RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 CRIPTQ9P021 101 aa2.56□□□□□ -2
CDC42BPA-213ENST00000488131 NBEAL1Q6ZS30 2694 aa2.56□□□□□ -2
CDC42BPA-213ENST00000488131 LCE1FQ5T754 118 aa2.56□□□□□ -2
CDC42BPA-213ENST00000488131 HUWE1Q7Z6Z7 4374 aaKnown RBP2.55□□□□□ -2
CDC42BPA-213ENST00000488131 COL7A1Q02388 2944 aa2.55□□□□□ -2
CDC42BPA-213ENST00000488131 DYNC2H1Q8NCM8 4307 aaKnown RBP2.55□□□□□ -2
CDC42BPA-213ENST00000488131 ATRQ13535 2644 aa2.55□□□□□ -2
CDC42BPA-213ENST00000488131 MAST4O15021 2626 aa2.55□□□□□ -2
CDC42BPA-213ENST00000488131 VPS13DQ5THJ4 4388 aa2.55□□□□□ -2
CDC42BPA-213ENST00000488131 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
CDC42BPA-213ENST00000488131 SMR3AQ99954 134 aa2.54□□□□□ -2
CDC42BPA-213ENST00000488131 NSD1Q96L73 2696 aaPredicted RBP2.54□□□□□ -2
CDC42BPA-213ENST00000488131 FLNBO75369 2602 aaKnown RBP2.54□□□□□ -2
CDC42BPA-213ENST00000488131 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
CDC42BPA-213ENST00000488131 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
CDC42BPA-213ENST00000488131 FLG2Q5D862 2391 aaPredicted RBP2.53□□□□□ -2
CDC42BPA-213ENST00000488131 RPL37P61927 97 aaKnown RBP2.53□□□□□ -2
CDC42BPA-213ENST00000488131 APLNQ9ULZ1 77 aa2.53□□□□□ -2
CDC42BPA-213ENST00000488131 NBDYA0A0U1RRE5 68 aa2.52□□□□□ -2.01
CDC42BPA-213ENST00000488131 UBE2DNLQ8IWF7 75 aa2.52□□□□□ -2.01
CDC42BPA-213ENST00000488131 NOTCH1P46531 2555 aa2.52□□□□□ -2.01
CDC42BPA-213ENST00000488131 CMYA5Q8N3K9 4069 aa2.52□□□□□ -2.01
CDC42BPA-213ENST00000488131 USP24Q9UPU5 2620 aa2.51□□□□□ -2.01
CDC42BPA-213ENST00000488131 KRTAP13-2Q52LG2 175 aa2.51□□□□□ -2.01
CDC42BPA-213ENST00000488131 PRKDCP78527 4128 aaKnown RBP2.5□□□□□ -2.01
CDC42BPA-213ENST00000488131 TGP01266 2768 aa2.5□□□□□ -2.01
CDC42BPA-213ENST00000488131 ITPR2Q14571 2701 aa2.5□□□□□ -2.01
CDC42BPA-213ENST00000488131 HECTD4Q9Y4D8 3996 aa2.49□□□□□ -2.01
CDC42BPA-213ENST00000488131 DNAH7Q8WXX0 4024 aa2.49□□□□□ -2.01
CDC42BPA-213ENST00000488131 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
CDC42BPA-213ENST00000488131 C10orf95Q9H7T3 257 aa2.48□□□□□ -2.01
CDC42BPA-213ENST00000488131 DNAH6Q9C0G6 4158 aa2.46□□□□□ -2.02
CDC42BPA-213ENST00000488131 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
CDC42BPA-213ENST00000488131 STAB2Q8WWQ8 2551 aa2.46□□□□□ -2.02
CDC42BPA-213ENST00000488131 RPS29P62273 56 aaKnown RBP2.45□□□□□ -2.02
CDC42BPA-213ENST00000488131 KRTAP1-4P0C5Y4 121 aa2.45□□□□□ -2.02
CDC42BPA-213ENST00000488131 PLECQ15149 4684 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-213ENST00000488131 COL6A5A8TX70 2615 aa2.44□□□□□ -2.02
CDC42BPA-213ENST00000488131 DNAH2Q9P225 4427 aa2.44□□□□□ -2.02
CDC42BPA-213ENST00000488131 S4R3F8 94 aa2.43□□□□□ -2.02
CDC42BPA-213ENST00000488131 DNAH11Q96DT5 4516 aa2.42□□□□□ -2.02
CDC42BPA-213ENST00000488131 KRTAP10-12P60413 245 aa2.41□□□□□ -2.02
CDC42BPA-213ENST00000488131 FBN3Q75N90 2809 aa2.41□□□□□ -2.02
CDC42BPA-213ENST00000488131 KMT2AQ03164 3969 aa2.4□□□□□ -2.03
CDC42BPA-213ENST00000488131 A0A0D9SG42 100 aa2.4□□□□□ -2.03
CDC42BPA-213ENST00000488131 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
CDC42BPA-213ENST00000488131 STAB1Q9NY15 2570 aa2.39□□□□□ -2.03
CDC42BPA-213ENST00000488131 KRTAP12-1P59990 96 aa2.38□□□□□ -2.03
CDC42BPA-213ENST00000488131 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
CDC42BPA-213ENST00000488131 MGAM2Q2M2H8 2515 aa2.38□□□□□ -2.03
CDC42BPA-213ENST00000488131 SACSQ9NZJ4 4579 aa2.37□□□□□ -2.03
CDC42BPA-213ENST00000488131 LCE3CQ5T5A8 94 aa2.37□□□□□ -2.03
CDC42BPA-213ENST00000488131 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
CDC42BPA-213ENST00000488131 J3QKU1 62 aa2.35□□□□□ -2.03
CDC42BPA-213ENST00000488131 STARD9Q9P2P6 4700 aa2.35□□□□□ -2.03
CDC42BPA-213ENST00000488131 PLAC4Q8WY50 150 aa2.34□□□□□ -2.03
CDC42BPA-213ENST00000488131 PKHD1L1Q86WI1 4243 aa2.34□□□□□ -2.04
CDC42BPA-213ENST00000488131 C9orf92A6NGG3 77 aa2.33□□□□□ -2.04
CDC42BPA-213ENST00000488131 M0QZ58 72 aa2.31□□□□□ -2.04
CDC42BPA-213ENST00000488131 VPS13BQ7Z7G8 4022 aa2.31□□□□□ -2.04
CDC42BPA-213ENST00000488131 DMBT1Q9UGM3 2413 aaPredicted RBP2.3□□□□□ -2.04
CDC42BPA-213ENST00000488131 A0A1B0GVY2 172 aa2.3□□□□□ -2.04
CDC42BPA-213ENST00000488131 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
CDC42BPA-213ENST00000488131 PKD1P98161 4303 aa2.28□□□□□ -2.04
CDC42BPA-213ENST00000488131 PKHD1P08F94 4074 aa2.27□□□□□ -2.05
CDC42BPA-213ENST00000488131 PP632Q6XCG6 107 aa2.26□□□□□ -2.05
CDC42BPA-213ENST00000488131 MYCBP2O75592 4640 aa2.26□□□□□ -2.05
CDC42BPA-213ENST00000488131 FAT2Q9NYQ8 4349 aa2.25□□□□□ -2.05
CDC42BPA-213ENST00000488131 LRP1Q07954 4544 aaKnown RBP2.25□□□□□ -2.05
CDC42BPA-213ENST00000488131 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
CDC42BPA-213ENST00000488131 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
CDC42BPA-213ENST00000488131 APOBP04114 4563 aaKnown RBP2.24□□□□□ -2.05
CDC42BPA-213ENST00000488131 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
CDC42BPA-213ENST00000488131 TNXBP22105 4242 aa2.22□□□□□ -2.05
CDC42BPA-213ENST00000488131 LCE3AQ5TA76 89 aa2.21□□□□□ -2.06
CDC42BPA-213ENST00000488131 PRO2289Q9P1D8 64 aa2.21□□□□□ -2.06
CDC42BPA-213ENST00000488131 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
CDC42BPA-213ENST00000488131 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
CDC42BPA-213ENST00000488131 HSPG2P98160 4391 aa2.18□□□□□ -2.06
CDC42BPA-213ENST00000488131 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
CDC42BPA-213ENST00000488131 DYNC1H1Q14204 4646 aaKnown RBP2.17□□□□□ -2.06
CDC42BPA-213ENST00000488131 FAT1Q14517 4588 aa2.15□□□□□ -2.07
CDC42BPA-213ENST00000488131 R4GN34 69 aa2.15□□□□□ -2.07
CDC42BPA-213ENST00000488131 INE1O15225 51 aa2.14□□□□□ -2.07
CDC42BPA-213ENST00000488131 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
CDC42BPA-213ENST00000488131 SMR3BP02814 79 aaPredicted RBP2.09□□□□□ -2.08
CDC42BPA-213ENST00000488131 Q5VSD8 79 aa2.06□□□□□ -2.08
CDC42BPA-213ENST00000488131 TNP1P09430 55 aa2.05□□□□□ -2.08
CDC42BPA-213ENST00000488131 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.09
CDC42BPA-213ENST00000488131 DNHD1Q96M86 4753 aa2.02□□□□□ -2.09
CDC42BPA-213ENST00000488131 LPAP08519 4548 aa2.02□□□□□ -2.09
CDC42BPA-213ENST00000488131 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
CDC42BPA-213ENST00000488131 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CDC42BPA-213ENST00000488131 FLGP20930 4061 aaPredicted RBP1.99□□□□□ -2.09
CDC42BPA-213ENST00000488131 LRP2P98164 4655 aa1.98□□□□□ -2.09
CDC42BPA-213ENST00000488131 KMT2CQ8NEZ4 4911 aaKnown RBP1.97□□□□□ -2.09
CDC42BPA-213ENST00000488131 MT1HL1P0DM35 61 aa1.96□□□□□ -2.1
CDC42BPA-213ENST00000488131 MUC17Q685J3 4493 aa1.95□□□□□ -2.1
CDC42BPA-213ENST00000488131 KRTAP19-2Q3LHN2 52 aa1.94□□□□□ -2.1
CDC42BPA-213ENST00000488131 HERC1Q15751 4861 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms