RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 VPS13DQ5THJ4 4388 aa2.69□□□□□ -1.98
ABCB1-208ENST00000491360 FRAS1Q86XX4 4008 aa2.69□□□□□ -1.98
ABCB1-208ENST00000491360 PRKDCP78527 4128 aaKnown RBP2.69□□□□□ -1.98
ABCB1-208ENST00000491360 LY6G6CO95867 125 aa2.68□□□□□ -1.98
ABCB1-208ENST00000491360 NBEAL1Q6ZS30 2694 aa2.67□□□□□ -1.98
ABCB1-208ENST00000491360 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
ABCB1-208ENST00000491360 STAB1Q9NY15 2570 aa2.67□□□□□ -1.98
ABCB1-208ENST00000491360 A8MUU9 505 aa2.66□□□□□ -1.98
ABCB1-208ENST00000491360 KRTAP13-2Q52LG2 175 aa2.66□□□□□ -1.98
ABCB1-208ENST00000491360 NOTCH1P46531 2555 aa2.66□□□□□ -1.98
ABCB1-208ENST00000491360 SPINK1P00995 79 aa2.65□□□□□ -1.99
ABCB1-208ENST00000491360 SEC61BP60468 96 aaKnown RBP2.65□□□□□ -1.99
ABCB1-208ENST00000491360 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
ABCB1-208ENST00000491360 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
ABCB1-208ENST00000491360 C1orf134Q5TEV5 83 aa2.65□□□□□ -1.99
ABCB1-208ENST00000491360 COL6A5A8TX70 2615 aa2.65□□□□□ -1.99
ABCB1-208ENST00000491360 H0YAA0 97 aa2.64□□□□□ -1.99
ABCB1-208ENST00000491360 PLECQ15149 4684 aaKnown RBP2.64□□□□□ -1.99
ABCB1-208ENST00000491360 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
ABCB1-208ENST00000491360 Q6ZSA8 131 aa2.63□□□□□ -1.99
ABCB1-208ENST00000491360 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
ABCB1-208ENST00000491360 DNAH11Q96DT5 4516 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 A0A1B0GU33 70 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 H1FX-AS1Q4G0G2 97 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 LINC00304Q8N9R0 145 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 DNAH2Q9P225 4427 aa2.62□□□□□ -1.99
ABCB1-208ENST00000491360 K7ERS5 55 aa2.61□□□□□ -1.99
ABCB1-208ENST00000491360 STAB2Q8WWQ8 2551 aa2.61□□□□□ -1.99
ABCB1-208ENST00000491360 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
ABCB1-208ENST00000491360 ROMO1P60602 79 aa2.6□□□□□ -1.99
ABCB1-208ENST00000491360 RPS29P62273 56 aaKnown RBP2.6□□□□□ -1.99
ABCB1-208ENST00000491360 TYMSOSQ8TAI1 123 aa2.6□□□□□ -1.99
ABCB1-208ENST00000491360 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
ABCB1-208ENST00000491360 MEGF8Q7Z7M0 2845 aa2.58□□□□□ -2
ABCB1-208ENST00000491360 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
ABCB1-208ENST00000491360 LCE1CQ5T751 118 aa2.57□□□□□ -2
ABCB1-208ENST00000491360 LCE1BQ5T7P3 118 aa2.57□□□□□ -2
ABCB1-208ENST00000491360 C20orf166-AS1Q96NR2 134 aa2.57□□□□□ -2
ABCB1-208ENST00000491360 TGP01266 2768 aa2.57□□□□□ -2
ABCB1-208ENST00000491360 MGAM2Q2M2H8 2515 aa2.57□□□□□ -2
ABCB1-208ENST00000491360 KRTAP5-8O75690 187 aa2.56□□□□□ -2
ABCB1-208ENST00000491360 KRTAP10-1P60331 282 aa2.56□□□□□ -2
ABCB1-208ENST00000491360 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
ABCB1-208ENST00000491360 FBN3Q75N90 2809 aa2.55□□□□□ -2
ABCB1-208ENST00000491360 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
ABCB1-208ENST00000491360 KMT2AQ03164 3969 aa2.54□□□□□ -2
ABCB1-208ENST00000491360 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
ABCB1-208ENST00000491360 C9orf92A6NGG3 77 aa2.52□□□□□ -2.01
ABCB1-208ENST00000491360 P0C880 135 aa2.51□□□□□ -2.01
ABCB1-208ENST00000491360 RPL37P61927 97 aaKnown RBP2.51□□□□□ -2.01
ABCB1-208ENST00000491360 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
ABCB1-208ENST00000491360 VPS13BQ7Z7G8 4022 aa2.5□□□□□ -2.01
ABCB1-208ENST00000491360 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
ABCB1-208ENST00000491360 PKD1P98161 4303 aa2.49□□□□□ -2.01
ABCB1-208ENST00000491360 FLG2Q5D862 2391 aaPredicted RBP2.49□□□□□ -2.01
ABCB1-208ENST00000491360 PKHD1L1Q86WI1 4243 aa2.48□□□□□ -2.01
ABCB1-208ENST00000491360 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
ABCB1-208ENST00000491360 A0A0D9SG42 100 aa2.45□□□□□ -2.02
ABCB1-208ENST00000491360 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
ABCB1-208ENST00000491360 LRP1BQ9NZR2 4599 aa2.44□□□□□ -2.02
ABCB1-208ENST00000491360 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
ABCB1-208ENST00000491360 S4R3F8 94 aa2.44□□□□□ -2.02
ABCB1-208ENST00000491360 FAT2Q9NYQ8 4349 aa2.42□□□□□ -2.02
ABCB1-208ENST00000491360 C10orf95Q9H7T3 257 aa2.42□□□□□ -2.02
ABCB1-208ENST00000491360 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
ABCB1-208ENST00000491360 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.02
ABCB1-208ENST00000491360 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
ABCB1-208ENST00000491360 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
ABCB1-208ENST00000491360 TNXBP22105 4242 aa2.39□□□□□ -2.03
ABCB1-208ENST00000491360 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
ABCB1-208ENST00000491360 DMBT1Q9UGM3 2413 aaPredicted RBP2.38□□□□□ -2.03
ABCB1-208ENST00000491360 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
ABCB1-208ENST00000491360 M0QZ58 72 aa2.36□□□□□ -2.03
ABCB1-208ENST00000491360 HSPG2P98160 4391 aa2.34□□□□□ -2.03
ABCB1-208ENST00000491360 DYNC1H1Q14204 4646 aaKnown RBP2.34□□□□□ -2.03
ABCB1-208ENST00000491360 FAT1Q14517 4588 aa2.34□□□□□ -2.04
ABCB1-208ENST00000491360 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
ABCB1-208ENST00000491360 FAT3Q8TDW7 4589 aa2.31□□□□□ -2.04
ABCB1-208ENST00000491360 PLAC4Q8WY50 150 aa2.27□□□□□ -2.05
ABCB1-208ENST00000491360 Q5VSD8 79 aa2.25□□□□□ -2.05
ABCB1-208ENST00000491360 R4GN34 69 aa2.25□□□□□ -2.05
ABCB1-208ENST00000491360 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
ABCB1-208ENST00000491360 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
ABCB1-208ENST00000491360 MYCBP2O75592 4640 aa2.22□□□□□ -2.05
ABCB1-208ENST00000491360 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
ABCB1-208ENST00000491360 MT1HL1P0DM35 61 aa2.2□□□□□ -2.06
ABCB1-208ENST00000491360 KRTAP21-3Q3LHN1 58 aa2.17□□□□□ -2.06
ABCB1-208ENST00000491360 RYR2Q92736 4967 aa2.17□□□□□ -2.06
ABCB1-208ENST00000491360 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
ABCB1-208ENST00000491360 RYR1P21817 5038 aa2.13□□□□□ -2.07
ABCB1-208ENST00000491360 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
ABCB1-208ENST00000491360 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
ABCB1-208ENST00000491360 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
ABCB1-208ENST00000491360 TNP1P09430 55 aa2.11□□□□□ -2.07
ABCB1-208ENST00000491360 KMT2CQ8NEZ4 4911 aaKnown RBP2.1□□□□□ -2.07
ABCB1-208ENST00000491360 MUC17Q685J3 4493 aa2.09□□□□□ -2.07
ABCB1-208ENST00000491360 LRP2P98164 4655 aa2.09□□□□□ -2.08
ABCB1-208ENST00000491360 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
ABCB1-208ENST00000491360 LPAP08519 4548 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms