RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 SPRR2AP35326 72 aa0.53□□□□□ -2.32
VPS8-215ENST00000460158 LRP1Q07954 4544 aaKnown RBP0.53□□□□□ -2.32
VPS8-215ENST00000460158 ANK3Q12955 4377 aaKnown RBP0.53□□□□□ -2.32
VPS8-215ENST00000460158 RANBP2P49792 3224 aaKnown RBP0.53□□□□□ -2.33
VPS8-215ENST00000460158 TGP01266 2768 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 MT1AP04731 61 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 HTN1P15515 57 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 KALRNO60229 2985 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 DNAH2Q9P225 4427 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 CEP250Q9BV73 2442 aa0.52□□□□□ -2.33
VPS8-215ENST00000460158 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
VPS8-215ENST00000460158 LPAP08519 4548 aa0.51□□□□□ -2.33
VPS8-215ENST00000460158 HIVEP1P15822 2718 aa0.51□□□□□ -2.33
VPS8-215ENST00000460158 DEFB136Q30KP8 78 aa0.51□□□□□ -2.33
VPS8-215ENST00000460158 KRTAP6-2Q3LI66 62 aa0.51□□□□□ -2.33
VPS8-215ENST00000460158 DNAH6Q9C0G6 4158 aa0.5□□□□□ -2.33
VPS8-215ENST00000460158 HSPG2P98160 4391 aa0.5□□□□□ -2.33
VPS8-215ENST00000460158 TEP1Q99973 2627 aaKnown RBP0.5□□□□□ -2.33
VPS8-215ENST00000460158 DEFB124Q8NES8 71 aa0.5□□□□□ -2.33
VPS8-215ENST00000460158 USP9XQ93008 2570 aaPredicted RBP0.5□□□□□ -2.33
VPS8-215ENST00000460158 FASNP49327 2511 aaKnown RBP0.49□□□□□ -2.33
VPS8-215ENST00000460158 AKAP9Q99996 3911 aa0.49□□□□□ -2.33
VPS8-215ENST00000460158 SPTBN5Q9NRC6 3674 aaKnown RBP0.49□□□□□ -2.33
VPS8-215ENST00000460158 SYNE1Q8NF91 8797 aaKnown RBP0.49□□□□□ -2.33
VPS8-215ENST00000460158 DEFB1P60022 68 aa0.49□□□□□ -2.33
VPS8-215ENST00000460158 LAMA5O15230 3695 aa0.48□□□□□ -2.33
VPS8-215ENST00000460158 SMR3BP02814 79 aaPredicted RBP0.48□□□□□ -2.33
VPS8-215ENST00000460158 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
VPS8-215ENST00000460158 DNAH8Q96JB1 4490 aa0.48□□□□□ -2.33
VPS8-215ENST00000460158 CFAP54Q96N23 3096 aa0.47□□□□□ -2.33
VPS8-215ENST00000460158 WDR87Q6ZQQ6 2873 aa0.47□□□□□ -2.33
VPS8-215ENST00000460158 MXRA5Q9NR99 2828 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 ITPR1Q14643 2758 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 RELNP78509 3460 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 MAST4O15021 2626 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 SVEP1Q4LDE5 3571 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 SPRR2EP22531 72 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 DEFB133Q30KQ1 61 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 LAMA1P25391 3075 aa0.46□□□□□ -2.34
VPS8-215ENST00000460158 HTTP42858 3142 aa0.45□□□□□ -2.34
VPS8-215ENST00000460158 DMXL2Q8TDJ6 3036 aa0.45□□□□□ -2.34
VPS8-215ENST00000460158 KRTAP19-5Q3LI72 72 aa0.45□□□□□ -2.34
VPS8-215ENST00000460158 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
VPS8-215ENST00000460158 DNAH9Q9NYC9 4486 aa0.45□□□□□ -2.34
VPS8-215ENST00000460158 MGAM2Q2M2H8 2515 aa0.44□□□□□ -2.34
VPS8-215ENST00000460158 LRBAP50851 2863 aa0.44□□□□□ -2.34
VPS8-215ENST00000460158 SPTAN1Q13813 2472 aaKnown RBP0.44□□□□□ -2.34
VPS8-215ENST00000460158 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
VPS8-215ENST00000460158 PKHD1P08F94 4074 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 COL6A3P12111 3177 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 DOPEY1Q5JWR5 2465 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 TEX15Q9BXT5 2789 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 TRIOO75962 3097 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 CSMD1Q96PZ7 3565 aa0.43□□□□□ -2.34
VPS8-215ENST00000460158 DNAH1Q9P2D7 4330 aa0.42□□□□□ -2.34
VPS8-215ENST00000460158 ADGRG4Q8IZF6 3080 aa0.42□□□□□ -2.34
VPS8-215ENST00000460158 LRP1BQ9NZR2 4599 aa0.42□□□□□ -2.34
VPS8-215ENST00000460158 APOBP04114 4563 aaKnown RBP0.41□□□□□ -2.34
VPS8-215ENST00000460158 FAT3Q8TDW7 4589 aa0.41□□□□□ -2.34
VPS8-215ENST00000460158 MAP1AP78559 2803 aaPredicted RBP0.41□□□□□ -2.34
VPS8-215ENST00000460158 HMCN2Q8NDA2 5059 aa0.4□□□□□ -2.34
VPS8-215ENST00000460158 PRUNE2Q8WUY3 3088 aa0.4□□□□□ -2.35
VPS8-215ENST00000460158 FAT4Q6V0I7 4981 aa0.4□□□□□ -2.35
VPS8-215ENST00000460158 DNAH10Q8IVF4 4471 aa0.4□□□□□ -2.35
VPS8-215ENST00000460158 ATMQ13315 3056 aa0.39□□□□□ -2.35
VPS8-215ENST00000460158 FRYLO94915 3013 aa0.39□□□□□ -2.35
VPS8-215ENST00000460158 CMYA5Q8N3K9 4069 aa0.39□□□□□ -2.35
VPS8-215ENST00000460158 FAT1Q14517 4588 aa0.38□□□□□ -2.35
VPS8-215ENST00000460158 SMG1Q96Q15 3661 aaKnown RBP0.38□□□□□ -2.35
VPS8-215ENST00000460158 C5orf42Q9H799 3197 aa0.38□□□□□ -2.35
VPS8-215ENST00000460158 RPS29P62273 56 aaKnown RBP0.38□□□□□ -2.35
VPS8-215ENST00000460158 CFAP46Q8IYW2 2715 aa0.38□□□□□ -2.35
VPS8-215ENST00000460158 MACF1Q9UPN3 7388 aaKnown RBP0.38□□□□□ -2.35
VPS8-215ENST00000460158 NIPBLQ6KC79 2804 aaeCLIP0.37□□□□□ -2.35
VPS8-215ENST00000460158 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
VPS8-215ENST00000460158 CD52P31358 61 aa0.37□□□□□ -2.35
VPS8-215ENST00000460158 NBEAL1Q6ZS30 2694 aa0.37□□□□□ -2.35
VPS8-215ENST00000460158 A0A096LPF7 62 aa0.36□□□□□ -2.35
VPS8-215ENST00000460158 STATHP02808 62 aa0.35□□□□□ -2.35
VPS8-215ENST00000460158 PLECQ15149 4684 aaKnown RBP0.35□□□□□ -2.35
VPS8-215ENST00000460158 TLN1Q9Y490 2541 aaKnown RBP0.34□□□□□ -2.35
VPS8-215ENST00000460158 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
VPS8-215ENST00000460158 LINC01556Q5JQF7 62 aa0.34□□□□□ -2.36
VPS8-215ENST00000460158 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
VPS8-215ENST00000460158 Q9Y3F1 56 aa0.34□□□□□ -2.36
VPS8-215ENST00000460158 TRRAPQ9Y4A5 3859 aa0.34□□□□□ -2.36
VPS8-215ENST00000460158 KMT2DO14686 5537 aa0.33□□□□□ -2.36
VPS8-215ENST00000460158 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
VPS8-215ENST00000460158 DEFB108BQ8NET1 73 aa0.33□□□□□ -2.36
VPS8-215ENST00000460158 HERC1Q15751 4861 aa0.32□□□□□ -2.36
VPS8-215ENST00000460158 ITPR2Q14571 2701 aa0.31□□□□□ -2.36
VPS8-215ENST00000460158 MT1HP80294 61 aa0.31□□□□□ -2.36
VPS8-215ENST00000460158 DMDP11532 3685 aa0.31□□□□□ -2.36
VPS8-215ENST00000460158 SRCAPQ6ZRS2 3230 aa0.3□□□□□ -2.36
VPS8-215ENST00000460158 SYNE2Q8WXH0 6885 aaKnown RBP0.3□□□□□ -2.36
VPS8-215ENST00000460158 CSMD2Q7Z408 3487 aa0.29□□□□□ -2.36
VPS8-215ENST00000460158 MT1EP04732 61 aa0.29□□□□□ -2.36
VPS8-215ENST00000460158 LRP2P98164 4655 aa0.29□□□□□ -2.36
VPS8-215ENST00000460158 CENPEQ02224 2701 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms