RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 GNG13Q9P2W3 67 aa-0.22□□□□□ -2.44
GYPB-201ENST00000429670 S4R3F8 94 aa-0.22□□□□□ -2.44
GYPB-201ENST00000429670 UTP20O75691 2785 aaKnown RBP-0.22□□□□□ -2.44
GYPB-201ENST00000429670 CROCC2H7BZ55 1655 aa-0.22□□□□□ -2.44
GYPB-201ENST00000429670 WDR87Q6ZQQ6 2873 aa-0.22□□□□□ -2.44
GYPB-201ENST00000429670 DNAH3Q8TD57 4116 aa-0.22□□□□□ -2.45
GYPB-201ENST00000429670 PKHD1L1Q86WI1 4243 aa-0.22□□□□□ -2.45
GYPB-201ENST00000429670 ABCC6O95255 1503 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 ITPR3Q14573 2671 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 ATXN8Q156A1 80 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 MINOS1Q5TGZ0 78 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 NCBP2-AS2Q69YL0 99 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 SPRR2FQ96RM1 72 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 LAMA5O15230 3695 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 DUOX2Q9NRD8 1548 aa-0.23□□□□□ -2.45
GYPB-201ENST00000429670 FAM186AA6NE01 2351 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 CCDC168Q8NDH2 2452 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 ETDCA0A1B0GVM5 59 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 FCER1GP30273 86 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 CRIP1P50238 77 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 DEFB110Q30KQ9 67 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 DNAH9Q9NYC9 4486 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 DNMBPQ6XZF7 1577 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 ABCA6Q8N139 1617 aa-0.24□□□□□ -2.45
GYPB-201ENST00000429670 RANBP2P49792 3224 aaKnown RBP-0.25□□□□□ -2.45
GYPB-201ENST00000429670 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 LAMA1P25391 3075 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 C9orf92A6NGG3 77 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 SFTA3P0C7M3 94 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 ANK3Q12955 4377 aaKnown RBP-0.25□□□□□ -2.45
GYPB-201ENST00000429670 USH2AO75445 5202 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 ACACBO00763 2458 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 UBR4Q5T4S7 5183 aa-0.25□□□□□ -2.45
GYPB-201ENST00000429670 A0A0C4DFX4 3053 aa-0.26□□□□□ -2.45
GYPB-201ENST00000429670 NBEAL2Q6ZNJ1 2754 aa-0.26□□□□□ -2.45
GYPB-201ENST00000429670 SMCO4Q9NRQ5 59 aa-0.26□□□□□ -2.45
GYPB-201ENST00000429670 MGAM2Q2M2H8 2515 aa-0.26□□□□□ -2.45
GYPB-201ENST00000429670 NBEAQ8NFP9 2946 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 EFCAB5A4FU69 1503 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 TRIOO75962 3097 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 RPS27P42677 84 aaKnown RBP-0.27□□□□□ -2.45
GYPB-201ENST00000429670 RPS27LQ71UM5 84 aaKnown RBP-0.27□□□□□ -2.45
GYPB-201ENST00000429670 C6orf48Q9UBA6 75 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 ALS2Q96Q42 1657 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 HERC1Q15751 4861 aa-0.27□□□□□ -2.45
GYPB-201ENST00000429670 GLI2P10070 1586 aa-0.28□□□□□ -2.45
GYPB-201ENST00000429670 TLN2Q9Y4G6 2542 aa-0.28□□□□□ -2.45
GYPB-201ENST00000429670 TIAM1Q13009 1591 aa-0.28□□□□□ -2.45
GYPB-201ENST00000429670 MT1AP04731 61 aa-0.29□□□□□ -2.46
GYPB-201ENST00000429670 WT1-ASQ06250 92 aa-0.29□□□□□ -2.46
GYPB-201ENST00000429670 STARD9Q9P2P6 4700 aa-0.29□□□□□ -2.46
GYPB-201ENST00000429670 APOBP04114 4563 aaKnown RBP-0.3□□□□□ -2.46
GYPB-201ENST00000429670 FAM208AQ9UK61 1670 aaKnown RBP-0.3□□□□□ -2.46
GYPB-201ENST00000429670 VPS13DQ5THJ4 4388 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 PDCD5O14737 125 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 DEFB114Q30KQ6 69 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 KRTAP20-2Q3LI61 65 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.3□□□□□ -2.46
GYPB-201ENST00000429670 CLASP1Q7Z460 1538 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 HERC2O95714 4834 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 MACF1Q9UPN3 7388 aaKnown RBP-0.3□□□□□ -2.46
GYPB-201ENST00000429670 TEX15Q9BXT5 2789 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 RIF1Q5UIP0 2472 aaKnown RBP-0.3□□□□□ -2.46
GYPB-201ENST00000429670 DNAH11Q96DT5 4516 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 MROH2AA6NES4 1674 aa-0.3□□□□□ -2.46
GYPB-201ENST00000429670 UGGT1Q9NYU2 1555 aa-0.31□□□□□ -2.46
GYPB-201ENST00000429670 LINC01549A6NIU2 74 aa-0.32□□□□□ -2.46
GYPB-201ENST00000429670 C5orf42Q9H799 3197 aa-0.32□□□□□ -2.46
GYPB-201ENST00000429670 DNAH2Q9P225 4427 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 SACSQ9NZJ4 4579 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 M0R1W7 72 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 EEA1Q15075 1411 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 EFCAB6Q5THR3 1501 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 ABCA10Q8WWZ4 1543 aa-0.33□□□□□ -2.46
GYPB-201ENST00000429670 IGLV5-48A0A075B6I7 105 aa-0.34□□□□□ -2.46
GYPB-201ENST00000429670 H3BUA1 57 aa-0.34□□□□□ -2.46
GYPB-201ENST00000429670 MUC17Q685J3 4493 aa-0.34□□□□□ -2.46
GYPB-201ENST00000429670 LMO7Q8WWI1 1683 aa-0.34□□□□□ -2.46
GYPB-201ENST00000429670 FAT1Q14517 4588 aa-0.34□□□□□ -2.46
GYPB-201ENST00000429670 EPPK1P58107 5090 aaKnown RBP-0.34□□□□□ -2.46
GYPB-201ENST00000429670 FRYQ5TBA9 3013 aa-0.35□□□□□ -2.46
GYPB-201ENST00000429670 USP9XQ93008 2570 aaPredicted RBP-0.35□□□□□ -2.46
GYPB-201ENST00000429670 DNAH1Q9P2D7 4330 aa-0.35□□□□□ -2.47
GYPB-201ENST00000429670 COL12A1Q99715 3063 aa-0.35□□□□□ -2.47
GYPB-201ENST00000429670 K7EMI3 77 aa-0.35□□□□□ -2.47
GYPB-201ENST00000429670 MAST1Q9Y2H9 1570 aa-0.36□□□□□ -2.47
GYPB-201ENST00000429670 NIPBLQ6KC79 2804 aaeCLIP-0.36□□□□□ -2.47
GYPB-201ENST00000429670 TNP1P09430 55 aa-0.36□□□□□ -2.47
GYPB-201ENST00000429670 MT4P47944 62 aa-0.36□□□□□ -2.47
GYPB-201ENST00000429670 RYR1P21817 5038 aa-0.36□□□□□ -2.47
GYPB-201ENST00000429670 PREX2Q70Z35 1606 aa-0.36□□□□□ -2.47
GYPB-201ENST00000429670 SPTAN1Q13813 2472 aaKnown RBP-0.37□□□□□ -2.47
GYPB-201ENST00000429670 DNAH7Q8WXX0 4024 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 CPS1P31327 1500 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 NOP10Q9NPE3 64 aaKnown RBP-0.37□□□□□ -2.47
GYPB-201ENST00000429670 KAAG1Q9UBP8 84 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 RELNP78509 3460 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 DOPEY1Q5JWR5 2465 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 PRXQ9BXM0 1461 aa-0.37□□□□□ -2.47
GYPB-201ENST00000429670 CMYA5Q8N3K9 4069 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms