RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 LRBAP50851 2863 aa3.38□□□□□ -1.87
USP38-203ENST00000511739 A8MUU9 505 aa3.37□□□□□ -1.87
USP38-203ENST00000511739 ITPR2Q14571 2701 aa3.37□□□□□ -1.87
USP38-203ENST00000511739 HRNRQ86YZ3 2850 aaPredicted RBP3.36□□□□□ -1.87
USP38-203ENST00000511739 COL6A5A8TX70 2615 aa3.36□□□□□ -1.87
USP38-203ENST00000511739 ZFHX4Q86UP3 3567 aa3.36□□□□□ -1.87
USP38-203ENST00000511739 APCP25054 2843 aa3.35□□□□□ -1.87
USP38-203ENST00000511739 KRTAP4-16G5E9R7 235 aaPredicted RBP3.35□□□□□ -1.87
USP38-203ENST00000511739 A0A087X002 238 aa3.35□□□□□ -1.87
USP38-203ENST00000511739 H3BS24 57 aa3.35□□□□□ -1.87
USP38-203ENST00000511739 Q5VV11 94 aa3.35□□□□□ -1.87
USP38-203ENST00000511739 NOTCH1P46531 2555 aa3.34□□□□□ -1.87
USP38-203ENST00000511739 CRYBG3Q68DQ2 2970 aa3.34□□□□□ -1.87
USP38-203ENST00000511739 TENM4Q6N022 2769 aa3.33□□□□□ -1.88
USP38-203ENST00000511739 KRTAP21-3Q3LHN1 58 aa3.33□□□□□ -1.88
USP38-203ENST00000511739 NSD1Q96L73 2696 aaPredicted RBP3.32□□□□□ -1.88
USP38-203ENST00000511739 TNP1P09430 55 aa3.32□□□□□ -1.88
USP38-203ENST00000511739 HIVEP1P15822 2718 aa3.32□□□□□ -1.88
USP38-203ENST00000511739 NBEAL2Q6ZNJ1 2754 aa3.31□□□□□ -1.88
USP38-203ENST00000511739 NBPF19A0A087WUL8 3843 aa3.31□□□□□ -1.88
USP38-203ENST00000511739 RELNP78509 3460 aa3.31□□□□□ -1.88
USP38-203ENST00000511739 RPS29P62273 56 aaKnown RBP3.31□□□□□ -1.88
USP38-203ENST00000511739 TACC2O95359 2948 aa3.3□□□□□ -1.88
USP38-203ENST00000511739 WDFY3Q8IZQ1 3526 aa3.3□□□□□ -1.88
USP38-203ENST00000511739 ZFHX3Q15911 3703 aa3.3□□□□□ -1.88
USP38-203ENST00000511739 ZANQ9Y493 2812 aa3.29□□□□□ -1.88
USP38-203ENST00000511739 CELSR2Q9HCU4 2923 aa3.27□□□□□ -1.89
USP38-203ENST00000511739 NIPBLQ6KC79 2804 aaeCLIP3.27□□□□□ -1.89
USP38-203ENST00000511739 KRTAP10-8P60410 259 aa3.26□□□□□ -1.89
USP38-203ENST00000511739 KRTAP16-1A8MUX0 517 aa3.26□□□□□ -1.89
USP38-203ENST00000511739 Q6ZRN7 208 aaPredicted RBP3.26□□□□□ -1.89
USP38-203ENST00000511739 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
USP38-203ENST00000511739 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
USP38-203ENST00000511739 A8MU10 97 aa3.25□□□□□ -1.89
USP38-203ENST00000511739 NOTCH2NLQ7Z3S9 236 aa3.24□□□□□ -1.89
USP38-203ENST00000511739 Q5XG85 94 aa3.24□□□□□ -1.89
USP38-203ENST00000511739 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
USP38-203ENST00000511739 KRTAP7-1Q8IUC3 87 aa3.23□□□□□ -1.89
USP38-203ENST00000511739 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
USP38-203ENST00000511739 KRTAP13-1Q8IUC0 172 aa3.22□□□□□ -1.89
USP38-203ENST00000511739 A0A1B0GVY2 172 aa3.21□□□□□ -1.89
USP38-203ENST00000511739 MXRA5Q9NR99 2828 aa3.2□□□□□ -1.9
USP38-203ENST00000511739 FBN2P35556 2912 aa3.2□□□□□ -1.9
USP38-203ENST00000511739 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
USP38-203ENST00000511739 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
USP38-203ENST00000511739 PRO2289Q9P1D8 64 aa3.19□□□□□ -1.9
USP38-203ENST00000511739 KRTAP10-10P60014 251 aa3.19□□□□□ -1.9
USP38-203ENST00000511739 NF1P21359 2839 aa3.19□□□□□ -1.9
USP38-203ENST00000511739 DCHS2Q6V1P9 2916 aa3.18□□□□□ -1.9
USP38-203ENST00000511739 CSMD1Q96PZ7 3565 aa3.18□□□□□ -1.9
USP38-203ENST00000511739 KRTAP11-1Q8IUC1 163 aa3.18□□□□□ -1.9
USP38-203ENST00000511739 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
USP38-203ENST00000511739 P0C880 135 aa3.16□□□□□ -1.9
USP38-203ENST00000511739 PDZD2O15018 2839 aa3.15□□□□□ -1.91
USP38-203ENST00000511739 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
USP38-203ENST00000511739 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
USP38-203ENST00000511739 OTOGQ6ZRI0 2925 aa3.13□□□□□ -1.91
USP38-203ENST00000511739 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
USP38-203ENST00000511739 XP32Q5T750 250 aa3.11□□□□□ -1.91
USP38-203ENST00000511739 FBN3Q75N90 2809 aa3.08□□□□□ -1.92
USP38-203ENST00000511739 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
USP38-203ENST00000511739 SPENQ96T58 3664 aaKnown RBP3.08□□□□□ -1.92
USP38-203ENST00000511739 BSNQ9UPA5 3926 aa3.06□□□□□ -1.92
USP38-203ENST00000511739 A6NN06 94 aa3.06□□□□□ -1.92
USP38-203ENST00000511739 TENM3Q9P273 2699 aa3.05□□□□□ -1.92
USP38-203ENST00000511739 FBN1P35555 2871 aaKnown RBP3.02□□□□□ -1.93
USP38-203ENST00000511739 TENM1Q9UKZ4 2725 aa3.02□□□□□ -1.93
USP38-203ENST00000511739 KRTAP1-4P0C5Y4 121 aa3.02□□□□□ -1.93
USP38-203ENST00000511739 TGP01266 2768 aa3.01□□□□□ -1.93
USP38-203ENST00000511739 ANK3Q12955 4377 aaKnown RBP2.99□□□□□ -1.93
USP38-203ENST00000511739 VWFP04275 2813 aa2.97□□□□□ -1.93
USP38-203ENST00000511739 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.93
USP38-203ENST00000511739 PKD1L1Q8TDX9 2849 aa2.96□□□□□ -1.94
USP38-203ENST00000511739 AKAP9Q99996 3911 aa2.94□□□□□ -1.94
USP38-203ENST00000511739 TENM2Q9NT68 2774 aa2.92□□□□□ -1.94
USP38-203ENST00000511739 H0YAA0 97 aa2.91□□□□□ -1.94
USP38-203ENST00000511739 ZNF469Q96JG9 3925 aaPredicted RBP2.9□□□□□ -1.94
USP38-203ENST00000511739 SVEP1Q4LDE5 3571 aa2.88□□□□□ -1.95
USP38-203ENST00000511739 VPS13CQ709C8 3753 aa2.87□□□□□ -1.95
USP38-203ENST00000511739 DNHD1Q96M86 4753 aa2.87□□□□□ -1.95
USP38-203ENST00000511739 KRTAP12-2P59991 146 aa2.87□□□□□ -1.95
USP38-203ENST00000511739 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.96
USP38-203ENST00000511739 TRRAPQ9Y4A5 3859 aa2.83□□□□□ -1.96
USP38-203ENST00000511739 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
USP38-203ENST00000511739 CUBNO60494 3623 aa2.8□□□□□ -1.96
USP38-203ENST00000511739 CRCT1Q9UGL9 99 aa2.79□□□□□ -1.96
USP38-203ENST00000511739 MEGF8Q7Z7M0 2845 aa2.77□□□□□ -1.97
USP38-203ENST00000511739 HUWE1Q7Z6Z7 4374 aaKnown RBP2.77□□□□□ -1.97
USP38-203ENST00000511739 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
USP38-203ENST00000511739 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
USP38-203ENST00000511739 KRTAP10-4P60372 401 aaPredicted RBP2.7□□□□□ -1.98
USP38-203ENST00000511739 KRTAP3-1Q9BYR8 98 aa2.7□□□□□ -1.98
USP38-203ENST00000511739 DNAH9Q9NYC9 4486 aa2.69□□□□□ -1.98
USP38-203ENST00000511739 KRTAP17-1Q9BYP8 105 aa2.67□□□□□ -1.98
USP38-203ENST00000511739 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
USP38-203ENST00000511739 SRRM2Q9UQ35 2752 aaKnown RBP2.67□□□□□ -1.98
USP38-203ENST00000511739 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
USP38-203ENST00000511739 ANK2Q01484 3957 aa2.66□□□□□ -1.98
USP38-203ENST00000511739 PRKDCP78527 4128 aaKnown RBP2.65□□□□□ -1.98
USP38-203ENST00000511739 MT1HL1P0DM35 61 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms