RNA–Protein interactions for RNA: ENST00000534336.1

MALAT1-202, metastasis associated lung adenocarcinoma transcript 1, humanhuman

BASIC

Gene MALAT1, Length 8,708 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-202ENST00000534336 KRTAP10-1P60331 282 aa5.19□□□□□ -1.58
MALAT1-202ENST00000534336 ZZEF1O43149 2961 aa5.17□□□□□ -1.58
MALAT1-202ENST00000534336 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
MALAT1-202ENST00000534336 HTTP42858 3142 aa5.17□□□□□ -1.58
MALAT1-202ENST00000534336 MKI67P46013 3256 aaKnown RBP5.14□□□□□ -1.59
MALAT1-202ENST00000534336 TNRC18O15417 2968 aaPredicted RBP5.13□□□□□ -1.59
MALAT1-202ENST00000534336 PRUNE2Q8WUY3 3088 aa5.13□□□□□ -1.59
MALAT1-202ENST00000534336 KRTAP10-2P60368 255 aa5.13□□□□□ -1.59
MALAT1-202ENST00000534336 NF1P21359 2839 aa5.12□□□□□ -1.59
MALAT1-202ENST00000534336 TGP01266 2768 aa5.11□□□□□ -1.59
MALAT1-202ENST00000534336 BRCA2P51587 3418 aa5.1□□□□□ -1.59
MALAT1-202ENST00000534336 Q6ZRN7 208 aaPredicted RBP5.1□□□□□ -1.59
MALAT1-202ENST00000534336 KRTAP1-3Q8IUG1 177 aa5.1□□□□□ -1.59
MALAT1-202ENST00000534336 NBEAQ8NFP9 2946 aa5.1□□□□□ -1.59
MALAT1-202ENST00000534336 INE1O15225 51 aa5.09□□□□□ -1.59
MALAT1-202ENST00000534336 TACC2O95359 2948 aa5.09□□□□□ -1.59
MALAT1-202ENST00000534336 DMXL1Q9Y485 3027 aa5.09□□□□□ -1.6
MALAT1-202ENST00000534336 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.6
MALAT1-202ENST00000534336 ATMQ13315 3056 aa5.08□□□□□ -1.6
MALAT1-202ENST00000534336 HIVEP1P15822 2718 aa5.07□□□□□ -1.6
MALAT1-202ENST00000534336 ADGRG4Q8IZF6 3080 aa5.07□□□□□ -1.6
MALAT1-202ENST00000534336 PDZD2O15018 2839 aa5.07□□□□□ -1.6
MALAT1-202ENST00000534336 NIPBLQ6KC79 2804 aaeCLIP5.06□□□□□ -1.6not detected■□□□□ 8.7
MALAT1-202ENST00000534336 COL6A3P12111 3177 aa5.05□□□□□ -1.6
MALAT1-202ENST00000534336 CELSR1Q9NYQ6 3014 aa5.05□□□□□ -1.6
MALAT1-202ENST00000534336 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
MALAT1-202ENST00000534336 H0YAA0 97 aa5.02□□□□□ -1.61
MALAT1-202ENST00000534336 LAMA3Q16787 3333 aa5.02□□□□□ -1.61
MALAT1-202ENST00000534336 SPEGQ15772 3267 aa5□□□□□ -1.61
MALAT1-202ENST00000534336 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
MALAT1-202ENST00000534336 CELSR2Q9HCU4 2923 aa4.96□□□□□ -1.62
MALAT1-202ENST00000534336 DCHS2Q6V1P9 2916 aa4.95□□□□□ -1.62
MALAT1-202ENST00000534336 SZT2Q5T011 3432 aa4.95□□□□□ -1.62
MALAT1-202ENST00000534336 ZFHX4Q86UP3 3567 aa4.94□□□□□ -1.62
MALAT1-202ENST00000534336 NBPF19A0A087WUL8 3843 aa4.93□□□□□ -1.62
MALAT1-202ENST00000534336 WDFY3Q8IZQ1 3526 aa4.92□□□□□ -1.62
MALAT1-202ENST00000534336 FLNCQ14315 2725 aa4.9□□□□□ -1.62
MALAT1-202ENST00000534336 CFAP47Q6ZTR5 3102 aa4.9□□□□□ -1.63
MALAT1-202ENST00000534336 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
MALAT1-202ENST00000534336 VCANP13611 3396 aa4.89□□□□□ -1.63
MALAT1-202ENST00000534336 SPTBN5Q9NRC6 3674 aaKnown RBP4.88□□□□□ -1.63
MALAT1-202ENST00000534336 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
MALAT1-202ENST00000534336 CDH23Q9H251 3354 aa4.87□□□□□ -1.63
MALAT1-202ENST00000534336 LAMA5O15230 3695 aa4.86□□□□□ -1.63
MALAT1-202ENST00000534336 TENM4Q6N022 2769 aa4.86□□□□□ -1.63
MALAT1-202ENST00000534336 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
MALAT1-202ENST00000534336 KRTAP13-1Q8IUC0 172 aa4.85□□□□□ -1.63
MALAT1-202ENST00000534336 A0A1B0GVY2 172 aa4.83□□□□□ -1.64
MALAT1-202ENST00000534336 KRTAP12-2P59991 146 aa4.83□□□□□ -1.64
MALAT1-202ENST00000534336 ZANQ9Y493 2812 aa4.83□□□□□ -1.64
MALAT1-202ENST00000534336 ASPMQ8IZT6 3477 aa4.82□□□□□ -1.64
MALAT1-202ENST00000534336 HRNRQ86YZ3 2850 aaPredicted RBP4.8□□□□□ -1.64
MALAT1-202ENST00000534336 TPRXLQ17RH7 258 aa4.8□□□□□ -1.64
MALAT1-202ENST00000534336 XP32Q5T750 250 aa4.8□□□□□ -1.64
MALAT1-202ENST00000534336 OTOGQ6ZRI0 2925 aa4.79□□□□□ -1.64
MALAT1-202ENST00000534336 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
MALAT1-202ENST00000534336 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
MALAT1-202ENST00000534336 LOC400499M0QZD8 3231 aa4.76□□□□□ -1.65
MALAT1-202ENST00000534336 VWFP04275 2813 aa4.73□□□□□ -1.65
MALAT1-202ENST00000534336 COL7A1Q02388 2944 aa4.72□□□□□ -1.65
MALAT1-202ENST00000534336 RELNP78509 3460 aa4.72□□□□□ -1.65
MALAT1-202ENST00000534336 DMDP11532 3685 aa4.72□□□□□ -1.65
MALAT1-202ENST00000534336 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
MALAT1-202ENST00000534336 SMG1Q96Q15 3661 aaKnown RBP4.69□□□□□ -1.66
MALAT1-202ENST00000534336 DCHS1Q96JQ0 3298 aa4.68□□□□□ -1.66
MALAT1-202ENST00000534336 MXRA5Q9NR99 2828 aa4.68□□□□□ -1.66
MALAT1-202ENST00000534336 AKAP9Q99996 3911 aa4.67□□□□□ -1.66
MALAT1-202ENST00000534336 MYO15AQ9UKN7 3530 aa4.67□□□□□ -1.66
MALAT1-202ENST00000534336 KRTAP7-1Q8IUC3 87 aa4.67□□□□□ -1.66
MALAT1-202ENST00000534336 FBN2P35556 2912 aa4.67□□□□□ -1.66
MALAT1-202ENST00000534336 MEGF8Q7Z7M0 2845 aa4.64□□□□□ -1.67
MALAT1-202ENST00000534336 PKD1L1Q8TDX9 2849 aa4.62□□□□□ -1.67
MALAT1-202ENST00000534336 EYSQ5T1H1 3165 aa4.62□□□□□ -1.67
MALAT1-202ENST00000534336 CSMD1Q96PZ7 3565 aa4.56□□□□□ -1.68
MALAT1-202ENST00000534336 KRTAP13-3Q3SY46 172 aa4.54□□□□□ -1.68
MALAT1-202ENST00000534336 KRTAP12-1P59990 96 aa4.53□□□□□ -1.68
MALAT1-202ENST00000534336 VPS13CQ709C8 3753 aa4.53□□□□□ -1.68
MALAT1-202ENST00000534336 KRTAP1-4P0C5Y4 121 aa4.51□□□□□ -1.69
MALAT1-202ENST00000534336 KRTAP21-3Q3LHN1 58 aa4.42□□□□□ -1.7
MALAT1-202ENST00000534336 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
MALAT1-202ENST00000534336 ALMS1Q8TCU4 4167 aa4.37□□□□□ -1.71
MALAT1-202ENST00000534336 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
MALAT1-202ENST00000534336 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
MALAT1-202ENST00000534336 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
MALAT1-202ENST00000534336 KRTAP10-6P60371 365 aaPredicted RBP4.32□□□□□ -1.72
MALAT1-202ENST00000534336 CSMD3Q7Z407 3707 aa4.31□□□□□ -1.72
MALAT1-202ENST00000534336 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
MALAT1-202ENST00000534336 FBN3Q75N90 2809 aa4.26□□□□□ -1.73
MALAT1-202ENST00000534336 CUBNO60494 3623 aa4.24□□□□□ -1.73
MALAT1-202ENST00000534336 LYSTQ99698 3801 aa4.23□□□□□ -1.73
MALAT1-202ENST00000534336 CSMD2Q7Z408 3487 aa4.2□□□□□ -1.74
MALAT1-202ENST00000534336 SVEP1Q4LDE5 3571 aa4.2□□□□□ -1.74
MALAT1-202ENST00000534336 MUC3AQ02505 3323 aa4.19□□□□□ -1.74
MALAT1-202ENST00000534336 BSNQ9UPA5 3926 aa4.16□□□□□ -1.74
MALAT1-202ENST00000534336 KRTAP12-3P60328 96 aa4.16□□□□□ -1.74
MALAT1-202ENST00000534336 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
MALAT1-202ENST00000534336 DNAH3Q8TD57 4116 aa4.1□□□□□ -1.75
MALAT1-202ENST00000534336 ANK2Q01484 3957 aa4.07□□□□□ -1.76
MALAT1-202ENST00000534336 MT3P25713 68 aa4.07□□□□□ -1.76
MALAT1-202ENST00000534336 DNAH7Q8WXX0 4024 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms