RNA–Protein interactions for RNA: ENST00000415910.2

LINC01661-201, Transcript of long intergenic non-protein coding RNA 1661, humanhuman

TSL 3 BASIC

Gene LINC01661, Length 708 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01661-201ENST00000415910 RIF1Q5UIP0 2472 aaKnown RBP0.93□□□□□ -2.26
LINC01661-201ENST00000415910 DNHD1Q96M86 4753 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 DNAH8Q96JB1 4490 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 RPL39P5Q59GN2 51 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 CFAP54Q96N23 3096 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 PCLOQ9Y6V0 5065 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 CENPFP49454 3210 aa0.93□□□□□ -2.26
LINC01661-201ENST00000415910 TLN1Q9Y490 2541 aaKnown RBP0.92□□□□□ -2.26
LINC01661-201ENST00000415910 HECTD4Q9Y4D8 3996 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 WDFY4Q6ZS81 3184 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 C5orf42Q9H799 3197 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 DNAH12Q6ZR08 3092 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
LINC01661-201ENST00000415910 DCHS2Q6V1P9 2916 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 SPENQ96T58 3664 aaKnown RBP0.92□□□□□ -2.26
LINC01661-201ENST00000415910 NBEAL1Q6ZS30 2694 aa0.92□□□□□ -2.26
LINC01661-201ENST00000415910 NBPF19A0A087WUL8 3843 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 CEP295Q9C0D2 2601 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 MUC3AQ02505 3323 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 SPG11Q96JI7 2443 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 COL7A1Q02388 2944 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 FRYQ5TBA9 3013 aa0.91□□□□□ -2.26
LINC01661-201ENST00000415910 COL12A1Q99715 3063 aa0.9□□□□□ -2.27
LINC01661-201ENST00000415910 NBEAL2Q6ZNJ1 2754 aa0.9□□□□□ -2.27
LINC01661-201ENST00000415910 WDR87Q6ZQQ6 2873 aa0.9□□□□□ -2.27
LINC01661-201ENST00000415910 CEP250Q9BV73 2442 aa0.89□□□□□ -2.27
LINC01661-201ENST00000415910 SYNE1Q8NF91 8797 aaKnown RBP0.89□□□□□ -2.27
LINC01661-201ENST00000415910 FLNAP21333 2647 aaKnown RBP0.89□□□□□ -2.27
LINC01661-201ENST00000415910 ANKHD1Q8IWZ3 2542 aaKnown RBP0.89□□□□□ -2.27
LINC01661-201ENST00000415910 SONP18583 2426 aaKnown RBP0.89□□□□□ -2.27
LINC01661-201ENST00000415910 FAM186AA6NE01 2351 aa0.89□□□□□ -2.27
LINC01661-201ENST00000415910 DNAH9Q9NYC9 4486 aa0.88□□□□□ -2.27
LINC01661-201ENST00000415910 PRUNE2Q8WUY3 3088 aa0.88□□□□□ -2.27
LINC01661-201ENST00000415910 BRCA2P51587 3418 aa0.88□□□□□ -2.27
LINC01661-201ENST00000415910 ITPR1Q14643 2758 aa0.88□□□□□ -2.27
LINC01661-201ENST00000415910 HRNRQ86YZ3 2850 aaPredicted RBP0.87□□□□□ -2.27
LINC01661-201ENST00000415910 HTTP42858 3142 aa0.87□□□□□ -2.27
LINC01661-201ENST00000415910 DNAH7Q8WXX0 4024 aa0.87□□□□□ -2.27
LINC01661-201ENST00000415910 MT1AP04731 61 aa0.87□□□□□ -2.27
LINC01661-201ENST00000415910 KRTAP6-2Q3LI66 62 aa0.87□□□□□ -2.27
LINC01661-201ENST00000415910 SPEGQ15772 3267 aa0.87□□□□□ -2.27
LINC01661-201ENST00000415910 LAMA3Q16787 3333 aa0.86□□□□□ -2.27
LINC01661-201ENST00000415910 CELSR3Q9NYQ7 3312 aa0.86□□□□□ -2.27
LINC01661-201ENST00000415910 USP9YO00507 2555 aaPredicted RBP0.86□□□□□ -2.27
LINC01661-201ENST00000415910 UBR4Q5T4S7 5183 aa0.86□□□□□ -2.27
LINC01661-201ENST00000415910 USP34Q70CQ2 3546 aa0.86□□□□□ -2.27
LINC01661-201ENST00000415910 RYR3Q15413 4870 aa0.86□□□□□ -2.27
LINC01661-201ENST00000415910 APOBP04114 4563 aaKnown RBP0.85□□□□□ -2.27
LINC01661-201ENST00000415910 KIAA1109Q2LD37 5005 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 DNAH6Q9C0G6 4158 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 DEFB108AA8MXU0 73 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 SPRR2AP35326 72 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 RYR1P21817 5038 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 BIRC6Q9NR09 4857 aa0.85□□□□□ -2.27
LINC01661-201ENST00000415910 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.27
LINC01661-201ENST00000415910 FLGP20930 4061 aaPredicted RBP0.84□□□□□ -2.27
LINC01661-201ENST00000415910 TENM3Q9P273 2699 aa0.84□□□□□ -2.28
LINC01661-201ENST00000415910 CDH23Q9H251 3354 aa0.83□□□□□ -2.28
LINC01661-201ENST00000415910 ASPMQ8IZT6 3477 aa0.83□□□□□ -2.28
LINC01661-201ENST00000415910 VPS13AQ96RL7 3174 aa0.82□□□□□ -2.28
LINC01661-201ENST00000415910 TLN2Q9Y4G6 2542 aa0.82□□□□□ -2.28
LINC01661-201ENST00000415910 NBEAQ8NFP9 2946 aa0.82□□□□□ -2.28
LINC01661-201ENST00000415910 UTP20O75691 2785 aaKnown RBP0.82□□□□□ -2.28
LINC01661-201ENST00000415910 SMG1Q96Q15 3661 aaKnown RBP0.82□□□□□ -2.28
LINC01661-201ENST00000415910 XIRP2A4UGR9 3374 aa0.81□□□□□ -2.28
LINC01661-201ENST00000415910 RELNP78509 3460 aa0.81□□□□□ -2.28
LINC01661-201ENST00000415910 BOD1L1Q8NFC6 3051 aa0.8□□□□□ -2.28
LINC01661-201ENST00000415910 LOC400499M0QZD8 3231 aa0.8□□□□□ -2.28
LINC01661-201ENST00000415910 RHPN1-AS1Q9BWJ2 59 aa0.8□□□□□ -2.28
LINC01661-201ENST00000415910 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
LINC01661-201ENST00000415910 MGAQ8IWI9 3026 aa0.8□□□□□ -2.28
LINC01661-201ENST00000415910 HIVEP1P15822 2718 aa0.79□□□□□ -2.28
LINC01661-201ENST00000415910 DNAH1Q9P2D7 4330 aa0.79□□□□□ -2.28
LINC01661-201ENST00000415910 H3BUX3 64 aa0.79□□□□□ -2.28
LINC01661-201ENST00000415910 SMR3BP02814 79 aaPredicted RBP0.79□□□□□ -2.28
LINC01661-201ENST00000415910 LRP1BQ9NZR2 4599 aa0.79□□□□□ -2.28
LINC01661-201ENST00000415910 NIPBLQ6KC79 2804 aaeCLIP0.79□□□□□ -2.28
LINC01661-201ENST00000415910 TRIOO75962 3097 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 LAMA5O15230 3695 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 LRBAP50851 2863 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 FREM2Q5SZK8 3169 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 DNAH14Q0VDD8 3507 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 MGAM2Q2M2H8 2515 aa0.78□□□□□ -2.28
LINC01661-201ENST00000415910 TGP01266 2768 aa0.78□□□□□ -2.29
LINC01661-201ENST00000415910 FRYLO94915 3013 aa0.78□□□□□ -2.29
LINC01661-201ENST00000415910 EPPK1P58107 5090 aaKnown RBP0.77□□□□□ -2.29
LINC01661-201ENST00000415910 ZANQ9Y493 2812 aa0.77□□□□□ -2.29
LINC01661-201ENST00000415910 MUC2Q02817 5179 aa0.77□□□□□ -2.29
LINC01661-201ENST00000415910 PKHD1P08F94 4074 aa0.77□□□□□ -2.29
LINC01661-201ENST00000415910 FAT3Q8TDW7 4589 aa0.76□□□□□ -2.29
LINC01661-201ENST00000415910 KMT2CQ8NEZ4 4911 aaKnown RBP0.76□□□□□ -2.29
LINC01661-201ENST00000415910 HERC2O95714 4834 aa0.76□□□□□ -2.29
LINC01661-201ENST00000415910 CSMD1Q96PZ7 3565 aa0.76□□□□□ -2.29
LINC01661-201ENST00000415910 SYNE2Q8WXH0 6885 aaKnown RBP0.76□□□□□ -2.29
LINC01661-201ENST00000415910 ITPR2Q14571 2701 aa0.76□□□□□ -2.29
LINC01661-201ENST00000415910 MXRA5Q9NR99 2828 aa0.75□□□□□ -2.29
LINC01661-201ENST00000415910 HYDINQ4G0P3 5121 aa0.75□□□□□ -2.29
LINC01661-201ENST00000415910 RYR2Q92736 4967 aa0.75□□□□□ -2.29
LINC01661-201ENST00000415910 HERC1Q15751 4861 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms