RNA–Protein interactions for RNA: ENST00000533701.1

AP004242.1-201, humanhuman

BASIC

Gene AP004242.1, Length 349 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004242.1-201ENST00000533701 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
AP004242.1-201ENST00000533701 CHIC1Q5VXU3 224 aa15.4■□□□□ 0.06
AP004242.1-201ENST00000533701 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
AP004242.1-201ENST00000533701 POTEDQ86YR6 584 aa14.02□□□□□ -0.17
AP004242.1-201ENST00000533701 PHF23Q9BUL5 403 aaPredicted RBP13.97□□□□□ -0.17
AP004242.1-201ENST00000533701 FOXD1Q16676 465 aa13.44□□□□□ -0.26
AP004242.1-201ENST00000533701 MSH5O43196 834 aa12.9□□□□□ -0.34
AP004242.1-201ENST00000533701 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
AP004242.1-201ENST00000533701 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
AP004242.1-201ENST00000533701 ADRA2BP18089 450 aa11.95□□□□□ -0.5
AP004242.1-201ENST00000533701 CACNB1Q02641 598 aaPredicted RBP11.63□□□□□ -0.55
AP004242.1-201ENST00000533701 PLPPR3Q6T4P5 718 aa11.57□□□□□ -0.56
AP004242.1-201ENST00000533701 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
AP004242.1-201ENST00000533701 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
AP004242.1-201ENST00000533701 POTEHQ6S545 545 aa10.86□□□□□ -0.67
AP004242.1-201ENST00000533701 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
AP004242.1-201ENST00000533701 SCAF1Q9H7N4 1312 aaKnown RBP10.8□□□□□ -0.68
AP004242.1-201ENST00000533701 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
AP004242.1-201ENST00000533701 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
AP004242.1-201ENST00000533701 HOXD11P31277 338 aaPredicted RBP10.46□□□□□ -0.73
AP004242.1-201ENST00000533701 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
AP004242.1-201ENST00000533701 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
AP004242.1-201ENST00000533701 PPP4R3CPQ6ZMV5 832 aa10.13□□□□□ -0.79
AP004242.1-201ENST00000533701 CNKSR2Q8WXI2 1034 aa10.04□□□□□ -0.8
AP004242.1-201ENST00000533701 DSG3P32926 999 aa9.93□□□□□ -0.82
AP004242.1-201ENST00000533701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.91□□□□□ -0.82
AP004242.1-201ENST00000533701 SPINK5Q9NQ38 1064 aaPredicted RBP9.86□□□□□ -0.83
AP004242.1-201ENST00000533701 CAPN15O75808 1086 aa9.76□□□□□ -0.85
AP004242.1-201ENST00000533701 SP7Q8TDD2 431 aaPredicted RBP9.75□□□□□ -0.85
AP004242.1-201ENST00000533701 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
AP004242.1-201ENST00000533701 CHRDL2Q6WN34 429 aa9.6□□□□□ -0.87
AP004242.1-201ENST00000533701 ABCB7O75027 752 aa9.55□□□□□ -0.88
AP004242.1-201ENST00000533701 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
AP004242.1-201ENST00000533701 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
AP004242.1-201ENST00000533701 NPM3O75607 178 aaKnown RBP9.42□□□□□ -0.9
AP004242.1-201ENST00000533701 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
AP004242.1-201ENST00000533701 APLP2Q06481 763 aa9.35□□□□□ -0.91
AP004242.1-201ENST00000533701 NCBP3Q53F19 620 aaKnown RBP9.34□□□□□ -0.91
AP004242.1-201ENST00000533701 ZNF219Q9P2Y4 722 aaPredicted RBP9.34□□□□□ -0.91
AP004242.1-201ENST00000533701 HAX1O00165 279 aa9.31□□□□□ -0.92
AP004242.1-201ENST00000533701 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
AP004242.1-201ENST00000533701 EVX2Q03828 476 aa9.21□□□□□ -0.94
AP004242.1-201ENST00000533701 PIP4P2Q8N4L2 257 aa9.19□□□□□ -0.94
AP004242.1-201ENST00000533701 LHX8Q68G74 356 aa9.15□□□□□ -0.94
AP004242.1-201ENST00000533701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.06□□□□□ -0.96
AP004242.1-201ENST00000533701 HNRNPUL2Q1KMD3 747 aaKnown RBP9.06□□□□□ -0.96
AP004242.1-201ENST00000533701 AKT1S1Q96B36 256 aa9.06□□□□□ -0.96
AP004242.1-201ENST00000533701 POLA2Q14181 598 aa9.04□□□□□ -0.96
AP004242.1-201ENST00000533701 REM2Q8IYK8 340 aaPredicted RBP9.01□□□□□ -0.97
AP004242.1-201ENST00000533701 FXR2P51116 673 aaKnown RBP eCLIP8.99□□□□□ -0.97
AP004242.1-201ENST00000533701 PITPNM1O00562 1244 aa8.95□□□□□ -0.98
AP004242.1-201ENST00000533701 SAMD1Q6SPF0 538 aaPredicted RBP8.92□□□□□ -0.98
AP004242.1-201ENST00000533701 GABBR2O75899 941 aa8.81□□□□□ -1
AP004242.1-201ENST00000533701 OSCARQ8IYS5 282 aa8.8□□□□□ -1
AP004242.1-201ENST00000533701 C19orf67A6NJJ6 358 aa8.73□□□□□ -1.01
AP004242.1-201ENST00000533701 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
AP004242.1-201ENST00000533701 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
AP004242.1-201ENST00000533701 ATF5Q9Y2D1 282 aaPredicted RBP8.7□□□□□ -1.02
AP004242.1-201ENST00000533701 POTEMA6NI47 508 aa8.67□□□□□ -1.02
AP004242.1-201ENST00000533701 PRKAR2AP13861 404 aaKnown RBP8.67□□□□□ -1.02
AP004242.1-201ENST00000533701 PCDH10Q9P2E7 1040 aa8.67□□□□□ -1.02
AP004242.1-201ENST00000533701 KCNA4P22459 653 aa8.62□□□□□ -1.03
AP004242.1-201ENST00000533701 MYCNP04198 464 aaPredicted RBP8.6□□□□□ -1.03
AP004242.1-201ENST00000533701 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
AP004242.1-201ENST00000533701 CHADLQ6NUI6 762 aa8.51□□□□□ -1.05
AP004242.1-201ENST00000533701 CLCN6P51797 869 aa8.49□□□□□ -1.05
AP004242.1-201ENST00000533701 CLEC11AQ9Y240 323 aa8.49□□□□□ -1.05
AP004242.1-201ENST00000533701 OTUD5Q96G74 571 aa8.48□□□□□ -1.05
AP004242.1-201ENST00000533701 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
AP004242.1-201ENST00000533701 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
AP004242.1-201ENST00000533701 SPDYE1Q8NFV5 336 aaPredicted RBP8.43□□□□□ -1.06
AP004242.1-201ENST00000533701 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
AP004242.1-201ENST00000533701 SPDYE2BA6NHP3 402 aa8.36□□□□□ -1.07
AP004242.1-201ENST00000533701 SPDYE6P0CI01 402 aa8.36□□□□□ -1.07
AP004242.1-201ENST00000533701 SPDYE2Q495Y8 402 aa8.36□□□□□ -1.07
AP004242.1-201ENST00000533701 CD44P16070 742 aaKnown RBP8.34□□□□□ -1.07
AP004242.1-201ENST00000533701 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
AP004242.1-201ENST00000533701 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
AP004242.1-201ENST00000533701 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
AP004242.1-201ENST00000533701 MKRN4PQ13434 485 aaPredicted RBP8.22□□□□□ -1.09
AP004242.1-201ENST00000533701 POTEJP0CG39 1038 aa8.21□□□□□ -1.1
AP004242.1-201ENST00000533701 FARP1Q9Y4F1 1045 aaPredicted RBP8.21□□□□□ -1.1
AP004242.1-201ENST00000533701 PRR29P0C7W0 189 aa8.19□□□□□ -1.1
AP004242.1-201ENST00000533701 FAM163AQ96GL9 167 aaPredicted RBP8.19□□□□□ -1.1
AP004242.1-201ENST00000533701 ZNF692Q9BU19 519 aaPredicted RBP8.19□□□□□ -1.1
AP004242.1-201ENST00000533701 PELP1Q8IZL8 1130 aaKnown RBP8.18□□□□□ -1.1
AP004242.1-201ENST00000533701 MAMSTRQ6ZN01 415 aa8.16□□□□□ -1.1
AP004242.1-201ENST00000533701 ZNF579Q8NAF0 562 aaKnown RBP8.15□□□□□ -1.1
AP004242.1-201ENST00000533701 FOXD4L1Q9NU39 408 aa8.15□□□□□ -1.1
AP004242.1-201ENST00000533701 FBLN2P98095 1184 aa8.11□□□□□ -1.11
AP004242.1-201ENST00000533701 ZRANB1Q9UGI0 708 aa8.11□□□□□ -1.11
AP004242.1-201ENST00000533701 CDAN1Q8IWY9 1227 aa8.1□□□□□ -1.11
AP004242.1-201ENST00000533701 PABPN1Q86U42 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
AP004242.1-201ENST00000533701 SCUBE2Q9NQ36 999 aa8.05□□□□□ -1.12
AP004242.1-201ENST00000533701 PHF12Q96QT6 1004 aa8.01□□□□□ -1.13
AP004242.1-201ENST00000533701 ZBTB22O15209 634 aa7.99□□□□□ -1.13
AP004242.1-201ENST00000533701 EHMT2Q96KQ7 1210 aa7.99□□□□□ -1.13
AP004242.1-201ENST00000533701 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
AP004242.1-201ENST00000533701 MMRN1Q13201 1228 aa7.98□□□□□ -1.13
AP004242.1-201ENST00000533701 SLC39A7Q92504 469 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms