RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 APLNQ9ULZ1 77 aa1.14□□□□□ -2.23
DMD-201ENST00000288447 OTOGLQ3ZCN5 2332 aa1.13□□□□□ -2.23
DMD-201ENST00000288447 PCNX1Q96RV3 2341 aa1.13□□□□□ -2.23
DMD-201ENST00000288447 UBR5O95071 2799 aaPredicted RBP1.13□□□□□ -2.23
DMD-201ENST00000288447 CACNA1EQ15878 2313 aa1.13□□□□□ -2.23
DMD-201ENST00000288447 MYO9AB2RTY4 2548 aa1.13□□□□□ -2.23
DMD-201ENST00000288447 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.12□□□□□ -2.23
DMD-201ENST00000288447 CEP250Q9BV73 2442 aa1.12□□□□□ -2.23
DMD-201ENST00000288447 PTPRZ1P23471 2315 aaPredicted RBP1.12□□□□□ -2.23
DMD-201ENST00000288447 APOBP04114 4563 aaKnown RBP1.12□□□□□ -2.23
DMD-201ENST00000288447 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
DMD-201ENST00000288447 C2CD3Q4AC94 2353 aa1.12□□□□□ -2.23
DMD-201ENST00000288447 NF1P21359 2839 aa1.11□□□□□ -2.23
DMD-201ENST00000288447 DEFB1P60022 68 aa1.11□□□□□ -2.23
DMD-201ENST00000288447 CFAP46Q8IYW2 2715 aa1.11□□□□□ -2.23
DMD-201ENST00000288447 COL12A1Q99715 3063 aa1.1□□□□□ -2.23
DMD-201ENST00000288447 SYNE2Q8WXH0 6885 aaKnown RBP1.1□□□□□ -2.23
DMD-201ENST00000288447 DSPP15924 2871 aaKnown RBP1.1□□□□□ -2.23
DMD-201ENST00000288447 IGF2RP11717 2491 aa1.1□□□□□ -2.23
DMD-201ENST00000288447 HECTD1Q9ULT8 2610 aa1.1□□□□□ -2.23
DMD-201ENST00000288447 ITPR3Q14573 2671 aa1.09□□□□□ -2.23
DMD-201ENST00000288447 CRYBG3Q68DQ2 2970 aa1.09□□□□□ -2.23
DMD-201ENST00000288447 HERC1Q15751 4861 aa1.09□□□□□ -2.23
DMD-201ENST00000288447 CNTRLQ7Z7A1 2325 aa1.09□□□□□ -2.24
DMD-201ENST00000288447 LRBAP50851 2863 aa1.09□□□□□ -2.24
DMD-201ENST00000288447 LPAP08519 4548 aa1.09□□□□□ -2.24
DMD-201ENST00000288447 SMR3AQ99954 134 aa1.09□□□□□ -2.24
DMD-201ENST00000288447 AKAP13Q12802 2813 aa1.08□□□□□ -2.24
DMD-201ENST00000288447 AKAP6Q13023 2319 aa1.08□□□□□ -2.24
DMD-201ENST00000288447 FLNAP21333 2647 aaKnown RBP1.08□□□□□ -2.24
DMD-201ENST00000288447 SETD2Q9BYW2 2564 aaPredicted RBP1.08□□□□□ -2.24
DMD-201ENST00000288447 DYNC1H1Q14204 4646 aaKnown RBP1.08□□□□□ -2.24
DMD-201ENST00000288447 WNK2Q9Y3S1 2297 aa1.08□□□□□ -2.24
DMD-201ENST00000288447 C9orf92A6NGG3 77 aa1.07□□□□□ -2.24
DMD-201ENST00000288447 EP300Q09472 2414 aaPredicted RBP1.07□□□□□ -2.24
DMD-201ENST00000288447 SPG11Q96JI7 2443 aa1.07□□□□□ -2.24
DMD-201ENST00000288447 KRTAP8-1Q8IUC2 63 aa1.07□□□□□ -2.24
DMD-201ENST00000288447 U3KQA8 63 aa1.07□□□□□ -2.24
DMD-201ENST00000288447 TACC2O95359 2948 aa1.07□□□□□ -2.24
DMD-201ENST00000288447 WNK1Q9H4A3 2382 aa1.06□□□□□ -2.24
DMD-201ENST00000288447 CEP295Q9C0D2 2601 aa1.06□□□□□ -2.24
DMD-201ENST00000288447 SPTA1P02549 2419 aa1.06□□□□□ -2.24
DMD-201ENST00000288447 APELAP0DMC3 54 aa1.06□□□□□ -2.24
DMD-201ENST00000288447 LCE3DQ9BYE3 92 aa1.06□□□□□ -2.24
DMD-201ENST00000288447 ITPR2Q14571 2701 aa1.05□□□□□ -2.24
DMD-201ENST00000288447 POLQO75417 2590 aa1.05□□□□□ -2.24
DMD-201ENST00000288447 SPTAN1Q13813 2472 aaKnown RBP1.05□□□□□ -2.24
DMD-201ENST00000288447 ROS1P08922 2347 aa1.05□□□□□ -2.24
DMD-201ENST00000288447 LCE3AQ5TA76 89 aa1.05□□□□□ -2.24
DMD-201ENST00000288447 BIRC6Q9NR09 4857 aa1.04□□□□□ -2.24
DMD-201ENST00000288447 KRTAP9-6A8MVA2 160 aa1.04□□□□□ -2.24
DMD-201ENST00000288447 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
DMD-201ENST00000288447 STAB1Q9NY15 2570 aa1.04□□□□□ -2.24
DMD-201ENST00000288447 USP9YO00507 2555 aaPredicted RBP1.04□□□□□ -2.24
DMD-201ENST00000288447 KRTAP5-1Q6L8H4 278 aa1.04□□□□□ -2.24
DMD-201ENST00000288447 LINC01556Q5JQF7 62 aa1.03□□□□□ -2.24
DMD-201ENST00000288447 HIVEP1P15822 2718 aa1.03□□□□□ -2.24
DMD-201ENST00000288447 PKDREJQ9NTG1 2253 aa1.03□□□□□ -2.24
DMD-201ENST00000288447 RYR3Q15413 4870 aa1.03□□□□□ -2.24
DMD-201ENST00000288447 FLNCQ14315 2725 aa1.02□□□□□ -2.25
DMD-201ENST00000288447 CD52P31358 61 aa1.02□□□□□ -2.25
DMD-201ENST00000288447 TLN1Q9Y490 2541 aaKnown RBP1.02□□□□□ -2.25
DMD-201ENST00000288447 COL7A1Q02388 2944 aa1.02□□□□□ -2.25
DMD-201ENST00000288447 APCP25054 2843 aa1.02□□□□□ -2.25
DMD-201ENST00000288447 HRNRQ86YZ3 2850 aaPredicted RBP1.02□□□□□ -2.25
DMD-201ENST00000288447 UTP20O75691 2785 aaKnown RBP1.01□□□□□ -2.25
DMD-201ENST00000288447 PCLOQ9Y6V0 5065 aa1.01□□□□□ -2.25
DMD-201ENST00000288447 COL6A5A8TX70 2615 aa1.01□□□□□ -2.25
DMD-201ENST00000288447 FAT1Q14517 4588 aa1.01□□□□□ -2.25
DMD-201ENST00000288447 TNP1P09430 55 aa1□□□□□ -2.25
DMD-201ENST00000288447 DEFB110Q30KQ9 67 aa1□□□□□ -2.25
DMD-201ENST00000288447 KMT2CQ8NEZ4 4911 aaKnown RBP1□□□□□ -2.25
DMD-201ENST00000288447 NIPBLQ6KC79 2804 aaeCLIP1□□□□□ -2.25
DMD-201ENST00000288447 KNL1Q8NG31 2342 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 MUC17Q685J3 4493 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 SPINK1P00995 79 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 ATRQ13535 2644 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 APC2O95996 2303 aa0.99□□□□□ -2.25
DMD-201ENST00000288447 KRTAP4-3Q9BYR4 195 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 ACACAQ13085 2346 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 HYDINQ4G0P3 5121 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 A0A096LPF7 62 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 PKD1L1Q8TDX9 2849 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 CCDC168Q8NDH2 2452 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 NBEAL1Q6ZS30 2694 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 MTORP42345 2549 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 EPPK1P58107 5090 aaKnown RBP0.98□□□□□ -2.25
DMD-201ENST00000288447 HERC2O95714 4834 aa0.98□□□□□ -2.25
DMD-201ENST00000288447 KRTAP5-5Q701N2 237 aaPredicted RBP0.97□□□□□ -2.25
DMD-201ENST00000288447 CENPEQ02224 2701 aa0.96□□□□□ -2.26
DMD-201ENST00000288447 MT1AP04731 61 aa0.96□□□□□ -2.26
DMD-201ENST00000288447 KRTAP19-5Q3LI72 72 aa0.96□□□□□ -2.26
DMD-201ENST00000288447 LRP1BQ9NZR2 4599 aa0.96□□□□□ -2.26
DMD-201ENST00000288447 KRTAP5-8O75690 187 aa0.96□□□□□ -2.26
DMD-201ENST00000288447 NSD1Q96L73 2696 aaPredicted RBP0.96□□□□□ -2.26
DMD-201ENST00000288447 MAP1AP78559 2803 aaPredicted RBP0.95□□□□□ -2.26
DMD-201ENST00000288447 MXRA5Q9NR99 2828 aa0.95□□□□□ -2.26
DMD-201ENST00000288447 RYR2Q92736 4967 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms