RNA–Protein interactions for RNA: ENST00000517280.1

RNU1-104P-201, Transcript of RNA, U1 small nuclear 104, pseudogene, humanhuman

BASIC

Gene RNU1-104P, Length 175 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-104P-201ENST00000517280 CHD9Q3L8U1 2897 aa0.76□□□□□ -2.29
RNU1-104P-201ENST00000517280 NF1P21359 2839 aa0.76□□□□□ -2.29
RNU1-104P-201ENST00000517280 USP24Q9UPU5 2620 aa0.76□□□□□ -2.29
RNU1-104P-201ENST00000517280 ACANP16112 2415 aa0.76□□□□□ -2.29
RNU1-104P-201ENST00000517280 HELZ2Q9BYK8 2649 aaKnown RBP0.76□□□□□ -2.29
RNU1-104P-201ENST00000517280 DNAH6Q9C0G6 4158 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 DNAH5Q8TE73 4624 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 PTPN13Q12923 2485 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 PKD1P98161 4303 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 ATMQ13315 3056 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 USP9YO00507 2555 aaPredicted RBP0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 COL12A1Q99715 3063 aa0.75□□□□□ -2.29
RNU1-104P-201ENST00000517280 NIPBLQ6KC79 2804 aaeCLIP0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 UTP20O75691 2785 aaKnown RBP0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 TNXBP22105 4242 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 ZZEF1O43149 2961 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 CFAP47Q6ZTR5 3102 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 BOD1L1Q8NFC6 3051 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 FRYQ5TBA9 3013 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 COL7A1Q02388 2944 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 NBEAQ8NFP9 2946 aa0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 MAP1AP78559 2803 aaPredicted RBP0.74□□□□□ -2.29
RNU1-104P-201ENST00000517280 DYNC1H1Q14204 4646 aaKnown RBP0.73□□□□□ -2.29
RNU1-104P-201ENST00000517280 LAMA3Q16787 3333 aa0.73□□□□□ -2.29
RNU1-104P-201ENST00000517280 ZFYVE26Q68DK2 2539 aa0.73□□□□□ -2.29
RNU1-104P-201ENST00000517280 PRM1P04553 51 aa0.73□□□□□ -2.29
RNU1-104P-201ENST00000517280 DCHS1Q96JQ0 3298 aa0.73□□□□□ -2.29
RNU1-104P-201ENST00000517280 FREM2Q5SZK8 3169 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 CACNA1AO00555 2505 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 MTORP42345 2549 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 DCHS2Q6V1P9 2916 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 FAT1Q14517 4588 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 APCP25054 2843 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 PCNTO95613 3336 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 MUC3AQ02505 3323 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 WDFY3Q8IZQ1 3526 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 SPG11Q96JI7 2443 aa0.72□□□□□ -2.29
RNU1-104P-201ENST00000517280 DNAH12Q6ZR08 3092 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 STAB1Q9NY15 2570 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 DMXL1Q9Y485 3027 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 FLNCQ14315 2725 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 XIRP2A4UGR9 3374 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 VPS13CQ709C8 3753 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 TEX15Q9BXT5 2789 aa0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 GCN1Q92616 2671 aaKnown RBP0.71□□□□□ -2.3
RNU1-104P-201ENST00000517280 LRP1Q07954 4544 aaKnown RBP0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 MUC17Q685J3 4493 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 LPAP08519 4548 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 ITPR3Q14573 2671 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 CENPFP49454 3210 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 TGP01266 2768 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 CSMD2Q7Z408 3487 aa0.7□□□□□ -2.3
RNU1-104P-201ENST00000517280 LRBAP50851 2863 aa0.69□□□□□ -2.3
RNU1-104P-201ENST00000517280 NSD1Q96L73 2696 aaPredicted RBP0.69□□□□□ -2.3
RNU1-104P-201ENST00000517280 SMR3BP02814 79 aaPredicted RBP0.69□□□□□ -2.3
RNU1-104P-201ENST00000517280 CFAP46Q8IYW2 2715 aa0.69□□□□□ -2.3
RNU1-104P-201ENST00000517280 PDZD2O15018 2839 aa0.69□□□□□ -2.3
RNU1-104P-201ENST00000517280 LOC400499M0QZD8 3231 aa0.68□□□□□ -2.3
RNU1-104P-201ENST00000517280 PKHD1P08F94 4074 aa0.68□□□□□ -2.3
RNU1-104P-201ENST00000517280 MYO15AQ9UKN7 3530 aa0.68□□□□□ -2.3
RNU1-104P-201ENST00000517280 DOPEY1Q5JWR5 2465 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 EP400Q96L91 3159 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 STAB2Q8WWQ8 2551 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 ACACBO00763 2458 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 ITPR2Q14571 2701 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 FBN3Q75N90 2809 aa0.67□□□□□ -2.3
RNU1-104P-201ENST00000517280 KALRNO60229 2985 aa0.66□□□□□ -2.3
RNU1-104P-201ENST00000517280 TACC2O95359 2948 aa0.66□□□□□ -2.3
RNU1-104P-201ENST00000517280 SETXQ7Z333 2677 aaKnown RBP0.66□□□□□ -2.3
RNU1-104P-201ENST00000517280 MYO18BQ8IUG5 2567 aa0.65□□□□□ -2.3
RNU1-104P-201ENST00000517280 BRCA2P51587 3418 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 TEP1Q99973 2627 aaKnown RBP0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 VCANP13611 3396 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 TLN2Q9Y4G6 2542 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 UNC80Q8N2C7 3258 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 HIVEP1P15822 2718 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 FBN2P35556 2912 aa0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
RNU1-104P-201ENST00000517280 SPTAN1Q13813 2472 aaKnown RBP0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 TLN1Q9Y490 2541 aaKnown RBP0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 FLNAP21333 2647 aaKnown RBP0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 UNC79Q9P2D8 2635 aa0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 USP9XQ93008 2570 aaPredicted RBP0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 NBEAL2Q6ZNJ1 2754 aa0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 ZANQ9Y493 2812 aa0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 CENPEQ02224 2701 aa0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 FASNP49327 2511 aaKnown RBP0.64□□□□□ -2.31
RNU1-104P-201ENST00000517280 NBEAL1Q6ZS30 2694 aa0.63□□□□□ -2.31
RNU1-104P-201ENST00000517280 HERC1Q15751 4861 aa0.63□□□□□ -2.31
RNU1-104P-201ENST00000517280 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 LAMA1P25391 3075 aa0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 LAMA2P24043 3122 aaKnown RBP0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 MT1AP04731 61 aa0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 CDH23Q9H251 3354 aa0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 FLNBO75369 2602 aaKnown RBP0.62□□□□□ -2.31
RNU1-104P-201ENST00000517280 NOTCH1P46531 2555 aa0.61□□□□□ -2.31
RNU1-104P-201ENST00000517280 LRP2P98164 4655 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms