv4-59A0A0B4J1I8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Igkv4-59A0A0B4J1I8 Gm23366-201ENSMUST00000175022 89 ntBASIC22.92■■□□□ 1.26
Igkv4-59A0A0B4J1I8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Igkv4-59A0A0B4J1I8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.89■■□□□ 1.25
Igkv4-59A0A0B4J1I8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Igkv4-59A0A0B4J1I8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Igkv4-59A0A0B4J1I8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Igkv4-59A0A0B4J1I8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv4-59A0A0B4J1I8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Igkv4-59A0A0B4J1I8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv4-59A0A0B4J1I8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv4-59A0A0B4J1I8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv4-59A0A0B4J1I8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.49■■□□□ 1.19
Igkv4-59A0A0B4J1I8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.44■■□□□ 1.18
Igkv4-59A0A0B4J1I8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Igkv4-59A0A0B4J1I8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.4■■□□□ 1.18
Igkv4-59A0A0B4J1I8 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.35■■□□□ 1.17
Igkv4-59A0A0B4J1I8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Igkv4-59A0A0B4J1I8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Igkv4-59A0A0B4J1I8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv4-59A0A0B4J1I8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv4-59A0A0B4J1I8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Igkv4-59A0A0B4J1I8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv4-59A0A0B4J1I8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Igkv4-59A0A0B4J1I8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Igkv4-59A0A0B4J1I8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Igkv4-59A0A0B4J1I8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.83■■□□□ 1.09
Igkv4-59A0A0B4J1I8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Igkv4-59A0A0B4J1I8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Igkv4-59A0A0B4J1I8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.77■■□□□ 1.08
Igkv4-59A0A0B4J1I8 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.73■■□□□ 1.07
Igkv4-59A0A0B4J1I8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Igkv4-59A0A0B4J1I8 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.69■■□□□ 1.06
Igkv4-59A0A0B4J1I8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Igkv4-59A0A0B4J1I8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Igkv4-59A0A0B4J1I8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Igkv4-59A0A0B4J1I8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Igkv4-59A0A0B4J1I8 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Igkv4-59A0A0B4J1I8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Igkv4-59A0A0B4J1I8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Igkv4-59A0A0B4J1I8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Igkv4-59A0A0B4J1I8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.53■■□□□ 1.04
Igkv4-59A0A0B4J1I8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Igkv4-59A0A0B4J1I8 Gm27325-201ENSMUST00000175467 74 ntBASIC21.51■■□□□ 1.03
Igkv4-59A0A0B4J1I8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Igkv4-59A0A0B4J1I8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Igkv4-59A0A0B4J1I8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Gm25238-201ENSMUST00000174914 89 ntBASIC21.43■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Igkv4-59A0A0B4J1I8 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Igkv4-59A0A0B4J1I8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Igkv4-59A0A0B4J1I8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.35■■□□□ 1.01
Igkv4-59A0A0B4J1I8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Igkv4-59A0A0B4J1I8 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.27■■□□□ 1
Igkv4-59A0A0B4J1I8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igkv4-59A0A0B4J1I8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv4-59A0A0B4J1I8 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igkv4-59A0A0B4J1I8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-59A0A0B4J1I8 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igkv4-59A0A0B4J1I8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igkv4-59A0A0B4J1I8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Igkv4-59A0A0B4J1I8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Igkv4-59A0A0B4J1I8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Igkv4-59A0A0B4J1I8 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igkv4-59A0A0B4J1I8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Igkv4-59A0A0B4J1I8 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Igkv4-59A0A0B4J1I8 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.08■□□□□ 0.97
Igkv4-59A0A0B4J1I8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms