RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
RSF1-201ENST00000308488 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
RSF1-201ENST00000308488 VPS13DQ5THJ4 4388 aa3.12□□□□□ -1.91
RSF1-201ENST00000308488 LAMA3Q16787 3333 aa3.11□□□□□ -1.91
RSF1-201ENST00000308488 PKHD1P08F94 4074 aa3.11□□□□□ -1.91
RSF1-201ENST00000308488 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
RSF1-201ENST00000308488 CDH23Q9H251 3354 aa3.08□□□□□ -1.92
RSF1-201ENST00000308488 LOC400499M0QZD8 3231 aa3.08□□□□□ -1.92
RSF1-201ENST00000308488 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
RSF1-201ENST00000308488 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
RSF1-201ENST00000308488 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
RSF1-201ENST00000308488 LRP1Q07954 4544 aaKnown RBP3.04□□□□□ -1.92
RSF1-201ENST00000308488 DYNC1H1Q14204 4646 aaKnown RBP3.03□□□□□ -1.92
RSF1-201ENST00000308488 CRCT1Q9UGL9 99 aa3.01□□□□□ -1.93
RSF1-201ENST00000308488 WDFY3Q8IZQ1 3526 aa3.01□□□□□ -1.93
RSF1-201ENST00000308488 DNAH17Q9UFH2 4485 aa3□□□□□ -1.93
RSF1-201ENST00000308488 LCE3CQ5T5A8 94 aa2.99□□□□□ -1.93
RSF1-201ENST00000308488 CSMD1Q96PZ7 3565 aa2.98□□□□□ -1.93
RSF1-201ENST00000308488 ANK3Q12955 4377 aaKnown RBP2.98□□□□□ -1.93
RSF1-201ENST00000308488 DYNC2H1Q8NCM8 4307 aaKnown RBP2.98□□□□□ -1.93
RSF1-201ENST00000308488 CSMD3Q7Z407 3707 aa2.98□□□□□ -1.93
RSF1-201ENST00000308488 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
RSF1-201ENST00000308488 HSPG2P98160 4391 aa2.97□□□□□ -1.93
RSF1-201ENST00000308488 CUBNO60494 3623 aa2.96□□□□□ -1.94
RSF1-201ENST00000308488 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
RSF1-201ENST00000308488 SACSQ9NZJ4 4579 aa2.95□□□□□ -1.94
RSF1-201ENST00000308488 DNAH9Q9NYC9 4486 aa2.91□□□□□ -1.94
RSF1-201ENST00000308488 ASPMQ8IZT6 3477 aa2.91□□□□□ -1.94
RSF1-201ENST00000308488 KRTAP21-3Q3LHN1 58 aa2.89□□□□□ -1.95
RSF1-201ENST00000308488 DNAH8Q96JB1 4490 aa2.89□□□□□ -1.95
RSF1-201ENST00000308488 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
RSF1-201ENST00000308488 MYCBP2O75592 4640 aa2.88□□□□□ -1.95
RSF1-201ENST00000308488 SPRR2GQ9BYE4 73 aa2.87□□□□□ -1.95
RSF1-201ENST00000308488 DNAH5Q8TE73 4624 aa2.87□□□□□ -1.95
RSF1-201ENST00000308488 RELNP78509 3460 aa2.87□□□□□ -1.95
RSF1-201ENST00000308488 PKD1P98161 4303 aa2.85□□□□□ -1.95
RSF1-201ENST00000308488 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
RSF1-201ENST00000308488 FAT2Q9NYQ8 4349 aa2.83□□□□□ -1.96
RSF1-201ENST00000308488 PLECQ15149 4684 aaKnown RBP2.82□□□□□ -1.96
RSF1-201ENST00000308488 APOBP04114 4563 aaKnown RBP2.8□□□□□ -1.96
RSF1-201ENST00000308488 MT3P25713 68 aa2.76□□□□□ -1.97
RSF1-201ENST00000308488 SVEP1Q4LDE5 3571 aa2.76□□□□□ -1.97
RSF1-201ENST00000308488 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
RSF1-201ENST00000308488 KRTAP10-7P60409 375 aaPredicted RBP2.74□□□□□ -1.97
RSF1-201ENST00000308488 MUC3AQ02505 3323 aa2.73□□□□□ -1.97
RSF1-201ENST00000308488 TNXBP22105 4242 aa2.71□□□□□ -1.98
RSF1-201ENST00000308488 LRP1BQ9NZR2 4599 aa2.67□□□□□ -1.98
RSF1-201ENST00000308488 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
RSF1-201ENST00000308488 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
RSF1-201ENST00000308488 FAT1Q14517 4588 aa2.64□□□□□ -1.99
RSF1-201ENST00000308488 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
RSF1-201ENST00000308488 MT2AP02795 61 aa2.63□□□□□ -1.99
RSF1-201ENST00000308488 RYR1P21817 5038 aa2.62□□□□□ -1.99
RSF1-201ENST00000308488 FAT3Q8TDW7 4589 aa2.61□□□□□ -1.99
RSF1-201ENST00000308488 CSMD2Q7Z408 3487 aa2.61□□□□□ -1.99
RSF1-201ENST00000308488 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
RSF1-201ENST00000308488 MT1XP80297 61 aa2.61□□□□□ -1.99
RSF1-201ENST00000308488 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
RSF1-201ENST00000308488 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -1.99
RSF1-201ENST00000308488 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -1.99
RSF1-201ENST00000308488 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
RSF1-201ENST00000308488 MT1FP04733 61 aa2.57□□□□□ -2
RSF1-201ENST00000308488 KRTAP19-1Q8IUB9 90 aa2.57□□□□□ -2
RSF1-201ENST00000308488 PRM1P04553 51 aa2.57□□□□□ -2
RSF1-201ENST00000308488 BIRC6Q9NR09 4857 aa2.56□□□□□ -2
RSF1-201ENST00000308488 DNHD1Q96M86 4753 aa2.53□□□□□ -2
RSF1-201ENST00000308488 HYDINQ4G0P3 5121 aa2.5□□□□□ -2.01
RSF1-201ENST00000308488 MT1HP80294 61 aa2.49□□□□□ -2.01
RSF1-201ENST00000308488 MT1GP13640 62 aa2.48□□□□□ -2.01
RSF1-201ENST00000308488 MT1LQ93083 61 aa2.46□□□□□ -2.02
RSF1-201ENST00000308488 LCE2DQ5TA82 110 aaPredicted RBP2.45□□□□□ -2.02
RSF1-201ENST00000308488 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
RSF1-201ENST00000308488 MUC17Q685J3 4493 aa2.44□□□□□ -2.02
RSF1-201ENST00000308488 PCLOQ9Y6V0 5065 aa2.42□□□□□ -2.02
RSF1-201ENST00000308488 KRTAP4-5Q9BYR2 181 aa2.42□□□□□ -2.02
RSF1-201ENST00000308488 LRP2P98164 4655 aa2.42□□□□□ -2.02
RSF1-201ENST00000308488 MT1BP07438 61 aa2.41□□□□□ -2.02
RSF1-201ENST00000308488 RYR3Q15413 4870 aa2.37□□□□□ -2.03
RSF1-201ENST00000308488 MT1EP04732 61 aa2.36□□□□□ -2.03
RSF1-201ENST00000308488 SPRR2FQ96RM1 72 aa2.35□□□□□ -2.03
RSF1-201ENST00000308488 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.04
RSF1-201ENST00000308488 MT1AP04731 61 aa2.32□□□□□ -2.04
RSF1-201ENST00000308488 KMT2CQ8NEZ4 4911 aaKnown RBP2.32□□□□□ -2.04
RSF1-201ENST00000308488 HERC1Q15751 4861 aa2.31□□□□□ -2.04
RSF1-201ENST00000308488 SPRR2AP35326 72 aa2.3□□□□□ -2.04
RSF1-201ENST00000308488 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
RSF1-201ENST00000308488 RYR2Q92736 4967 aa2.28□□□□□ -2.04
RSF1-201ENST00000308488 KRTAP4-7Q9BYR0 210 aa2.27□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP19-3Q7Z4W3 81 aa2.27□□□□□ -2.05
RSF1-201ENST00000308488 HERC2O95714 4834 aa2.27□□□□□ -2.05
RSF1-201ENST00000308488 SPRR2BP35325 72 aa2.26□□□□□ -2.05
RSF1-201ENST00000308488 MT1MQ8N339 61 aa2.23□□□□□ -2.05
RSF1-201ENST00000308488 UBR4Q5T4S7 5183 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP9-3Q9BYQ3 159 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP9-6A0A140TA67 174 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP9-8Q9BYQ0 159 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
RSF1-201ENST00000308488 LCE2CQ5TA81 110 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms