RNA–Protein interactions for RNA: ENST00000630607.2

UBE3A-221, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-221ENST00000630607 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
UBE3A-221ENST00000630607 DNAH17Q9UFH2 4485 aa4.29□□□□□ -1.72
UBE3A-221ENST00000630607 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
UBE3A-221ENST00000630607 MGAM2Q2M2H8 2515 aa4.26□□□□□ -1.73
UBE3A-221ENST00000630607 LINC00304Q8N9R0 145 aa4.26□□□□□ -1.73
UBE3A-221ENST00000630607 FBN1P35555 2871 aaKnown RBP4.26□□□□□ -1.73
UBE3A-221ENST00000630607 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
UBE3A-221ENST00000630607 KRTAP10-8P60410 259 aa4.22□□□□□ -1.73
UBE3A-221ENST00000630607 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
UBE3A-221ENST00000630607 HECTD4Q9Y4D8 3996 aa4.22□□□□□ -1.73
UBE3A-221ENST00000630607 LY6G6CO95867 125 aa4.22□□□□□ -1.73
UBE3A-221ENST00000630607 Q6ZSA8 131 aa4.2□□□□□ -1.74
UBE3A-221ENST00000630607 SPINK1P00995 79 aa4.2□□□□□ -1.74
UBE3A-221ENST00000630607 INE1O15225 51 aa4.19□□□□□ -1.74
UBE3A-221ENST00000630607 COL7A1Q02388 2944 aa4.19□□□□□ -1.74
UBE3A-221ENST00000630607 PRKDCP78527 4128 aaKnown RBP4.19□□□□□ -1.74
UBE3A-221ENST00000630607 DNAH7Q8WXX0 4024 aa4.19□□□□□ -1.74
UBE3A-221ENST00000630607 CSMD3Q7Z407 3707 aa4.18□□□□□ -1.74
UBE3A-221ENST00000630607 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
UBE3A-221ENST00000630607 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
UBE3A-221ENST00000630607 FRAS1Q86XX4 4008 aa4.16□□□□□ -1.74
UBE3A-221ENST00000630607 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
UBE3A-221ENST00000630607 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
UBE3A-221ENST00000630607 MEGF8Q7Z7M0 2845 aa4.09□□□□□ -1.75
UBE3A-221ENST00000630607 H0YAA0 97 aa4.09□□□□□ -1.75
UBE3A-221ENST00000630607 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
UBE3A-221ENST00000630607 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
UBE3A-221ENST00000630607 KRTAP10-1P60331 282 aa4.07□□□□□ -1.76
UBE3A-221ENST00000630607 TGP01266 2768 aa4.06□□□□□ -1.76
UBE3A-221ENST00000630607 KMT2AQ03164 3969 aa4.05□□□□□ -1.76
UBE3A-221ENST00000630607 FBN3Q75N90 2809 aa4.05□□□□□ -1.76
UBE3A-221ENST00000630607 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
UBE3A-221ENST00000630607 LRP1BQ9NZR2 4599 aa4.02□□□□□ -1.77
UBE3A-221ENST00000630607 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
UBE3A-221ENST00000630607 PKD1P98161 4303 aa3.97□□□□□ -1.77
UBE3A-221ENST00000630607 VPS13BQ7Z7G8 4022 aa3.97□□□□□ -1.77
UBE3A-221ENST00000630607 FAT2Q9NYQ8 4349 aa3.96□□□□□ -1.78
UBE3A-221ENST00000630607 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
UBE3A-221ENST00000630607 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
UBE3A-221ENST00000630607 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
UBE3A-221ENST00000630607 RPL37P61927 97 aaKnown RBP3.94□□□□□ -1.78
UBE3A-221ENST00000630607 C9orf92A6NGG3 77 aa3.9□□□□□ -1.78
UBE3A-221ENST00000630607 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
UBE3A-221ENST00000630607 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
UBE3A-221ENST00000630607 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
UBE3A-221ENST00000630607 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
UBE3A-221ENST00000630607 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
UBE3A-221ENST00000630607 PKHD1P08F94 4074 aa3.84□□□□□ -1.8
UBE3A-221ENST00000630607 S4R3F8 94 aa3.82□□□□□ -1.8
UBE3A-221ENST00000630607 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
UBE3A-221ENST00000630607 SPRR5A0A1B0GTR4 108 aa3.8□□□□□ -1.8
UBE3A-221ENST00000630607 A0A1B0GVY2 172 aa3.8□□□□□ -1.8
UBE3A-221ENST00000630607 PLAC4Q8WY50 150 aa3.79□□□□□ -1.8
UBE3A-221ENST00000630607 CRIPTQ9P021 101 aa3.79□□□□□ -1.8
UBE3A-221ENST00000630607 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
UBE3A-221ENST00000630607 M0QZ58 72 aa3.77□□□□□ -1.81
UBE3A-221ENST00000630607 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
UBE3A-221ENST00000630607 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
UBE3A-221ENST00000630607 TNXBP22105 4242 aa3.75□□□□□ -1.81
UBE3A-221ENST00000630607 A0A0D9SG42 100 aa3.74□□□□□ -1.81
UBE3A-221ENST00000630607 KRTAP12-2P59991 146 aa3.74□□□□□ -1.81
UBE3A-221ENST00000630607 KRTAP21-3Q3LHN1 58 aa3.74□□□□□ -1.81
UBE3A-221ENST00000630607 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
UBE3A-221ENST00000630607 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
UBE3A-221ENST00000630607 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
UBE3A-221ENST00000630607 FAT1Q14517 4588 aa3.72□□□□□ -1.81
UBE3A-221ENST00000630607 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
UBE3A-221ENST00000630607 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
UBE3A-221ENST00000630607 HSPG2P98160 4391 aa3.7□□□□□ -1.82
UBE3A-221ENST00000630607 DNHD1Q96M86 4753 aa3.7□□□□□ -1.82
UBE3A-221ENST00000630607 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
UBE3A-221ENST00000630607 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
UBE3A-221ENST00000630607 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
UBE3A-221ENST00000630607 Q5VSD8 79 aa3.6□□□□□ -1.83
UBE3A-221ENST00000630607 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
UBE3A-221ENST00000630607 KRTAP5-11Q6L8G4 156 aa3.56□□□□□ -1.84
UBE3A-221ENST00000630607 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
UBE3A-221ENST00000630607 RYR2Q92736 4967 aa3.53□□□□□ -1.84
UBE3A-221ENST00000630607 MYCBP2O75592 4640 aa3.52□□□□□ -1.85
UBE3A-221ENST00000630607 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
UBE3A-221ENST00000630607 RYR1P21817 5038 aa3.46□□□□□ -1.86
UBE3A-221ENST00000630607 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
UBE3A-221ENST00000630607 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
UBE3A-221ENST00000630607 LRP2P98164 4655 aa3.4□□□□□ -1.87
UBE3A-221ENST00000630607 LPAP08519 4548 aa3.37□□□□□ -1.87
UBE3A-221ENST00000630607 MUC17Q685J3 4493 aa3.34□□□□□ -1.87
UBE3A-221ENST00000630607 TNP1P09430 55 aa3.33□□□□□ -1.88
UBE3A-221ENST00000630607 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
UBE3A-221ENST00000630607 RYR3Q15413 4870 aa3.32□□□□□ -1.88
UBE3A-221ENST00000630607 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
UBE3A-221ENST00000630607 KIAA1109Q2LD37 5005 aa3.29□□□□□ -1.88
UBE3A-221ENST00000630607 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
UBE3A-221ENST00000630607 KRTAP4-1Q9BYQ7 146 aa3.26□□□□□ -1.89
UBE3A-221ENST00000630607 HERC1Q15751 4861 aa3.23□□□□□ -1.89
UBE3A-221ENST00000630607 FLGP20930 4061 aaPredicted RBP3.22□□□□□ -1.89
UBE3A-221ENST00000630607 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
UBE3A-221ENST00000630607 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
UBE3A-221ENST00000630607 SPRR2GQ9BYE4 73 aa3.18□□□□□ -1.9
UBE3A-221ENST00000630607 ABCA13Q86UQ4 5058 aa3.16□□□□□ -1.9
UBE3A-221ENST00000630607 KRTAP5-9P26371 169 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms