RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 CFAP46Q8IYW2 2715 aa2.93□□□□□ -1.94
LSM1P2-201ENST00000604911 CACNA1HO95180 2353 aa2.93□□□□□ -1.94
LSM1P2-201ENST00000604911 BRD3OSQ6XYD6 125 aa2.93□□□□□ -1.94
LSM1P2-201ENST00000604911 MGAQ8IWI9 3026 aa2.93□□□□□ -1.94
LSM1P2-201ENST00000604911 ITPR3Q14573 2671 aa2.92□□□□□ -1.94
LSM1P2-201ENST00000604911 RIF1Q5UIP0 2472 aaKnown RBP2.92□□□□□ -1.94
LSM1P2-201ENST00000604911 SPTBN2O15020 2390 aa2.92□□□□□ -1.94
LSM1P2-201ENST00000604911 CEP250Q9BV73 2442 aa2.92□□□□□ -1.94
LSM1P2-201ENST00000604911 PTPRZ1P23471 2315 aaPredicted RBP2.91□□□□□ -1.94
LSM1P2-201ENST00000604911 IGSF10Q6WRI0 2623 aa2.9□□□□□ -1.94
LSM1P2-201ENST00000604911 ABCA12Q86UK0 2595 aa2.89□□□□□ -1.95
LSM1P2-201ENST00000604911 SPINK1P00995 79 aa2.89□□□□□ -1.95
LSM1P2-201ENST00000604911 MYO9AB2RTY4 2548 aa2.89□□□□□ -1.95
LSM1P2-201ENST00000604911 DSPP15924 2871 aaKnown RBP2.89□□□□□ -1.95
LSM1P2-201ENST00000604911 PCNX1Q96RV3 2341 aa2.88□□□□□ -1.95
LSM1P2-201ENST00000604911 FREM2Q5SZK8 3169 aa2.88□□□□□ -1.95
LSM1P2-201ENST00000604911 UBR5O95071 2799 aaPredicted RBP2.88□□□□□ -1.95
LSM1P2-201ENST00000604911 DEFB136Q30KP8 78 aa2.87□□□□□ -1.95
LSM1P2-201ENST00000604911 PIEZO2Q9H5I5 2752 aa2.86□□□□□ -1.95
LSM1P2-201ENST00000604911 S4R3F8 94 aa2.86□□□□□ -1.95
LSM1P2-201ENST00000604911 C2CD3Q4AC94 2353 aa2.85□□□□□ -1.95
LSM1P2-201ENST00000604911 AKAP13Q12802 2813 aa2.85□□□□□ -1.95
LSM1P2-201ENST00000604911 AKAP6Q13023 2319 aa2.85□□□□□ -1.95
LSM1P2-201ENST00000604911 KALRNO60229 2985 aa2.85□□□□□ -1.95
LSM1P2-201ENST00000604911 CEP295Q9C0D2 2601 aa2.84□□□□□ -1.95
LSM1P2-201ENST00000604911 DMXL2Q8TDJ6 3036 aa2.84□□□□□ -1.95
LSM1P2-201ENST00000604911 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.96
LSM1P2-201ENST00000604911 ACACAQ13085 2346 aa2.84□□□□□ -1.96
LSM1P2-201ENST00000604911 COL12A1Q99715 3063 aa2.83□□□□□ -1.96
LSM1P2-201ENST00000604911 OTOGLQ3ZCN5 2332 aa2.83□□□□□ -1.96
LSM1P2-201ENST00000604911 FN1P02751 2386 aaKnown RBP2.83□□□□□ -1.96
LSM1P2-201ENST00000604911 EP300Q09472 2414 aaPredicted RBP2.83□□□□□ -1.96
LSM1P2-201ENST00000604911 LAMA5O15230 3695 aa2.83□□□□□ -1.96
LSM1P2-201ENST00000604911 SPRR5A0A1B0GTR4 108 aa2.82□□□□□ -1.96
LSM1P2-201ENST00000604911 NF1P21359 2839 aa2.82□□□□□ -1.96
LSM1P2-201ENST00000604911 SPTA1P02549 2419 aa2.81□□□□□ -1.96
LSM1P2-201ENST00000604911 APLNQ9ULZ1 77 aa2.81□□□□□ -1.96
LSM1P2-201ENST00000604911 NBPF19A0A087WUL8 3843 aa2.81□□□□□ -1.96
LSM1P2-201ENST00000604911 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
LSM1P2-201ENST00000604911 POLQO75417 2590 aa2.78□□□□□ -1.96
LSM1P2-201ENST00000604911 SPTAN1Q13813 2472 aaKnown RBP2.78□□□□□ -1.96
LSM1P2-201ENST00000604911 U3KQA8 63 aa2.77□□□□□ -1.97
LSM1P2-201ENST00000604911 PKDREJQ9NTG1 2253 aa2.76□□□□□ -1.97
LSM1P2-201ENST00000604911 FBN1P35555 2871 aaKnown RBP2.76□□□□□ -1.97
LSM1P2-201ENST00000604911 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
LSM1P2-201ENST00000604911 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
LSM1P2-201ENST00000604911 A0A096LPF7 62 aa2.75□□□□□ -1.97
LSM1P2-201ENST00000604911 H3BNG1 76 aa2.75□□□□□ -1.97
LSM1P2-201ENST00000604911 SPENQ96T58 3664 aaKnown RBP2.75□□□□□ -1.97
LSM1P2-201ENST00000604911 SPG11Q96JI7 2443 aa2.74□□□□□ -1.97
LSM1P2-201ENST00000604911 KRTAP21-3Q3LHN1 58 aa2.74□□□□□ -1.97
LSM1P2-201ENST00000604911 TENM2Q9NT68 2774 aa2.73□□□□□ -1.97
LSM1P2-201ENST00000604911 A0A0D9SG42 100 aa2.73□□□□□ -1.97
LSM1P2-201ENST00000604911 Q5VSD8 79 aa2.73□□□□□ -1.97
LSM1P2-201ENST00000604911 UTP20O75691 2785 aaKnown RBP2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 CELSR1Q9NYQ6 3014 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 TLN1Q9Y490 2541 aaKnown RBP2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 KRTAP10-1P60331 282 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 DEFB103AP81534 67 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 KRTAP13-2Q52LG2 175 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 LRBAP50851 2863 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 SETD2Q9BYW2 2564 aaPredicted RBP2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
LSM1P2-201ENST00000604911 BOD1L1Q8NFC6 3051 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 OTOGQ6ZRI0 2925 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 A0A096LNI7 61 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 LINC01556Q5JQF7 62 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 KRTAP13-1Q8IUC0 172 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 APC2O95996 2303 aa2.71□□□□□ -1.98
LSM1P2-201ENST00000604911 CSMD1Q96PZ7 3565 aa2.7□□□□□ -1.98
LSM1P2-201ENST00000604911 ATMQ13315 3056 aa2.69□□□□□ -1.98
LSM1P2-201ENST00000604911 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
LSM1P2-201ENST00000604911 DEFB124Q8NES8 71 aa2.69□□□□□ -1.98
LSM1P2-201ENST00000604911 ADGRG4Q8IZF6 3080 aa2.68□□□□□ -1.98
LSM1P2-201ENST00000604911 J3QKU1 62 aa2.68□□□□□ -1.98
LSM1P2-201ENST00000604911 SPINK6Q6UWN8 80 aa2.68□□□□□ -1.98
LSM1P2-201ENST00000604911 PDZD2O15018 2839 aa2.68□□□□□ -1.98
LSM1P2-201ENST00000604911 CSPG4Q6UVK1 2322 aa2.67□□□□□ -1.98
LSM1P2-201ENST00000604911 ITPR2Q14571 2701 aa2.67□□□□□ -1.98
LSM1P2-201ENST00000604911 ABCA2Q9BZC7 2435 aa2.67□□□□□ -1.98
LSM1P2-201ENST00000604911 M0QZ58 72 aa2.66□□□□□ -1.98
LSM1P2-201ENST00000604911 LAMA1P25391 3075 aa2.66□□□□□ -1.98
LSM1P2-201ENST00000604911 FLNCQ14315 2725 aa2.66□□□□□ -1.98
LSM1P2-201ENST00000604911 RYR3Q15413 4870 aa2.66□□□□□ -1.98
LSM1P2-201ENST00000604911 ROS1P08922 2347 aa2.65□□□□□ -1.98
LSM1P2-201ENST00000604911 LRRK2Q5S007 2527 aa2.65□□□□□ -1.99
LSM1P2-201ENST00000604911 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.99
LSM1P2-201ENST00000604911 CREBBPQ92793 2442 aa2.65□□□□□ -1.99
LSM1P2-201ENST00000604911 F8P00451 2351 aa2.64□□□□□ -1.99
LSM1P2-201ENST00000604911 AKAP9Q99996 3911 aa2.64□□□□□ -1.99
LSM1P2-201ENST00000604911 CSMD2Q7Z408 3487 aa2.62□□□□□ -1.99
LSM1P2-201ENST00000604911 PCLOQ9Y6V0 5065 aa2.62□□□□□ -1.99
LSM1P2-201ENST00000604911 CRYBG3Q68DQ2 2970 aa2.61□□□□□ -1.99
LSM1P2-201ENST00000604911 HIVEP1P15822 2718 aa2.61□□□□□ -1.99
LSM1P2-201ENST00000604911 USP9YO00507 2555 aaPredicted RBP2.61□□□□□ -1.99
LSM1P2-201ENST00000604911 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
LSM1P2-201ENST00000604911 JMJD1CQ15652 2540 aa2.61□□□□□ -1.99
LSM1P2-201ENST00000604911 ATRQ13535 2644 aa2.6□□□□□ -1.99
LSM1P2-201ENST00000604911 HIVEP3Q5T1R4 2406 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms