RNA–Protein interactions for RNA: ENST00000491360.1

ABCB1-208, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 2

Gene ABCB1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-208ENST00000491360 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
ABCB1-208ENST00000491360 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
ABCB1-208ENST00000491360 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
ABCB1-208ENST00000491360 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
ABCB1-208ENST00000491360 FOXD1Q16676 465 aa19.02■□□□□ 0.64
ABCB1-208ENST00000491360 MSH5O43196 834 aa18■□□□□ 0.47
ABCB1-208ENST00000491360 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
ABCB1-208ENST00000491360 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
ABCB1-208ENST00000491360 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
ABCB1-208ENST00000491360 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
ABCB1-208ENST00000491360 ADRA2BP18089 450 aa17.48■□□□□ 0.39
ABCB1-208ENST00000491360 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
ABCB1-208ENST00000491360 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
ABCB1-208ENST00000491360 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
ABCB1-208ENST00000491360 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
ABCB1-208ENST00000491360 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
ABCB1-208ENST00000491360 PPP4R3CPQ6ZMV5 832 aa15.51■□□□□ 0.07
ABCB1-208ENST00000491360 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
ABCB1-208ENST00000491360 CNKSR2Q8WXI2 1034 aa15.32■□□□□ 0.04
ABCB1-208ENST00000491360 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
ABCB1-208ENST00000491360 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
ABCB1-208ENST00000491360 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
ABCB1-208ENST00000491360 DNAJC5BQ9UF47 199 aa15.02■□□□□ -0
ABCB1-208ENST00000491360 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
ABCB1-208ENST00000491360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.74□□□□□ -0.05
ABCB1-208ENST00000491360 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
ABCB1-208ENST00000491360 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
ABCB1-208ENST00000491360 CAPN15O75808 1086 aa14.26□□□□□ -0.13
ABCB1-208ENST00000491360 DSG3P32926 999 aa14.21□□□□□ -0.13
ABCB1-208ENST00000491360 SPINK5Q9NQ38 1064 aaPredicted RBP14.2□□□□□ -0.14
ABCB1-208ENST00000491360 POTEHQ6S545 545 aa14.07□□□□□ -0.16
ABCB1-208ENST00000491360 KCNA4P22459 653 aa14.04□□□□□ -0.16
ABCB1-208ENST00000491360 APLP2Q06481 763 aa14.04□□□□□ -0.16
ABCB1-208ENST00000491360 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
ABCB1-208ENST00000491360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
ABCB1-208ENST00000491360 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
ABCB1-208ENST00000491360 TRHP20396 242 aaPredicted RBP13.94□□□□□ -0.18
ABCB1-208ENST00000491360 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
ABCB1-208ENST00000491360 ABCB7O75027 752 aa13.84□□□□□ -0.19
ABCB1-208ENST00000491360 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
ABCB1-208ENST00000491360 RBM42Q9BTD8 480 aaKnown RBP13.64□□□□□ -0.23
ABCB1-208ENST00000491360 MYCNP04198 464 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-208ENST00000491360 POLA2Q14181 598 aa13.5□□□□□ -0.25
ABCB1-208ENST00000491360 CHRDL2Q6WN34 429 aa13.41□□□□□ -0.26
ABCB1-208ENST00000491360 ZBTB12Q9Y330 459 aaPredicted RBP13.28□□□□□ -0.28
ABCB1-208ENST00000491360 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
ABCB1-208ENST00000491360 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
ABCB1-208ENST00000491360 FOXD4L1Q9NU39 408 aa13.24□□□□□ -0.29
ABCB1-208ENST00000491360 ATF5Q9Y2D1 282 aaPredicted RBP13.17□□□□□ -0.3
ABCB1-208ENST00000491360 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
ABCB1-208ENST00000491360 SP7Q8TDD2 431 aaPredicted RBP13.05□□□□□ -0.32
ABCB1-208ENST00000491360 OSCARQ8IYS5 282 aa13.04□□□□□ -0.32
ABCB1-208ENST00000491360 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
ABCB1-208ENST00000491360 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
ABCB1-208ENST00000491360 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
ABCB1-208ENST00000491360 HAX1O00165 279 aa12.89□□□□□ -0.35
ABCB1-208ENST00000491360 FXR2P51116 673 aaKnown RBP eCLIP12.89□□□□□ -0.35
ABCB1-208ENST00000491360 ZBTB22O15209 634 aa12.85□□□□□ -0.35
ABCB1-208ENST00000491360 FBLN2P98095 1184 aa12.81□□□□□ -0.36
ABCB1-208ENST00000491360 SPDYE2BA6NHP3 402 aa12.8□□□□□ -0.36
ABCB1-208ENST00000491360 SPDYE6P0CI01 402 aa12.8□□□□□ -0.36
ABCB1-208ENST00000491360 SPDYE2Q495Y8 402 aa12.8□□□□□ -0.36
ABCB1-208ENST00000491360 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
ABCB1-208ENST00000491360 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
ABCB1-208ENST00000491360 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
ABCB1-208ENST00000491360 EVX2Q03828 476 aa12.61□□□□□ -0.39
ABCB1-208ENST00000491360 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
ABCB1-208ENST00000491360 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
ABCB1-208ENST00000491360 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
ABCB1-208ENST00000491360 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
ABCB1-208ENST00000491360 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
ABCB1-208ENST00000491360 PABPN1Q86U42 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
ABCB1-208ENST00000491360 GABBR2O75899 941 aa12.37□□□□□ -0.43
ABCB1-208ENST00000491360 CHADLQ6NUI6 762 aa12.35□□□□□ -0.43
ABCB1-208ENST00000491360 LHX8Q68G74 356 aa12.25□□□□□ -0.45
ABCB1-208ENST00000491360 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.45
ABCB1-208ENST00000491360 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
ABCB1-208ENST00000491360 CLCN6P51797 869 aa12.2□□□□□ -0.46
ABCB1-208ENST00000491360 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
ABCB1-208ENST00000491360 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
ABCB1-208ENST00000491360 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
ABCB1-208ENST00000491360 DCBLD2Q96PD2 775 aa12.03□□□□□ -0.48
ABCB1-208ENST00000491360 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
ABCB1-208ENST00000491360 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
ABCB1-208ENST00000491360 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
ABCB1-208ENST00000491360 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
ABCB1-208ENST00000491360 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
ABCB1-208ENST00000491360 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
ABCB1-208ENST00000491360 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
ABCB1-208ENST00000491360 PHF12Q96QT6 1004 aa11.75□□□□□ -0.53
ABCB1-208ENST00000491360 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
ABCB1-208ENST00000491360 MNX1P50219 401 aaPredicted RBP11.71□□□□□ -0.53
ABCB1-208ENST00000491360 OTUD5Q96G74 571 aa11.7□□□□□ -0.54
ABCB1-208ENST00000491360 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
ABCB1-208ENST00000491360 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
ABCB1-208ENST00000491360 PELP1Q8IZL8 1130 aaKnown RBP11.61□□□□□ -0.55
ABCB1-208ENST00000491360 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
ABCB1-208ENST00000491360 C7P10643 843 aa11.59□□□□□ -0.55
ABCB1-208ENST00000491360 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
ABCB1-208ENST00000491360 MS4A3Q96HJ5 214 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms