RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 VPS13DQ5THJ4 4388 aa6.79□□□□□ -1.32
RPS6KC1-208ENST00000614059 KRTAP21-3Q3LHN1 58 aa6.78□□□□□ -1.32
RPS6KC1-208ENST00000614059 FRAS1Q86XX4 4008 aa6.78□□□□□ -1.32
RPS6KC1-208ENST00000614059 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
RPS6KC1-208ENST00000614059 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
RPS6KC1-208ENST00000614059 PRKDCP78527 4128 aaKnown RBP6.7□□□□□ -1.34
RPS6KC1-208ENST00000614059 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
RPS6KC1-208ENST00000614059 LRP1BQ9NZR2 4599 aa6.66□□□□□ -1.34
RPS6KC1-208ENST00000614059 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
RPS6KC1-208ENST00000614059 DNAH6Q9C0G6 4158 aa6.58□□□□□ -1.36
RPS6KC1-208ENST00000614059 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
RPS6KC1-208ENST00000614059 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
RPS6KC1-208ENST00000614059 ALMS1Q8TCU4 4167 aa6.57□□□□□ -1.36
RPS6KC1-208ENST00000614059 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
RPS6KC1-208ENST00000614059 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
RPS6KC1-208ENST00000614059 DNHD1Q96M86 4753 aa6.5□□□□□ -1.37
RPS6KC1-208ENST00000614059 FAT1Q14517 4588 aa6.48□□□□□ -1.37
RPS6KC1-208ENST00000614059 VPS13BQ7Z7G8 4022 aa6.48□□□□□ -1.37
RPS6KC1-208ENST00000614059 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
RPS6KC1-208ENST00000614059 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
RPS6KC1-208ENST00000614059 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
RPS6KC1-208ENST00000614059 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
RPS6KC1-208ENST00000614059 DYNC1H1Q14204 4646 aaKnown RBP6.38□□□□□ -1.39
RPS6KC1-208ENST00000614059 HYDINQ4G0P3 5121 aa6.33□□□□□ -1.4
RPS6KC1-208ENST00000614059 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
RPS6KC1-208ENST00000614059 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
RPS6KC1-208ENST00000614059 LORP23490 312 aaPredicted RBP6.24□□□□□ -1.41
RPS6KC1-208ENST00000614059 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
RPS6KC1-208ENST00000614059 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
RPS6KC1-208ENST00000614059 FAT2Q9NYQ8 4349 aa6.18□□□□□ -1.42
RPS6KC1-208ENST00000614059 PKD1P98161 4303 aa6.16□□□□□ -1.42
RPS6KC1-208ENST00000614059 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
RPS6KC1-208ENST00000614059 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
RPS6KC1-208ENST00000614059 FAT3Q8TDW7 4589 aa6□□□□□ -1.45
RPS6KC1-208ENST00000614059 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
RPS6KC1-208ENST00000614059 LCE3AQ5TA76 89 aa5.96□□□□□ -1.45
RPS6KC1-208ENST00000614059 RYR1P21817 5038 aa5.95□□□□□ -1.46
RPS6KC1-208ENST00000614059 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
RPS6KC1-208ENST00000614059 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
RPS6KC1-208ENST00000614059 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
RPS6KC1-208ENST00000614059 HSPG2P98160 4391 aa5.9□□□□□ -1.46
RPS6KC1-208ENST00000614059 INE1O15225 51 aa5.89□□□□□ -1.47
RPS6KC1-208ENST00000614059 KRTAP17-1Q9BYP8 105 aa5.88□□□□□ -1.47
RPS6KC1-208ENST00000614059 LRP2P98164 4655 aa5.87□□□□□ -1.47
RPS6KC1-208ENST00000614059 RYR2Q92736 4967 aa5.87□□□□□ -1.47
RPS6KC1-208ENST00000614059 RYR3Q15413 4870 aa5.85□□□□□ -1.47
RPS6KC1-208ENST00000614059 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
RPS6KC1-208ENST00000614059 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
RPS6KC1-208ENST00000614059 KMT2CQ8NEZ4 4911 aaKnown RBP5.83□□□□□ -1.48
RPS6KC1-208ENST00000614059 TNXBP22105 4242 aa5.74□□□□□ -1.49
RPS6KC1-208ENST00000614059 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
RPS6KC1-208ENST00000614059 LPAP08519 4548 aa5.69□□□□□ -1.5
RPS6KC1-208ENST00000614059 KRTAP10-5P60370 271 aa5.52□□□□□ -1.53
RPS6KC1-208ENST00000614059 MT2AP02795 61 aa5.48□□□□□ -1.53
RPS6KC1-208ENST00000614059 MT1HP80294 61 aa5.46□□□□□ -1.54
RPS6KC1-208ENST00000614059 SPRR2GQ9BYE4 73 aa5.45□□□□□ -1.54
RPS6KC1-208ENST00000614059 ABCA13Q86UQ4 5058 aa5.44□□□□□ -1.54
RPS6KC1-208ENST00000614059 MT1FP04733 61 aa5.43□□□□□ -1.54
RPS6KC1-208ENST00000614059 EPPK1P58107 5090 aaKnown RBP5.43□□□□□ -1.54
RPS6KC1-208ENST00000614059 HERC2O95714 4834 aa5.42□□□□□ -1.54
RPS6KC1-208ENST00000614059 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
RPS6KC1-208ENST00000614059 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
RPS6KC1-208ENST00000614059 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
RPS6KC1-208ENST00000614059 KRTAP19-1Q8IUB9 90 aa5.29□□□□□ -1.56
RPS6KC1-208ENST00000614059 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
RPS6KC1-208ENST00000614059 MUC2Q02817 5179 aa5.27□□□□□ -1.57
RPS6KC1-208ENST00000614059 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
RPS6KC1-208ENST00000614059 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
RPS6KC1-208ENST00000614059 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
RPS6KC1-208ENST00000614059 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
RPS6KC1-208ENST00000614059 FLGP20930 4061 aaPredicted RBP5.18□□□□□ -1.58
RPS6KC1-208ENST00000614059 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
RPS6KC1-208ENST00000614059 HERC1Q15751 4861 aa5.09□□□□□ -1.6
RPS6KC1-208ENST00000614059 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
RPS6KC1-208ENST00000614059 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
RPS6KC1-208ENST00000614059 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
RPS6KC1-208ENST00000614059 MT1XP80297 61 aa5.07□□□□□ -1.6
RPS6KC1-208ENST00000614059 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
RPS6KC1-208ENST00000614059 BIRC6Q9NR09 4857 aa5.04□□□□□ -1.6
RPS6KC1-208ENST00000614059 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
RPS6KC1-208ENST00000614059 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
RPS6KC1-208ENST00000614059 MT1BP07438 61 aa5.01□□□□□ -1.61
RPS6KC1-208ENST00000614059 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
RPS6KC1-208ENST00000614059 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
RPS6KC1-208ENST00000614059 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
RPS6KC1-208ENST00000614059 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
RPS6KC1-208ENST00000614059 RNF213Q63HN8 5207 aa4.96□□□□□ -1.62
RPS6KC1-208ENST00000614059 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
RPS6KC1-208ENST00000614059 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
RPS6KC1-208ENST00000614059 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
RPS6KC1-208ENST00000614059 MT1GP13640 62 aa4.85□□□□□ -1.63
RPS6KC1-208ENST00000614059 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
RPS6KC1-208ENST00000614059 KRTAP9-3Q9BYQ3 159 aa4.78□□□□□ -1.64
RPS6KC1-208ENST00000614059 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
RPS6KC1-208ENST00000614059 LCE2BO14633 110 aa4.64□□□□□ -1.67
RPS6KC1-208ENST00000614059 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.68
RPS6KC1-208ENST00000614059 MT1LQ93083 61 aa4.55□□□□□ -1.68
RPS6KC1-208ENST00000614059 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
RPS6KC1-208ENST00000614059 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
RPS6KC1-208ENST00000614059 SPRR2EP22531 72 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms