RNA–Protein interactions for RNA: ENST00000614059.4

RPS6KC1-208, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-208ENST00000614059 SPRR2BP35325 72 aa4.5□□□□□ -1.69
RPS6KC1-208ENST00000614059 SPRR2AP35326 72 aa4.5□□□□□ -1.69
RPS6KC1-208ENST00000614059 MT1EP04732 61 aa4.49□□□□□ -1.69
RPS6KC1-208ENST00000614059 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
RPS6KC1-208ENST00000614059 KMT2DO14686 5537 aa4.48□□□□□ -1.69
RPS6KC1-208ENST00000614059 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
RPS6KC1-208ENST00000614059 USH2AO75445 5202 aa4.47□□□□□ -1.69
RPS6KC1-208ENST00000614059 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
RPS6KC1-208ENST00000614059 KRTAP19-3Q7Z4W3 81 aa4.44□□□□□ -1.7
RPS6KC1-208ENST00000614059 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
RPS6KC1-208ENST00000614059 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.72
RPS6KC1-208ENST00000614059 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
RPS6KC1-208ENST00000614059 MT1MQ8N339 61 aa4.32□□□□□ -1.72
RPS6KC1-208ENST00000614059 SPRR2DP22532 72 aa4.31□□□□□ -1.72
RPS6KC1-208ENST00000614059 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
RPS6KC1-208ENST00000614059 PRM1P04553 51 aa4.26□□□□□ -1.73
RPS6KC1-208ENST00000614059 LCE2AQ5TA79 106 aaPredicted RBP4.21□□□□□ -1.74
RPS6KC1-208ENST00000614059 KRTAP2-3P0C7H8 128 aa4.19□□□□□ -1.74
RPS6KC1-208ENST00000614059 KRTAP2-4Q9BYR9 128 aa4.19□□□□□ -1.74
RPS6KC1-208ENST00000614059 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
RPS6KC1-208ENST00000614059 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
RPS6KC1-208ENST00000614059 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
RPS6KC1-208ENST00000614059 MT3P25713 68 aa4.05□□□□□ -1.76
RPS6KC1-208ENST00000614059 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
RPS6KC1-208ENST00000614059 MT4P47944 62 aa4□□□□□ -1.77
RPS6KC1-208ENST00000614059 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
RPS6KC1-208ENST00000614059 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
RPS6KC1-208ENST00000614059 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
RPS6KC1-208ENST00000614059 MT1AP04731 61 aa3.95□□□□□ -1.78
RPS6KC1-208ENST00000614059 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
RPS6KC1-208ENST00000614059 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
RPS6KC1-208ENST00000614059 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.79
RPS6KC1-208ENST00000614059 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
RPS6KC1-208ENST00000614059 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
RPS6KC1-208ENST00000614059 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
RPS6KC1-208ENST00000614059 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
RPS6KC1-208ENST00000614059 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
RPS6KC1-208ENST00000614059 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
RPS6KC1-208ENST00000614059 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
RPS6KC1-208ENST00000614059 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
RPS6KC1-208ENST00000614059 KRTAP9-6A0A140TA67 174 aa3.38□□□□□ -1.87
RPS6KC1-208ENST00000614059 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
RPS6KC1-208ENST00000614059 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
RPS6KC1-208ENST00000614059 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
RPS6KC1-208ENST00000614059 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
RPS6KC1-208ENST00000614059 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
RPS6KC1-208ENST00000614059 LCE4AQ5TA78 99 aa3.2□□□□□ -1.9
RPS6KC1-208ENST00000614059 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
RPS6KC1-208ENST00000614059 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
RPS6KC1-208ENST00000614059 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
RPS6KC1-208ENST00000614059 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
RPS6KC1-208ENST00000614059 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
RPS6KC1-208ENST00000614059 NEBP20929 6669 aa3.13□□□□□ -1.91
RPS6KC1-208ENST00000614059 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
RPS6KC1-208ENST00000614059 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
RPS6KC1-208ENST00000614059 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
RPS6KC1-208ENST00000614059 KRTAP20-2Q3LI61 65 aa2.97□□□□□ -1.93
RPS6KC1-208ENST00000614059 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
RPS6KC1-208ENST00000614059 KRTAP4-12Q9BQ66 201 aa2.8□□□□□ -1.96
RPS6KC1-208ENST00000614059 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
RPS6KC1-208ENST00000614059 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
RPS6KC1-208ENST00000614059 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
RPS6KC1-208ENST00000614059 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
RPS6KC1-208ENST00000614059 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
RPS6KC1-208ENST00000614059 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
RPS6KC1-208ENST00000614059 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
RPS6KC1-208ENST00000614059 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
RPS6KC1-208ENST00000614059 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
RPS6KC1-208ENST00000614059 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
RPS6KC1-208ENST00000614059 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
RPS6KC1-208ENST00000614059 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
RPS6KC1-208ENST00000614059 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
RPS6KC1-208ENST00000614059 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
RPS6KC1-208ENST00000614059 KRTAP5-11Q6L8G4 156 aa1.98□□□□□ -2.09
RPS6KC1-208ENST00000614059 KRTAP5-7Q6L8G8 165 aa1.82□□□□□ -2.12
RPS6KC1-208ENST00000614059 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
RPS6KC1-208ENST00000614059 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms