RNA–Protein interactions for RNA: ENST00000533701.1

AP004242.1-201, humanhuman

BASIC

Gene AP004242.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004242.1-201ENST00000533701 CHD9Q3L8U1 2897 aa1.23□□□□□ -2.21
AP004242.1-201ENST00000533701 MEGF8Q7Z7M0 2845 aa1.23□□□□□ -2.21
AP004242.1-201ENST00000533701 C5orf42Q9H799 3197 aa1.22□□□□□ -2.21
AP004242.1-201ENST00000533701 XIRP2A4UGR9 3374 aa1.22□□□□□ -2.21
AP004242.1-201ENST00000533701 ANKHD1Q8IWZ3 2542 aaKnown RBP1.22□□□□□ -2.21
AP004242.1-201ENST00000533701 MAST4O15021 2626 aa1.22□□□□□ -2.21
AP004242.1-201ENST00000533701 ZZEF1O43149 2961 aa1.21□□□□□ -2.22
AP004242.1-201ENST00000533701 CEP290O15078 2479 aa1.21□□□□□ -2.22
AP004242.1-201ENST00000533701 USP34Q70CQ2 3546 aa1.21□□□□□ -2.22
AP004242.1-201ENST00000533701 PRUNE2Q8WUY3 3088 aa1.21□□□□□ -2.22
AP004242.1-201ENST00000533701 CFAP54Q96N23 3096 aa1.21□□□□□ -2.22
AP004242.1-201ENST00000533701 DNHD1Q96M86 4753 aa1.2□□□□□ -2.22
AP004242.1-201ENST00000533701 SPINK6Q6UWN8 80 aa1.2□□□□□ -2.22
AP004242.1-201ENST00000533701 DCHS1Q96JQ0 3298 aa1.2□□□□□ -2.22
AP004242.1-201ENST00000533701 CHD6Q8TD26 2715 aa1.2□□□□□ -2.22
AP004242.1-201ENST00000533701 WDFY3Q8IZQ1 3526 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 VPS13AQ96RL7 3174 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 LAMA3Q16787 3333 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 ACACAQ13085 2346 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 SPTAN1Q13813 2472 aaKnown RBP1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 UBR4Q5T4S7 5183 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 ASPMQ8IZT6 3477 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 USP9XQ93008 2570 aaPredicted RBP1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 CREBBPQ92793 2442 aa1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 TEP1Q99973 2627 aaKnown RBP1.19□□□□□ -2.22
AP004242.1-201ENST00000533701 CSPG4Q6UVK1 2322 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 DSPP15924 2871 aaKnown RBP1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 FLNBO75369 2602 aaKnown RBP1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 SPINK1P00995 79 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 SPTA1P02549 2419 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 NBASA2RRP1 2371 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 BDP1A6H8Y1 2624 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 USP24Q9UPU5 2620 aa1.18□□□□□ -2.22
AP004242.1-201ENST00000533701 CDH23Q9H251 3354 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 CELSR3Q9NYQ7 3312 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 ANKRD11Q6UB99 2663 aaPredicted RBP1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 SPEGQ15772 3267 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 WDFY4Q6ZS81 3184 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 HIVEP2P31629 2446 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 FASNP49327 2511 aaKnown RBP1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 TRIOO75962 3097 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 ZNF292O60281 2723 aa1.17□□□□□ -2.22
AP004242.1-201ENST00000533701 PTPN13Q12923 2485 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 NAV2Q8IVL1 2488 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 SPG11Q96JI7 2443 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 FREM2Q5SZK8 3169 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 FBN3Q75N90 2809 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 PIEZO1Q92508 2521 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 CSMD1Q96PZ7 3565 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 NBEAQ8NFP9 2946 aa1.16□□□□□ -2.22
AP004242.1-201ENST00000533701 TTC28Q96AY4 2481 aa1.15□□□□□ -2.22
AP004242.1-201ENST00000533701 EPG5Q9HCE0 2579 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 FRYLO94915 3013 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 HIVEP3Q5T1R4 2406 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 KRTAP4-1Q9BYQ7 146 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 KALRNO60229 2985 aa1.14□□□□□ -2.23
AP004242.1-201ENST00000533701 MGAQ8IWI9 3026 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 CSMD3Q7Z407 3707 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 GVINP1Q7Z2Y8 2422 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 RELNP78509 3460 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 FRYQ5TBA9 3013 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 MYO18BQ8IUG5 2567 aa1.13□□□□□ -2.23
AP004242.1-201ENST00000533701 MYO15AQ9UKN7 3530 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 F8P00451 2351 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 DMDP11532 3685 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 ITPR3Q14573 2671 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 LAMA1P25391 3075 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 ABCA12Q86UK0 2595 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 DOPEY1Q5JWR5 2465 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 CELSR2Q9HCU4 2923 aa1.12□□□□□ -2.23
AP004242.1-201ENST00000533701 DNAH11Q96DT5 4516 aa1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 GCN1Q92616 2671 aaKnown RBP1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 CRCT1Q9UGL9 99 aa1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 BSNQ9UPA5 3926 aa1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 VPS13DQ5THJ4 4388 aa1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 SMG1Q96Q15 3661 aaKnown RBP1.11□□□□□ -2.23
AP004242.1-201ENST00000533701 SPENQ96T58 3664 aaKnown RBP1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 ANK2Q01484 3957 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 DMXL2Q8TDJ6 3036 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 CELSR1Q9NYQ6 3014 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 RPS29P62273 56 aaKnown RBP1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 MYCBP2O75592 4640 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 NCOR2Q9Y618 2525 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 PRRC2CQ9Y520 2896 aaKnown RBP1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 LOC400499M0QZD8 3231 aa1.1□□□□□ -2.23
AP004242.1-201ENST00000533701 POLQO75417 2590 aa1.09□□□□□ -2.23
AP004242.1-201ENST00000533701 SPTBN4Q9H254 2564 aa1.09□□□□□ -2.23
AP004242.1-201ENST00000533701 HECTD1Q9ULT8 2610 aa1.09□□□□□ -2.23
AP004242.1-201ENST00000533701 PRKDCP78527 4128 aaKnown RBP1.09□□□□□ -2.23
AP004242.1-201ENST00000533701 SMR3AQ99954 134 aa1.09□□□□□ -2.23
AP004242.1-201ENST00000533701 HRNRQ86YZ3 2850 aaPredicted RBP1.09□□□□□ -2.24
AP004242.1-201ENST00000533701 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.24
AP004242.1-201ENST00000533701 TLN2Q9Y4G6 2542 aa1.09□□□□□ -2.24
AP004242.1-201ENST00000533701 SACSQ9NZJ4 4579 aa1.08□□□□□ -2.24
AP004242.1-201ENST00000533701 FBN2P35556 2912 aa1.08□□□□□ -2.24
AP004242.1-201ENST00000533701 ITPR1Q14643 2758 aa1.08□□□□□ -2.24
AP004242.1-201ENST00000533701 ADGRG4Q8IZF6 3080 aa1.07□□□□□ -2.24
AP004242.1-201ENST00000533701 BOD1L1Q8NFC6 3051 aa1.07□□□□□ -2.24
AP004242.1-201ENST00000533701 RIF1Q5UIP0 2472 aaKnown RBP1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms