RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 TLN1Q9Y490 2541 aaKnown RBP0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 TEX15Q9BXT5 2789 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 KRTAP6-2Q3LI66 62 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 TMEM167AQ8TBQ9 72 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 FRYQ5TBA9 3013 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 RANBP2P49792 3224 aaKnown RBP0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MYO9AB2RTY4 2548 aa0.11□□□□□ -2.39
SCARNA16.2-201ENST00000516520 NIPBLQ6KC79 2804 aaeCLIP0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 ANK2Q01484 3957 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 H3BUX3 64 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 KRTAP19-5Q3LI72 72 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 RHPN1-AS1Q9BWJ2 59 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 WDR87Q6ZQQ6 2873 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 BSNQ9UPA5 3926 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 LAMA3Q16787 3333 aa0.1□□□□□ -2.39
SCARNA16.2-201ENST00000516520 MYCBP2O75592 4640 aa0.09□□□□□ -2.39
SCARNA16.2-201ENST00000516520 LRBAP50851 2863 aa0.09□□□□□ -2.39
SCARNA16.2-201ENST00000516520 LAMA1P25391 3075 aa0.09□□□□□ -2.39
SCARNA16.2-201ENST00000516520 HUWE1Q7Z6Z7 4374 aaKnown RBP0.09□□□□□ -2.39
SCARNA16.2-201ENST00000516520 SMR3BP02814 79 aaPredicted RBP0.09□□□□□ -2.4
SCARNA16.2-201ENST00000516520 FAT2Q9NYQ8 4349 aa0.09□□□□□ -2.4
SCARNA16.2-201ENST00000516520 PRKDCP78527 4128 aaKnown RBP0.09□□□□□ -2.4
SCARNA16.2-201ENST00000516520 PCLOQ9Y6V0 5065 aa0.09□□□□□ -2.4
SCARNA16.2-201ENST00000516520 CUBNO60494 3623 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MGAQ8IWI9 3026 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 KALRNO60229 2985 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 C5orf42Q9H799 3197 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 H3BSH0 61 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB1P60022 68 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB136Q30KP8 78 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB124Q8NES8 71 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB104AQ8WTQ1 72 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 LYSTQ99698 3801 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MUC2Q02817 5179 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 LAMA5O15230 3695 aa0.08□□□□□ -2.4
SCARNA16.2-201ENST00000516520 HTTP42858 3142 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DMXL2Q8TDJ6 3036 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 KIAA1109Q2LD37 5005 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 LRP1Q07954 4544 aaKnown RBP0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RPS29P62273 56 aaKnown RBP0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MT1HP80294 61 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 SSPOA2VEC9 5147 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 SVEP1Q4LDE5 3571 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 KMT2AQ03164 3969 aa0.07□□□□□ -2.4
SCARNA16.2-201ENST00000516520 VPS13BQ7Z7G8 4022 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 UBR4Q5T4S7 5183 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MT1EP04732 61 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RPL39P5Q59GN2 51 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RNF213Q63HN8 5207 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 HSPG2P98160 4391 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 ADGRG4Q8IZF6 3080 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 FLGP20930 4061 aaPredicted RBP0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 PKD1P98161 4303 aa0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 ANK3Q12955 4377 aaKnown RBP0.06□□□□□ -2.4
SCARNA16.2-201ENST00000516520 FAT4Q6V0I7 4981 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 LPAP08519 4548 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 ZFHX4Q86UP3 3567 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 HECTD4Q9Y4D8 3996 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MT1LQ93083 61 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MUC12Q9UKN1 5478 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 CFAP54Q96N23 3096 aa0.05□□□□□ -2.4
SCARNA16.2-201ENST00000516520 SACSQ9NZJ4 4579 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 SPENQ96T58 3664 aaKnown RBP0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 ATMQ13315 3056 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 A0A096LNI7 61 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB108AA8MXU0 73 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DEFB133Q30KQ1 61 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 EPPK1P58107 5090 aaKnown RBP0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DNAH3Q8TD57 4116 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 NBPF19A0A087WUL8 3843 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RYR2Q92736 4967 aa0.04□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DNAH11Q96DT5 4516 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 TRIOO75962 3097 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 PRUNE2Q8WUY3 3088 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RYR1P21817 5038 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 HTN1P15515 57 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 MT1XP80297 61 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 HYDINQ4G0P3 5121 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 FRYLO94915 3013 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 RELNP78509 3460 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DNAH9Q9NYC9 4486 aa0.03□□□□□ -2.4
SCARNA16.2-201ENST00000516520 DYNC2H1Q8NCM8 4307 aaKnown RBP0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 ABCA13Q86UQ4 5058 aa0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 PKHD1P08F94 4074 aa0.03□□□□□ -2.41
SCARNA16.2-201ENST00000516520 VPS13DQ5THJ4 4388 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 CD52P31358 61 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 SPRR2GQ9BYE4 73 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 Q9Y3F1 56 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 PKHD1L1Q86WI1 4243 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 LRP2P98164 4655 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 CMYA5Q8N3K9 4069 aa0.02□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH12Q6ZR08 3092 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 DNAH2Q9P225 4427 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 SPTBN5Q9NRC6 3674 aaKnown RBP0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 KMT2CQ8NEZ4 4911 aaKnown RBP0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
SCARNA16.2-201ENST00000516520 KRTAP6-1Q3LI64 71 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms